cluster # 4611

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Oryza sativa
cluster # 4611 cluster # 4611 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4611#0 length = 1957 sequences # 3
consensusID : consensus_4611#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1957
fasta sequence
                              [CTCATCGTAGAAATCGCGATCGCCATACTTGACCTTGCAGAGCTCTGTCTCTGTCTCTCGCTCTGATTGAAGTGTTCTGCTGCCATCTCTCTCCCGCTTCTGTCTCCGTGTGTGCATATATATATGCTGTATTGGGGACGTTGCGGCAGCGGTTCTTGGGTACATGGCCTACTCCTCACGGTCTTGTGATCAGTGCAGTCACGAGAGGAGATCCGGCTTCATGAAGTGGCTCTGCGCTTTCCTGAAGGGGACGAAGGACGGCGAGGCCAACCGACGGCGCCCTCGGGTGACGGCAGGAGAAGAGACCACGCTCTGGGAAGAACCAGTTAGACCAAAGAAGGAAGAACCACCTAGACATAACAATGAAGAAATGGACCATGCACTTGCCCTTGCTCTTGCAGACGATGCCAAAAATACAAAAGAGAGAAACCATGACAAGGGAGAAAACGATGAAGAACTCGCTAGAGCAATACAGGACAGTCTGAACATGAATCCTTACCAGCCTTACAATCCTTGTGCACCCTCTCAGACCCAGGCCAGGTCGAGAGGATACAGGGTCTGTGGGGGTTGCAAGCATGAGATAGGGCATGGCCATTACTTGAGCTGCTTGGGAATGTACTGGCACCCTCAGTGCTTCCGCTGTTCTTCCTGTCGCCACCCTATCCGTGAGATGGAGTTCACCTTGCTAGGTACAGATCCATACCACAAGCTGTGCTACAAGGAGCTTCATCACCCAAAGTGTGACGTCTGCCTTCAATTTATCCCAACGAACAGGACTGGTTTGATAGAGTACAGAGCCCATCCATTCTGGGGACAGAAGTATTGTCCTTTGCATGAGCATGATAGAACACCTCGTTGCTGTAGCTGTGAGAAAATGGAGCCAAGGAACACAAAGTATATGTCATTAGGGGATGGACGCAGCTTGTGCATGGAATGCCTGGATTCTGCAATCATGGACACCGGTGAATGTCAACCGCTATACGATTCCATCAGAGACTACTACGAAGGGATGAACATGAAACTAGACCAGCAGATACCCATGCTCTTGGTTGAACGTCAAGCCCTTAATGAAGCTATGGAAGGAGAAAGCAAAGGACCGCATCATATGCCTGAAACACGAGGCCTTTGTCTGTCAGAGGAGCAGACTGTGACCAGTATACTTAGGAGGCCCAGAATTGGTGCAAATCGGTTACTAGATATGAAAACCCAACCGCAAAAGCTAACTAGGAGATGCGAAGTCACTGCAATTCTTGTATTGTTTGGCCTCCCCAGGCTGCTAACGGGCTCCATTCTTGCCCATGAATTGATGCATGGGTGGTTGCGCCTCAAAGGTTACCGGAACCTAAAGGCGGAGATTGAGGAAGGTATATGCCAGGTCATGTCTTACCTGTGGCTGGAGTCAGAGATCCTTCCATCCACTTCAAGATATGGACAGGCTTCAAC-ATCTTACGCTTCATCTTCGTCGTCCTCCTGTCGACCACCACCGTCCAAGAAGGGTGGGATCTCTCACACCGAGAAGAAGCTTGGAGAATTCTTCCTGCATCAGATCGCCAATGACACATCATCAGCATACGGCGATGGTTTCAGAGCTGCCTATGCAGCTGTGAACAAGTATGGCCTTCGCCAATCACTGAACCATATACGGCTAACCGGAGGCTTTCCTGTGTAACACAAGAAAGCGCTGTCTATCAGTCTATGTCCATACTGGATGCGGGTATACAGATATCATACACACATACATATGGAGATCATATGGGTTATGGTAATGGAGTAAGATTTCGGATTTGGGTGACCTTGAGTTTTCAGAGAGGTCCTATCAGAGTAAATCAGTTAAGGAACTGCATTTGCTCGAATTAACA-GGAGCTGAGGTTGCAATCTAATAAGGTGACTAAGAAACACTAATGTAATGCACAGTATGGCCCATGATAATGCAGTG--GTATTTTATATAAAAAAAAAA]

[+] EMBL AK069586             [CTCATCGTAGAAATCGCGATCGCCATACTTGACCTTGCAGAGCTCTGTCTCTGTCTCTCGCTCTGATTGAAGTGTTCTGCTGCCATCTCTCTCCCGCTTCTGTCTCCGTGTGTGCATATATATATGCTGTATTGGGGACGTTGCGGCAGCGGTTCTTGGGTACATGGCCTACTCCTCACGGTCTTGTGATCAGTGCAGTCACGAGAGGAGATCCGGCTTCATGAAGTGGCTCTGCGCTTTCCTGAAGGGGACGAAGGACGGCGAGGCCAACCGACGGCGCCCTCGGGTGACGGCAGGAGAAGAGACCACGCTCTGGGAAGAACCAGTTAGACCAAAGAAGGAAGAACCACCTAGACATAACAATGAAGAAATGGACCATGCACTTGCCCTTGCTCTTGCAGACGATGCCAAAAATACAAAAGAGAGAAACCATGACAAGGGAGAAAACGATGAAGAACTCGCTAGAGCAATACAGGACAGTCTGAACATGAATCCTTACCAGCCTTACAATCCTTGTGCACCCTCTCAGACCCAGGCCAGGTCGAGAGGATACAGGGTCTGTGGGGGTTGCAAGCATGAGATAGGGCATGGCCATTACTTGAGCTGCTTGGGAATGTACTGGCACCCTCAGTGCTTCCGCTGTTCTTCCTGTCGCCACCCTATCCGTGAGATGGAGTTCACCTTGCTAGGTACAGATCCATACCACAAGCTGTGCTACAAGGAGCTTCATCACCCAAAGTGTGACGTCTGCCTTCAATTTATCCCAACGAACAGGACTGGTTTGATAGAGTACAGAGCCCATCCATTCTGGGGACAGAAGTATTGTCCTTTGCATGAGCATGATAGAACACCTCGTTGCTGTAGCTGTGAGAAAATGGAGCCAAGGAACACAAAGTATATGTCATTAGGGGATGGACGCAGCTTGTGCATGGAATGCCTGGATTCTGCAATCATGGACACCGGTGAATGTCAACCGCTATACGATTCCATCAGAGACTACTACGAAGGGATGAACATGAAACTAGACCAGCAGATACCCATGCTCTTGGTTGAACGTCAAGCCCTTAATGAAGCTATGGAAGGAGAAAGCAAAGGACCGCATCATATGCCTGAAACACGAGGCCTTTGTCTGTCAGAGGAGCAGACTGTGACCAGTATACTTAGGAGGCCCAGAATTGGTGCAAATCGGTTACTAGATATGAAAACCCAACCGCAAAAGCTAACTAGGAGATGCGAAGTCACTGCAATTCTTGTATTGTTTGGCCTCCCCAGGCTGCTAACGGGCTCCATTCTTGCCCATGAATTGATGCATGGGTGGTTGCGCCTCAAAGGTTACCGGAACCTAAAGGCGGAGATTGAGGAAGGTATATGCCAGGTCATGTCTTACCTGTGGCTGGAGTCAGAGATCCTTCCATCCACTTCAAGATATGGACAGGCTTCAAC ATCTTACGCTTCATCTTCGTCGTCCTCCTGTCGACCACCACCGTCCAAGAAGGGTGGGATCTCTCACACCGAGAAGAAGCTTGGAGAATTCTTCCTGCATCAGATCGCCAATGACACATCATCAGCATACGGCGATGGTTTCAGAGCTGCCTATGCAGCTGTGAACAAGTATGGCCTTCGCCAATCACTGAACCATATACGGCTAACCGGAGGCTTTCCTGTGTAACACAAGAAAGCGCTGTCTATCAGTCTATGTCCATACTGGATGCGGGTATACAGATATCATACACACATACATATGGAGATCATATGGGTTATGGTAATGGAGTAAGATTTCGGATTTGGGTGACCTTGAGTTTTCAGAGAGGTCCTATCAGAGTAAATCAGTTAAGGAACTGCATTTGCTCGAATTAACA GGAGCTGAGGTTGCAATCTAATAAGGTGACTAAGAAACACTAATGTAATGCACAGTATGGCCCATGATAATGCAGTG                       ]
[+] EMBL CB640602             [                                                                                                                                                                                                            GAGGAGATCCGGCTTCATGAAGTGGCTCTGCGCTTTCCTGAAGGGGACGAAGGACGGCGAGGCCAACCGACGGCGCCCTCGGGTGACGGCAGGAGAAGAGACCACGCTCTGGGAAGAACCAGTTAGACCAAAGAAGGAAGAACCACCTAGACATAACAATGAAGAAATGGACCATGCACTTGCCCTTGCTCTTGCAGACGATGCCAAAAATACAAAAGAGAGAAACCCTGACAAGGGAGAAAACGATGAAGAACTCGCTAGAGCAATACAGGACAGTCTGAACATGAATCCTTACCTGCCTTACAATCCTTGTGCACCCTCTCAGACCCAAGCCAGGTCGAGAGGATACAAGGTCTGTGGGGGTTGCAAGCATGAGATAAGGCATGGCCATTACTTGAGCTGCTTGGGAATGTACTGGCACCCTCAGTGCTTCCGCTGTTCTTCCTGTCGCCACCCTATCCGTGAGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI806622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATATGGACAGGCTTCAACAATCTTACGCGTCATCTTCGTCGTCCTCCTGTCGACCACCACCGTCCAAGAAGGGTGGGATCTCTCACACCGAGAAGAAGCTTGGAGAATTCTTCCTGCATCAGATCGCC ATGACACATCATCAGCATACGGCGATGGTTTCAGAGCTGCCTATGCAGCTGTGAACAAGTAT GCCTTCGCCGATCACTGAACCATATACGGCTAACCGGAGGCTTTCCTGTGTAACACAAGAAAGCACTGTCTATCAGTCTATGTCCATACTGGATGCGGGTATACAGATATCATACACACATACATATGGAGATCATATGGGTTATGGTAATGGAGTAAGATTTCGGATTTGGGTGACCTTGAGTTTTCAGAGAGGTCCTATCAGAGTAAATCAGTTAAGGAACTGCATTTGCTCGAATTAACACGGAGCTGAGGTT C ATCTAATAAGGTGACTAAGAAAC CTAATGTAATGCAC GTATGGCCCATGATAAT C GTGAAGTATTTTATATAAAAAAAAAA]




>consensus_4611#0
CTCATCGTAGAAATCGCGATCGCCATACTTGACCTTGCAGAGCTCTGTCTCTGTCTCTCG
CTCTGATTGAAGTGTTCTGCTGCCATCTCTCTCCCGCTTCTGTCTCCGTGTGTGCATATA
TATATGCTGTATTGGGGACGTTGCGGCAGCGGTTCTTGGGTACATGGCCTACTCCTCACG
GTCTTGTGATCAGTGCAGTCACGAGAGGAGATCCGGCTTCATGAAGTGGCTCTGCGCTTT
CCTGAAGGGGACGAAGGACGGCGAGGCCAACCGACGGCGCCCTCGGGTGACGGCAGGAGA
AGAGACCACGCTCTGGGAAGAACCAGTTAGACCAAAGAAGGAAGAACCACCTAGACATAA
CAATGAAGAAATGGACCATGCACTTGCCCTTGCTCTTGCAGACGATGCCAAAAATACAAA
AGAGAGAAACCATGACAAGGGAGAAAACGATGAAGAACTCGCTAGAGCAATACAGGACAG
TCTGAACATGAATCCTTACCAGCCTTACAATCCTTGTGCACCCTCTCAGACCCAGGCCAG
GTCGAGAGGATACAGGGTCTGTGGGGGTTGCAAGCATGAGATAGGGCATGGCCATTACTT
GAGCTGCTTGGGAATGTACTGGCACCCTCAGTGCTTCCGCTGTTCTTCCTGTCGCCACCC
TATCCGTGAGATGGAGTTCACCTTGCTAGGTACAGATCCATACCACAAGCTGTGCTACAA
GGAGCTTCATCACCCAAAGTGTGACGTCTGCCTTCAATTTATCCCAACGAACAGGACTGG
TTTGATAGAGTACAGAGCCCATCCATTCTGGGGACAGAAGTATTGTCCTTTGCATGAGCA
TGATAGAACACCTCGTTGCTGTAGCTGTGAGAAAATGGAGCCAAGGAACACAAAGTATAT
GTCATTAGGGGATGGACGCAGCTTGTGCATGGAATGCCTGGATTCTGCAATCATGGACAC
CGGTGAATGTCAACCGCTATACGATTCCATCAGAGACTACTACGAAGGGATGAACATGAA
ACTAGACCAGCAGATACCCATGCTCTTGGTTGAACGTCAAGCCCTTAATGAAGCTATGGA
AGGAGAAAGCAAAGGACCGCATCATATGCCTGAAACACGAGGCCTTTGTCTGTCAGAGGA
GCAGACTGTGACCAGTATACTTAGGAGGCCCAGAATTGGTGCAAATCGGTTACTAGATAT
GAAAACCCAACCGCAAAAGCTAACTAGGAGATGCGAAGTCACTGCAATTCTTGTATTGTT
TGGCCTCCCCAGGCTGCTAACGGGCTCCATTCTTGCCCATGAATTGATGCATGGGTGGTT
GCGCCTCAAAGGTTACCGGAACCTAAAGGCGGAGATTGAGGAAGGTATATGCCAGGTCAT
GTCTTACCTGTGGCTGGAGTCAGAGATCCTTCCATCCACTTCAAGATATGGACAGGCTTC
AACATCTTACGCTTCATCTTCGTCGTCCTCCTGTCGACCACCACCGTCCAAGAAGGGTGG
GATCTCTCACACCGAGAAGAAGCTTGGAGAATTCTTCCTGCATCAGATCGCCAATGACAC
ATCATCAGCATACGGCGATGGTTTCAGAGCTGCCTATGCAGCTGTGAACAAGTATGGCCT
TCGCCAATCACTGAACCATATACGGCTAACCGGAGGCTTTCCTGTGTAACACAAGAAAGC
GCTGTCTATCAGTCTATGTCCATACTGGATGCGGGTATACAGATATCATACACACATACA
TATGGAGATCATATGGGTTATGGTAATGGAGTAAGATTTCGGATTTGGGTGACCTTGAGT
TTTCAGAGAGGTCCTATCAGAGTAAATCAGTTAAGGAACTGCATTTGCTCGAATTAACAG
GAGCTGAGGTTGCAATCTAATAAGGTGACTAAGAAACACTAATGTAATGCACAGTATGGC
CCATGATAATGCAGTGGTATTTTATATAAAAAAAAAA
clustalw multiple alignements is not computed in this case