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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4608 cluster # 4608       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4608#0 length = 635 sequences # 3  

consensusID : consensus_4608#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 635
fasta sequence
                              [TTTTTTTTTTTTTTTTCAAAACAAATCGATTCATTTATGAGGTACGTTGACTCATTCTCACATTACAGTTTATCTAAACAGCTGAAACCTATTCA-GAGTCCCCAAATTCTCAATCCAGGCACAAGCGTTTTTACGGTTCGTGAACATATTTGTCTTTTCAAACTAAAACAAACCAATACAAAGTTCAGGAGCGTGGAACTCCAATTCTTCAGAGCAAATCAGGCGGTCTCCTTGGGGGATTCAGCGTTGACGTACGCGAGGAACTCCTTGAGGTGCTGGTTGTAGACGCAGGGCCTCTCTATGTGAACCAGGTGCCCTGCCTTGCTGATGCTCTGCAGCATTGCCTTCTCTCCGAGCTGCTCTTTCATCGTCATGGCGAGCTCAATGTTGAAAATGTNGTCGTTCTCCCCCCATAGCAGGAGTATTTTCTGCGGCAGAACGGGNACGGTGGCGTCTTTGTTGCTGACCACCAAACCTTCCAGCAGCTCGGCTCTTTCCTTTCGGTTGGTGAACATCACCTCGAGGTAGTCTCTGTGAATGCGGTCAGGGAACCAGAGCTTCCTGTGGGTGGCAATGGAGAGCAGCGCCTTGAGTCCCTTGACGGTCTCCGGCAGCAGCAGCTCGGCCGACGACTT]

[-] EMBL AU100634             [TTTTTTTTTTTTTTTTCAAAACAAATCGATTCATTTATGAGGTACGTTGACTCATTCTCACATTACAGTTTATCTAAACAGCTGAAACCTATTCA GAGTCCCCAAATTCTCAATCCAGGCACAAGCGTTTTTACGGTTCGTGAACATATTTGTCTTTTCAAACTAAAACAAACCAATACAAAGTTCAGGAGCGTGGAACTCCAATTCTTCAGAGCAAATCAGGCGGTCTCCTTGGGGGATTCAGCGTTGACGTACGCGAGGAACTCCTTGAGGTGCTGGTTGTAGACGCAGGGCCTCTCTATGTGAACCAGGTGCCCTGCCTTGCTGATGCTCTGCAGCATTGCCTTCTCTCCGAGCTGCTCTTTCATCGTCATGGCGAGCTCAATGTTGAAAATGTNGTCGTTCTCCCCCCATAGCAGGAGTATTTTCTGCGGCAGAACGGGNACGGTGGCGTCTTTGTTGCTGACCACCAAACCTTCCAGCAGCTCGGCTCTTTCCTTTCGGTTGGTGAACATCACCTCGAGGTAGTCTCTGTGAATGCGGTCAGGGAACCAGAGCTTCCTGTG                                                                     ]
[-] EMBL AU222503             [           TTTTTCAAAACAAATCGATTCATTTATGAGGTACGTTGACTCATTCTCACATTACAGTTTATCTAAACAGCTGAAACCTATTCAGGAGTCCCCAAATTCTCAATCCAGGCACANGCGTTTTTACGGTTCGNGAACATATTTGTCTTTTCAAACTAAAACAAACCAATACAAAGTTCAGGAGCGNGGAACTCCAATTCTTCAGAGCAAATCAGGCGGTCTCCTTGGGGGATTCAGCGTTGACGTACGCGAGGAACTCCTTGAGGTGCTGGTTGTANAC                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF326526             [          gagggTCAAAACAAATCGATTCATTTATGAGGTACGTTGACTCATTCTCACATTACAGTTTATCTAAACAGCTGAAACCTATTCA GAGTCCCCAAATTCTCAATCCAGGCACAAGCGTTTTTACGGTTCGTGAACTTTTTTGTCTTTTCAAACTAAAACAAACCAATACAAAGTTCAGGATCGTGGAACTCCAATTCTTCAGAGCAAATCAGGCGGTCTCCTTGGGGGATTCAGCGTTGACGTACGCGAGGAACTCCTTGAGGTGCTGGTTGTAGACGCAGGGCCTCTCTATGTGAACCAGGTGCCCTGCCTTGCTGATGCTCTGCAGCATTGCCTTCTCTCCGAGCTGCTCTTTCATCGTCATGGCGAGCTCAATGTTGAAAATGTTGTCGTTCTCCCCCCATAGCAGGAGTATTTTCTGCGGCAGAACGGGCACGGTGGCGTCTTTGTTGCTGACCACCAAACCTTCCAGCAGCTCGGCTCTTTCCTTTCGGTTGGTGAACATCACCTCGAGGTAGTCTCTGTGAATGCGGTCAGGGAACCAGAGCTTCCTGTGGGTGGCAATGGAGAGCAGCGCCTTGAGTCCCTTGACGGTCTCCGGCAGCAGCAGCTCGGCCGACGACTT]


>consensus_4608#0 TTTTTTTTTTTTTTTTCAAAACAAATCGATTCATTTATGAGGTACGTTGACTCATTCTCA CATTACAGTTTATCTAAACAGCTGAAACCTATTCAGAGTCCCCAAATTCTCAATCCAGGC ACAAGCGTTTTTACGGTTCGTGAACATATTTGTCTTTTCAAACTAAAACAAACCAATACA AAGTTCAGGAGCGTGGAACTCCAATTCTTCAGAGCAAATCAGGCGGTCTCCTTGGGGGAT TCAGCGTTGACGTACGCGAGGAACTCCTTGAGGTGCTGGTTGTAGACGCAGGGCCTCTCT ATGTGAACCAGGTGCCCTGCCTTGCTGATGCTCTGCAGCATTGCCTTCTCTCCGAGCTGC TCTTTCATCGTCATGGCGAGCTCAATGTTGAAAATGTNGTCGTTCTCCCCCCATAGCAGG AGTATTTTCTGCGGCAGAACGGGNACGGTGGCGTCTTTGTTGCTGACCACCAAACCTTCC AGCAGCTCGGCTCTTTCCTTTCGGTTGGTGAACATCACCTCGAGGTAGTCTCTGTGAATG CGGTCAGGGAACCAGAGCTTCCTGTGGGTGGCAATGGAGAGCAGCGCCTTGAGTCCCTTG ACGGTCTCCGGCAGCAGCAGCTCGGCCGACGACTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)