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Oryza sativa
cluster # 4643 cluster # 4643       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4643#0 length = 1486 sequences # 3  
consensusID : consensus_4643#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1486
fasta sequence 
                              [CAAATCCCCTTCGCATTCGATCCCCTCCCCTCGCCGCCGTCTCCTCCACCTCCGCCGCTCGCCGCCCGATCCCCTCCCATCCCCTCCGCCCCGCCGCCCCGCACCTAGATATGCCGTCGTCGTCGTCGGCGGCGGCGGCGGCGTGCGGGCCCCCGGAGTTCACGCCGGGGTGGAAGACGGTGTCGACGTGCGCCCCGGACGTCGTCGGCGAGGGCGTCCACGTGTTCGACATCTTCGGGTACAGCGACCACAAGGGGATGGGCGCCCACGAGCCCATCAGGTCGGGGGCCTTCTCCGTCGCCGGCCTCGACTGGGTCGCCTGCCTCTACGCCGACGGCTACGGCGTCGCCGGCATCGACGACGTCTCCGCCTACCTCAGGCTCCTCGGCGACGCGCCCACCCCGCGCGTGTGGGTCTCCTGCGAGGTCAAGCTCGTCGACCAGCGCACCGGGGTGGCCTCCACGCCGCAGCCCTTCCTCAGGTACGCCCTGGCGTTCGGCGACAAGTGCAAGGCCCTCCACTGTATGATGATCCCCAGGGGCCAGATCGAGGTGGAGCCCTACCTCGTGGATGATCGCCTCACCATGGAGTTCCATGTCGTCGTCAGGAGAGACCCCCGGGTGTCGAGGACCGCCCGGTTCCCGCGCATCTTGGTGCCGCCGCCCGACATCAAGCGGCAGTTTGCCAACCTGCTGCAGAGCAAGGAGGGCGCAGATGTCACCTTCGATGTCGCGGGGGAGCCGTTCTCCGTGCACAAGCTCGTGCTCGCGATGCGGTCGCCAGTGTTCAAGGCGGAGCTCTGCGGGCTGCTGAGGGAGCCGGGAACACAGCCTATTACCATCGTTGATATGCAGCCCGCCGTCTTCAGGGCCCTGCTGCAATTCATCTATACCGATCAGTTCCCCGTGACGCGCGGTTTCGAGAGACGCGACAATTGTGAAATGATCCGGCACCTGCTCGTTGCTGCGGACAGATACGCCGTGGATAGGCTAAAGCTGCTATGCCAAGGTATCCTTTGCAAGAATCTTAATGTTCACAATGTCGCGACTACGCTGGCACTGGCTGATCAGCATCAATGCGACAAGCTGAAGGATGCTTGCATCGAATTTATGTCATGTTCAAAGAAGATGAAGGGTGTAGTGGCGAGCAAAGGGTATGAGGATCTCCAAAGAATGGCACCTTCTGTCTTGGCGGATGCCGTGGCGCAGATGTCGAAGCTCAACAAAATGTCAAGGGGTAGTGTTCCACAAGATGAGTCTAAGAGCTGTTAGCTTAATTTATAAGGGATATGGGTATTCTTTCTTCTCTTCCTAAATCAGGTACCGTAGTCAGTTTACTCTTTACATTTTGGGAGCACCTTTGTGGTGCTTATCTGTTTATATGATAGATAGGTTTATTTTATCTCTTCGCAAGCTTTGTTTCCATTAACTGACATATAACCTGTTGTCCTTCCGCAAAATTTATTTTGTGCGCCCTTGATCAAAAT]

[+] EMBL AK071657             [CAAATCCCCTTCGCATTCGATCCCCTCCCCTCGCCGCCGTCTCCTCCACCTCCGCCGCTCGCCGCCCGATCCCCTCCCATCCCCTCCGCCCCGCCGCCCCGCACCTAGATATGCCGTCGTCGTCGTCGGCGGCGGCGGCGGCGTGCGGGCCCCCGGAGTTCACGCCGGGGTGGAAGACGGTGTCGACGTGCGCCCCGGACGTCGTCGGCGAGGGCGTCCACGTGTTCGACATCTTCGGGTACAGCGACCACAAGGGGATGGGCGCCCACGAGCCCATCAGGTCGGGGGCCTTCTCCGTCGCCGGCCTCGACTGGGTCGCCTGCCTCTACGCCGACGGCTACGGCGTCGCCGGCATCGACGACGTCTCCGCCTACCTCAGGCTCCTCGGCGACGCGCCCACCCCGCGCGTGTGGGTCTCCTGCGAGGTCAAGCTCGTCGACCAGCGCACCGGGGTGGCCTCCACGCCGCAGCCCTTCCTCAGGTACGCCCTGGCGTTCGGCGACAAGTGCAAGGCCCTCCACTGTATGATGATCCCCAGGGGCCAGATCGAGGTGGAGCCCTACCTCGTGGATGATCGCCTCACCATGGAGTTCCATGTCGTCGTCAGGAGAGACCCCCGGGTGTCGAGGACCGCCCGGTTCCCGCGCATCTTGGTGCCGCCGCCCGACATCAAGCGGCAGTTTGCCAACCTGCTGCAGAGCAAGGAGGGCGCAGATGTCACCTTCGATGTCGCGGGGGAGCCGTTCTCCGTGCACAAGCTCGTGCTCGCGATGCGGTCGCCAGTGTTCAAGGCGGAGCTCTGCGGGCTGCTGAGGGAGCCGGGAACACAGCCTATTACCATCGTTGATATGCAGCCCGCCGTCTTCAGGGCCCTGCTGCAATTCATCTATACCGATCAGTTCCCCGTGACGCGCGGTTTCGAGAGACGCGACAATTGTGAAATGATCCGGCACCTGCTCGTTGCTGCGGACAGATACGCCGTGGATAGGCTAAAGCTGCTATGCCAAGGTATCCTTTGCAAGAATCTTAATGTTCACAATGTCGCGACTACGCTGGCACTGGCTGATCAGCATCAATGCGACAAGCTGAAGGATGCTTGCATCGAATTTATGTCATGTTCAAAGAAGATGAAGGGTGTAGTGGCGAGCAAAGGGTATGAGGATCTCCAAAGAATGGCACCTTCTGTCTTGGCGGATGCCGTGGCGCAGATGTCGAAGCTCAACAAAATGTCAAGGGGTAGTGTTCCACAAGATGAGTCTAAGAGCTGTTAGCTTAATTTATAAGGGATATGGGTATTCTTTCTTCTCTTCCTAAATCAGGTACCGTAGTCAGTTTACTCTTTACATTTTGGGAGCACCTTTGTGGTGCTTATCTGTTTATATGATAGATAGGTTTATTTTATCTCTTCGCAAGCTTTGTTTCCATTAACTGACATATAACCTGTTGTCCTTCCGCAAAATTTATTTTGTGCGCCCTTGATCAAAAT]
[+] EMBL AK103481             [CAAATCCCCTTCGCATTCGATCCCCTCCCCTCGCCGCCGTCTCCTCCACCTCCGCCGCTCGCCGCCCGATCCCCTCCCATCCCCTCCGCCCCGCCGCCCCGCACCTAGATATGCCGTCGTCGTCGTCGGCGGCGGCGGCGGCGTGCGGGCCCCCGGAGTTCACGCCGGGGTGGAAGACGGTGTCGACGTGCGCCCCGGACGTCGTCGGCGAGGGCGTCCACGTGTTCGACATCTTCGGGTACAGCGACCACAAGGGGATGGGCGCCCACGAGCCCATCAGGTCGGGGGCCTTCTCCGTCGCCGGCCTCGACTGGGTCGCCTGCCTCTACGCCGACGGCTACGGCGTCGCCGGCATCGACGACGTCTCCGCCTACCTCAGGCTCCTCGGCGACGCGCCCACCCCGCGCGTGTGGGTCTCCTGCGAGGTCAAGCTCGTCGACCAGCGCACCGGGGTGGCCTCCACGCCGCAGCCCTTCCTCAGGTACGCCCTGGCGTTCGGCGACAAGTGCAAGGCCCTCCACTGTATGATGATCCCCAGGGGCCAGATCGAGGTGGAGCCCTACCTCGTGGATGATCGCCTCACCATGGAGTTCCATGTCGTCGTCAGGAGAGACCCCCGGGTGTCGAGGACCGCCCGGTTCCCGCGCATCTTGGTGCCGCCGCCCGACATCAAGCGGCAGTTTGCCAACCTGCTGCAGAGCAAGGAGGGCGCAGATGTCACCTTCGATGTCGCGGGGGAGCCGTTCTCCGTGCACAAGCTCGTGCTCGCGATGCGGTCGCCAGTGTTCAAGGCGGAGCTCTGCGGGCTGCTGAGGGAGCCGGGAACACAGCCTATTACCATCGTTGATATGCAGCCCGCCGTCTTCAGGGCCCTGCTGCAATTCATCTATACCGATCAGTTCCCCGTGACGCGCGGTTTCGAGAGACGCGACAATTGTGAAATGATCCGGCACCTGCTCGTTGCTGCGGACAGATACGCCGTGGATAGGCTAAAGCTGCTATGCCAAGGTATCCTTTGCAAGAATCTTAATGTTCACAATGTCGCGACTACGCTGGCACTGGCTGATCAGCATCAATGCGACAAGCTGAAGGATGCTTGCATCGAATTTATGTCATGTTCAAAGAAGATGAAGGGTGTAGTGGCGAGCAAAGGGTATGAGGATCTCCAAAGAATGGCACCTTCTGTCTTGGCGGATGCCGTGGCGCAGATGTCGAAGCTCAACAAAATGTCAAGGGGTAGTGTTCCACAAGATGAGTCTAAGAGCTGTTAGCTTAATTTATAAGGGATATGGGTATTCTTTCTTCTCTTCCTAAATCAGGTACCGTAGTCAGTTTACTCTTTACATTTTGGGAGCACCTTTGTGGTGCTTATCTGTTTATATGATAGATAGGTTTATTTTATCTCTTTGCAAGCTTTGTTTCCATTAACTGACATATAACCTGTT                                         ]
[+] EMBL AU069321             [                          CCCCTCGCCGCCGTCTCCTCCACCTCCGCCGCTCGCCGCCCGATCCCCTCCCATCCCCTCNGCCCCGCCGCCCCGCACCTAGATATGNNGTCGTCGTCGTCGGCGGCGGCGGCGGCGTGCGGGCNCCCGGAGTTCACGNNGGGGTGGAAGACGGTGTCGACGTGCGCCCCGGACGTNGTCGGCGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_4643#0
CAAATCCCCTTCGCATTCGATCCCCTCCCCTCGCCGCCGTCTCCTCCACCTCCGCCGCTC
GCCGCCCGATCCCCTCCCATCCCCTCCGCCCCGCCGCCCCGCACCTAGATATGCCGTCGT
CGTCGTCGGCGGCGGCGGCGGCGTGCGGGCCCCCGGAGTTCACGCCGGGGTGGAAGACGG
TGTCGACGTGCGCCCCGGACGTCGTCGGCGAGGGCGTCCACGTGTTCGACATCTTCGGGT
ACAGCGACCACAAGGGGATGGGCGCCCACGAGCCCATCAGGTCGGGGGCCTTCTCCGTCG
CCGGCCTCGACTGGGTCGCCTGCCTCTACGCCGACGGCTACGGCGTCGCCGGCATCGACG
ACGTCTCCGCCTACCTCAGGCTCCTCGGCGACGCGCCCACCCCGCGCGTGTGGGTCTCCT
GCGAGGTCAAGCTCGTCGACCAGCGCACCGGGGTGGCCTCCACGCCGCAGCCCTTCCTCA
GGTACGCCCTGGCGTTCGGCGACAAGTGCAAGGCCCTCCACTGTATGATGATCCCCAGGG
GCCAGATCGAGGTGGAGCCCTACCTCGTGGATGATCGCCTCACCATGGAGTTCCATGTCG
TCGTCAGGAGAGACCCCCGGGTGTCGAGGACCGCCCGGTTCCCGCGCATCTTGGTGCCGC
CGCCCGACATCAAGCGGCAGTTTGCCAACCTGCTGCAGAGCAAGGAGGGCGCAGATGTCA
CCTTCGATGTCGCGGGGGAGCCGTTCTCCGTGCACAAGCTCGTGCTCGCGATGCGGTCGC
CAGTGTTCAAGGCGGAGCTCTGCGGGCTGCTGAGGGAGCCGGGAACACAGCCTATTACCA
TCGTTGATATGCAGCCCGCCGTCTTCAGGGCCCTGCTGCAATTCATCTATACCGATCAGT
TCCCCGTGACGCGCGGTTTCGAGAGACGCGACAATTGTGAAATGATCCGGCACCTGCTCG
TTGCTGCGGACAGATACGCCGTGGATAGGCTAAAGCTGCTATGCCAAGGTATCCTTTGCA
AGAATCTTAATGTTCACAATGTCGCGACTACGCTGGCACTGGCTGATCAGCATCAATGCG
ACAAGCTGAAGGATGCTTGCATCGAATTTATGTCATGTTCAAAGAAGATGAAGGGTGTAG
TGGCGAGCAAAGGGTATGAGGATCTCCAAAGAATGGCACCTTCTGTCTTGGCGGATGCCG
TGGCGCAGATGTCGAAGCTCAACAAAATGTCAAGGGGTAGTGTTCCACAAGATGAGTCTA
AGAGCTGTTAGCTTAATTTATAAGGGATATGGGTATTCTTTCTTCTCTTCCTAAATCAGG
TACCGTAGTCAGTTTACTCTTTACATTTTGGGAGCACCTTTGTGGTGCTTATCTGTTTAT
ATGATAGATAGGTTTATTTTATCTCTTCGCAAGCTTTGTTTCCATTAACTGACATATAAC
CTGTTGTCCTTCCGCAAAATTTATTTTGTGCGCCCTTGATCAAAAT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)