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Oryza sativa
cluster # 462 cluster # 462       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_462#0 length = 2261 sequences # 2  

consensusID : consensus_462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2261
fasta sequence
                              [CAGGCCATCCCACCGAGCGTACCATACACTACTGATACGCACACCTAGAGCAAGTTGAGCGAGCCATGGCGCTGGTGGCTGAGGCGATGGGGAGCCTTGTCCCCAAACTGACCGAGCTGCTCAAAGAGGAGTACAAGCTGCAAACGGGCGTTAGGGAGAAAATCAATTTTCTCAAGAGTGAGCTCGAGGACATGCATGCTGCCCTTCGCAAGGTTGGCAGCATGCATCCCGACCTGCTTGATGAGCAGGTCAGGATTTGGGCAAGCAAAGTCCGGGAGCTGTCGTATGACATGGAGGACGTCATCGACGCCTTTCTGGTGCGTGTAGATGGCAGTGTGCCTGCCAACCCCGGTTGCCTCGAACGGCTTGTGCACATGATGTGCGGCTTGTTCACCAAGATCAAGGTTCGCCATCAGATATCTGGCGTCGTCCAAGACATCAACACCAAACTAGAGGAGGTGTCCAAGGCGCGTGAAAGATACATAGCCTCTGATCTTCAGGCTAACCTAGCTGCCACACAATTGTCCACCCATGATCCTCGCATCCTGTTATCGAATACAGATGCGGCAAAGCTTGTTGGTATTGATGGCACAAGGAATGACATCATAAAGATCCTTTCCCTGGAGGGTGACAACTTGCCCTTGGGGAAGATGATAAAAGTTTCCATTGTTGGATCCGGGGGAATGGGCAAAACCACTCTCTCCAGAGCAGTGTACGACAGTGTTAAGGGGAAATTCCAATGCTCGGCATTTGTGCCAGTTGGCCAGAATCAAGACTTGAAGAGGGTCTTCATGGACGTTCTAAATGATCTTGACAAGGAAAAGTTCGACAATATCCATAGCACAAAAAAGGATGTAAGGTTACTCATGAACGAGGTCTACGACTTCCTTGAAAACAAGAGGTACATCATTGTTATTGATGACATTTGGAAATTCGATGCTTGGGACATGATTGCAAAAGTCCTGGGAGACAGTAGTTGTGGAAGTAGAGTGATCATAACTACTCGTATTTCTGAAATTGCTGAGGAAGTCGGTCATGTTTATGAAATAAAACACCTTTCTGATGTTGACTCGAGAAGGTTATTGCATAGAAGAATATTAAGTGGTGAAGACCAATGCCCCGTTGATGATTATGATTTGGAAGAGGTTTGTGATGAAATTTTGAGGAAATGTGAAGGGGTACCATTGGCCATTGTTACAACGTCTAGTTTGTTGGAGAGTAAACCAAGGGAGGACTGGTCTGAGTTGTATCGGTCAATTGCTCTTGGCGCAAAAGACAACCGGCATGTGGATAATACTATGAAGATATGGTCTCTTAGTTTCTATCATTTGCCTTATCATCTAAGAACATGCTTATTGTACTTGAGCGCATTTCCAGAGGATTATTTAATTGGTAAACAAACATTGATATGGAGGTGGATAGGTGAAGGTTTTGTCTGTAAGGAAGAAGGAAGAGACTTATATGAGGTGTGAGAGGGTTACTTCAACGAGCTTGTAAAACGACGTATGATCATGCCAATAGAGGCAGAGAATGAAGACTACATACTAGGCTGTCGTGTTCATGACATGGTGCTCGGTCTGATCCGGTCATTGTCAAGCAGTGAAAACTTTGTCACCGTATTGGGTATAGAACAATACAACACATCTCACCAGGGCTATGGTCGAAGGATAGCCATCCTAAGCAGCAAGAATGGATTACCCCCAGTGGTGAACCTGGGAACGGCACAGTCACAAGTGACAATCCGGTCATTTAGTGCCAATGGTTTGTCATACATAGATGTTCTGCCAACACCGGCGAAATTTGAAGCTGTGCGTGTACTGGCACTGCAAAATTGTGAATCATTGCAGGACCTTCACGGCCTGGAGCATATTGGCAGTTTACTTCACCTACGATACCTTGCACTGACGTACACACCTCTTTCTGAGCTCCCAAATGGAATAGCGGGACGTCTGAGGTTCCTAGAGACGCTGGATCTGTGGGGGACTGGCATAGAGCAAGTGCCGTCGAGCGTGGGCAAGTTGACACAGTTGCTGTGCCTACAAGCCGATATTAAAACAAGGGTGCCGGATTGGATCGGGAACCTGACGTCCCTGCAAGAGTTGTGGATGTGGCCTGATGCTGCAGCTGCAGGGCAGTTTGTGAAGGAGCTGGGCAAGCTCGAGGATCTGAGGGTGCTCTGTACTCAGTTCGAGGGTGCCCCCGCAACGGACATTATCGAGTCTCTAGGAAGTCTGCCCAAGATACAGAAAATGCACGCCTTT]

[+] EMBL AK101846             [CAGGCCATCCCACCGAGCGTACCATACACTACTGATACGCACACCTAGAGCAAGTTGAGCGAGCCATGGCGCTGGTGGCTGAGGCGATGGGGAGCCTTGTCCCCAAACTGACCGAGCTGCTCAAAGAGGAGTACAAGCTGCAAACGGGCGTTAGGGAGAAAATCAATTTTCTCAAGAGTGAGCTCGAGGACATGCATGCTGCCCTTCGCAAGGTTGGCAGCATGCATCCCGACCTGCTTGATGAGCAGGTCAGGATTTGGGCAAGCAAAGTCCGGGAGCTGTCGTATGACATGGAGGACGTCATCGACGCCTTTCTGGTGCGTGTAGATGGCAGTGTGCCTGCCAACCCCGGTTGCCTCGAACGGCTTGTGCACATGATGTGCGGCTTGTTCACCAAGATCAAGGTTCGCCATCAGATATCTGGCGTCGTCCAAGACATCAACACCAAACTAGAGGAGGTGTCCAAGGCGCGTGAAAGATACATAGCCTCTGATCTTCAGGCTAACCTAGCTGCCACACAATTGTCCACCCATGATCCTCGCATCCTGTTATCGAATACAGATGCGGCAAAGCTTGTTGGTATTGATGGCACAAGGAATGACATCATAAAGATCCTTTCCCTGGAGGGTGACAACTTGCCCTTGGGGAAGATGATAAAAGTTTCCATTGTTGGATCCGGGGGAATGGGCAAAACCACTCTCTCCAGAGCAGTGTACGACAGTGTTAAGGGGAAATTCCAATGCTCGGCATTTGTGCCAGTTGGCCAGAATCAAGACTTGAAGAGGGTCTTCATGGACGTTCTAAATGATCTTGACAAGGAAAAGTTCGACAATATCCATAGCACAAAAAAGGATGTAAGGTTACTCATGAACGAGGTCTACGACTTCCTTGAAAACAAGAGGTACATCATTGTTATTGATGACATTTGGAAATTCGATGCTTGGGACATGATTGCAAAAGTCCTGGGAGACAGTAGTTGTGGAAGTAGAGTGATCATAACTACTCGTATTTCTGAAATTGCTGAGGAAGTCGGTCATGTTTATGAAATAAAACACCTTTCTGATGTTGACTCGAGAAGGTTATTGCATAGAAGAATATTAAGTGGTGAAGACCAATGCCCCGTTGATGATTATGATTTGGAAGAGGTTTGTGATGAAATTTTGAGGAAATGTGAAGGGGTACCATTGGCCATTGTTACAACGTCTAGTTTGTTGGAGAGTAAACCAAGGGAGGACTGGTCTGAGTTGTATCGGTCAATTGCTCTTGGCGCAAAAGACAACCGGCATGTGGATAATACTATGAAGATATGGTCTCTTAGTTTCTATCATTTGCCTTATCATCTAAGAACATGCTTATTGTACTTGAGCGCATTTCCAGAGGATTATTTAATTGGTAAACAAACATTGATATGGAGGTGGATAGGTGAAGGTTTTGTCTGTAAGGAAGAAGGAAGAGACTTATATGAGGTGTGAGAGGGTTACTTCAACGAGCTTGTAAAACGACGTATGATCATGCCAATAGAGGCAGAGAATGAAGACTACATACTAGGCTGTCGTGTTCATGACATGGTGCTCGGTCTGATCCGGTCATTGTCAAGCAGTGAAAACTTTGTCACCGTATTGGGTATAGAACAATACAACACATCTCACCAGGGCTATGGTCGAAGGATAGCCATCCTAAGCAGCAAGAATGGATTACCCCCAGTGGTGAACCTGGGAACGGCACAGTCACAAGTGACAATCCGGTCATTTAGTGCCAATGGTTTGTCATACATAGATGTTCTGCCAACACCGGCGAAATTTGAAGCTGTGCGTGTACTGGCACTGCAAAATTGTGAATCATTGCAGGACCTTCACGGCCTGGAGCATATTGGCAGTTTACTTCACCTACGATACCTTGCACTGACGTACACACCTCTTTCTGAGCTCCCAAATGGAATAGCGGGACGTCTGAGGTTCCTAGAGACGCTGGATCTGTGGGGGACTGGCATAGAGCAAGTGCCGTCGAGCGTGGGCAAGTTGACACAGTTGCTGTGCCTACAAGCCGATATTAAAACAAGGGTGCCGGATTGGATCGGGAACCTGACGTCCCTGCAAGAGTTGTGGATGTGGCCTGATGCTGCAGCTGCAGGGCAGTTTGTGAAGGAGCTGGGCAAGCTCGAGGATCTGAGGGTGCTCTGTACTCAGTTCGAGGGTGCCCCCGCAACGGACATTATCGAGTCTCTAGGAAGTCTGCCCAAGATACAGAAAATGCACGCCTTT]
[+] EMBL AK121910             [      ATCCCACCGAGCGTACCATACACTACTGATACGCACACCTAGAGCAAGTTGAGCGAGCCATGGCGCTGGTGGCTGAGGCGATGGGGAGCCTTGTCCCCAAACTGACCGAGCTGCTCAAAGAGGAGTACAAGCTGCAAACGGGCGTTAGGGAGAAAATCAATTTTCTCAAGAGTGAGCTCGAGGACATGCATGCTGCCCTTCGCAAGGTTGGCAGCATGCATCCCGACCTGCTTGATGAGCAGGTCAGGATTTGGGCAAGCAAAGTCCGGGAGCTGTCGTATGACATGGAGGACGTCATCGACGCCTTTCTGGTGCGTGTAGATGGCAGTGTGCCTGCCAACCCCGGTTGCCTCGAACGGCTTGTGCACATGATGTGCGGCTTGTTCACCAAGATCAAGGTTCGCCATCAGATATCTGGCGTCGTCCAAGACATCAACACCAAACTAGAGGAGGTGTCCAAGGCGCGTGAAAGATACATAGCCTCTGATCTTCAGGCTAACCTAGCTGCCACACAATTGTCCACCCATGATCCTCGCATCCTGTTATCGAATACAGATGCGGCAAAGCTTGTTGGTATTGATGGCACAAGGAATGACATCATAAAGATCCTTTCCCTGGAGGGTGACAACTTGCCCTTGGGGAAGATGATAAAAGTTTCCATTGTTGGATCCGGGGGAATGGGCAAAACCACTCTCTCCAGAGCAGTGTACGACAGTGTTAAGGGGAAATTCCAATGCTCGGCATTTGTGCCAGTTGGCCAGAATCAAGACTTGAAGAGGGTCTTCATGGACGTTCTAAATGATCTTGACAAGGAAAAGTTCGACAATATCCATAGCACAAAAAAGGATGTAAGGTTACTCATGAACGAGGTCTACGACTTCCTTGAAAACAAGAGGTACATCATTGTTATTGATGACATTTGGAAATTCGATGCTTGGGACATGATTGCAAAAGTCCTGGGAGACAGTAGTTGTGGAAGTAGAGTGATCATAACTACTCGTATTTCTGAAATTGCTGAGGAAGTCGGTCATGTTTATGAAATAAAACACCTTTCTGATGTTGACTCGAGAAGGTTATTGCATAGAAGAATATTAAGTGGTGAAGACCAATGCCCCGATGATGATTATGATTTGGAAGAGGTTTGTGATGAAATTTTGAGGAAATGTGAAGGGGTACCATTGGCCATTGTTACAACGTCTAGTTTGTTGGAGAGTAAACCAAGGGAGGACTGGTCTGAGTTGTATCGGTCAATTGCTCTTGGCGCAAAAGACAACCGGCATGTGGATAATACTATGAAGATATTGTCTCTTAGTTTCTATCATTTGCCTTATCATCTAAGAACATGCTTATTGTACTTGAGCGCATTTCCAGAGGATTATTTAATTGGTAAACAAACATTGATATGGAGGTGGATAGGTGAAGGTTTTGTCTGTAAGGAAGAAGGAAGAGACTTATATGAGGTGTGAGAGGGTTACTTCAACGAGCTTGTAAAACGACGTATGATCATGCCAATAGAGGCAGAGAATGAAGACTACATACTAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_462#0 CAGGCCATCCCACCGAGCGTACCATACACTACTGATACGCACACCTAGAGCAAGTTGAGC GAGCCATGGCGCTGGTGGCTGAGGCGATGGGGAGCCTTGTCCCCAAACTGACCGAGCTGC TCAAAGAGGAGTACAAGCTGCAAACGGGCGTTAGGGAGAAAATCAATTTTCTCAAGAGTG AGCTCGAGGACATGCATGCTGCCCTTCGCAAGGTTGGCAGCATGCATCCCGACCTGCTTG ATGAGCAGGTCAGGATTTGGGCAAGCAAAGTCCGGGAGCTGTCGTATGACATGGAGGACG TCATCGACGCCTTTCTGGTGCGTGTAGATGGCAGTGTGCCTGCCAACCCCGGTTGCCTCG AACGGCTTGTGCACATGATGTGCGGCTTGTTCACCAAGATCAAGGTTCGCCATCAGATAT CTGGCGTCGTCCAAGACATCAACACCAAACTAGAGGAGGTGTCCAAGGCGCGTGAAAGAT ACATAGCCTCTGATCTTCAGGCTAACCTAGCTGCCACACAATTGTCCACCCATGATCCTC GCATCCTGTTATCGAATACAGATGCGGCAAAGCTTGTTGGTATTGATGGCACAAGGAATG ACATCATAAAGATCCTTTCCCTGGAGGGTGACAACTTGCCCTTGGGGAAGATGATAAAAG TTTCCATTGTTGGATCCGGGGGAATGGGCAAAACCACTCTCTCCAGAGCAGTGTACGACA GTGTTAAGGGGAAATTCCAATGCTCGGCATTTGTGCCAGTTGGCCAGAATCAAGACTTGA AGAGGGTCTTCATGGACGTTCTAAATGATCTTGACAAGGAAAAGTTCGACAATATCCATA GCACAAAAAAGGATGTAAGGTTACTCATGAACGAGGTCTACGACTTCCTTGAAAACAAGA GGTACATCATTGTTATTGATGACATTTGGAAATTCGATGCTTGGGACATGATTGCAAAAG TCCTGGGAGACAGTAGTTGTGGAAGTAGAGTGATCATAACTACTCGTATTTCTGAAATTG CTGAGGAAGTCGGTCATGTTTATGAAATAAAACACCTTTCTGATGTTGACTCGAGAAGGT TATTGCATAGAAGAATATTAAGTGGTGAAGACCAATGCCCCGTTGATGATTATGATTTGG AAGAGGTTTGTGATGAAATTTTGAGGAAATGTGAAGGGGTACCATTGGCCATTGTTACAA CGTCTAGTTTGTTGGAGAGTAAACCAAGGGAGGACTGGTCTGAGTTGTATCGGTCAATTG CTCTTGGCGCAAAAGACAACCGGCATGTGGATAATACTATGAAGATATGGTCTCTTAGTT TCTATCATTTGCCTTATCATCTAAGAACATGCTTATTGTACTTGAGCGCATTTCCAGAGG ATTATTTAATTGGTAAACAAACATTGATATGGAGGTGGATAGGTGAAGGTTTTGTCTGTA AGGAAGAAGGAAGAGACTTATATGAGGTGTGAGAGGGTTACTTCAACGAGCTTGTAAAAC GACGTATGATCATGCCAATAGAGGCAGAGAATGAAGACTACATACTAGGCTGTCGTGTTC ATGACATGGTGCTCGGTCTGATCCGGTCATTGTCAAGCAGTGAAAACTTTGTCACCGTAT TGGGTATAGAACAATACAACACATCTCACCAGGGCTATGGTCGAAGGATAGCCATCCTAA GCAGCAAGAATGGATTACCCCCAGTGGTGAACCTGGGAACGGCACAGTCACAAGTGACAA TCCGGTCATTTAGTGCCAATGGTTTGTCATACATAGATGTTCTGCCAACACCGGCGAAAT TTGAAGCTGTGCGTGTACTGGCACTGCAAAATTGTGAATCATTGCAGGACCTTCACGGCC TGGAGCATATTGGCAGTTTACTTCACCTACGATACCTTGCACTGACGTACACACCTCTTT CTGAGCTCCCAAATGGAATAGCGGGACGTCTGAGGTTCCTAGAGACGCTGGATCTGTGGG GGACTGGCATAGAGCAAGTGCCGTCGAGCGTGGGCAAGTTGACACAGTTGCTGTGCCTAC AAGCCGATATTAAAACAAGGGTGCCGGATTGGATCGGGAACCTGACGTCCCTGCAAGAGT TGTGGATGTGGCCTGATGCTGCAGCTGCAGGGCAGTTTGTGAAGGAGCTGGGCAAGCTCG AGGATCTGAGGGTGCTCTGTACTCAGTTCGAGGGTGCCCCCGCAACGGACATTATCGAGT CTCTAGGAAGTCTGCCCAAGATACAGAAAATGCACGCCTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)