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Oryza sativa
cluster # 4647 cluster # 4647       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4647#0 length = 2867 sequences # 2  
 consensus_4647#1 length = 598 sequences # 1  
consensusID : consensus_4647#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2867
fasta sequence 
                              [CCAAACCAAAACCAACCAAACCTCGCGGGCGGCCGCCTAGGGCTTATGGCTGCCGCGATGGCCACCGGCGGGCTCGACCCCGCCGCCCGCGAGGCCGAGCTCGCCCACCTCCCGGGCCCCAAGCTCGTCGACCACCTCTGCACCACCCACCGCCGGGCCGACTACGAGGCAGTCGCGCGGGTGCTCGACGCCCGGGACCGCAGGCTCGAGGCCGCGCTCGCCGAGAACGAGGACCTGCGGAGGAAGTGCGACGCGCTGCTGGTCGGTCAGCGCCGGCCGCGGGAGGAGGAGGAGGAGGAGGCGGCCGGGGAGAAGCCGCCCCCCGGAATCATCGCCGCCCCGGAACCGGCACGGCGGGACGAGGAGGAAGTCGAGGGGTCGTCAGAGGAAGGGGAGGTTAGAGGCGTCGACTTTATTGACCTCTCCTCCTCCTCCTCCGACGACGAGGAGGAGAAGGAGGTGGAGGCGGGCCGCGGCGCTGGTTCGAGGGTTCCGATCATCAAGGAGGCGCCCGATGACGCGGAGGGGGACGAGGACGACACCTTGCCGCTGAGCCAGCTCTGGAAGAGGCGTCGGCTAGGTGAGCCCGGGGCTGTGAAATCGGAGAAAGGAGATGGGCACAATCCGGTCGATTCTGGGGGGAATGATCCACCGAAATGTACTTCTGCGAGGACGGATGTTCCGGAAGCATCAACCGGGGAGATGGTGAGTAGGCCTGGGGATTCGATGGTAGCAGCTTTCGTGCAGGGTAAGGGAACAGTGCAACCGGAGAATGTGGGTGGGGAAATGCCCAGGGTAATGCTGCATTCCCCGGCACAAGTTATCCGGAGCACCTTGCAGAAAAGAAAATTTGGCAAGAAAGATGGTTCATCTGCTATTTCAGGGGACACTACTTCTTCCCAAGCAAGAAGTACAAGCCTTGCACCCAAGAGAGAAGGTTCAGCTGCTGTTCCAGGGTACACTACGTCTTCCCAAGCAAGAAATACAGGCCTTTCACCCAAGAAATGCAGGGATTCAACGAGCCCAGATGATGAAATGTGCAATGCACTTGCTGATTCTGTACAGGTTGGAGCTGGTAGCACGATGCCGAGGGGTCCCGGTGAGCAAGACAAAGGAATTGGTGCAGTGCAAAGGGCAACGGTGCTGCATGGGACTAGTGGAATTGGGGAGCAAGGCGGTAAGCTTGATTCTACTCCGACTAAAGTTAGGGAATCGAACAGGAGAGAGGGAGGACTGCAGAACAAATCAATCGATTCGAAGTCAAATGATGCGCTGAAACACCAGGATAAAAAAGATGGTAGAATGGTACAGAAAGGGGATCTCTCAGTGCAGTCATGTGTGCCTGCTAGGCCAATAGTTGCTAGTGTTCCTTCGGTAACTAAAAATTCTGAAAAGGGAAACAGTGAAAAGGGAGTTAGTCAACCACCAAAGGGAAATGACCAAATGAACAAGATGTCAATGGTGGAATCATCATCCAAATGTGGGTATGAGAAAGTCGGGGCTGATGTGCAGAAGTGCTCACCTCTACCAAGACAAAGTGAAGAAGGAAGTGTAGCAAGGGGAGTAGTTTCATTTGAAGAGACTGGAATAGCAACAGTTCATCCTCTGAGCATTCGCAATCTGTCAGGACCAGAACTTCGAAACTTAAACAAAGGAGGTGGTGAATTGTCAAAGAAATTGGTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCTCGTTCAGAGAAAAACTCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAAGGGGCTTCAAATGAAGAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTACTCAACAGGTGAACAAATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCCAAAAAAGCTTTGTTTGAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTGTCCACCTTCCAGTGGTAAAAGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCAGCTATGTCAAGGCACTGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATGGAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTTCTTTTGGACGGTAAGCTTAAAGGGCCTCTGAAAAGAACTGCCAAGGAACTACTAAGCCATGATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTCTCCAAAGAACTGTTCGATATTTACAAGAACAAGAAGGATCCGTACTTCTGTTGACAGCAAGGAAGCGATACGTGGTTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATGAACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTCTAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGGGCAACTATTCTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTCTATACATTTAAATACGAAATATTGAAGAGACATCGGAAGCACTACAAGAGTTTGAAGCTCCAGTGCCTTCCACTGTTTTAAGATGTTGATGCTGCAAAGTATAGCACCTCTTGTGTTGCATAGTTTTGTGACTGCACAGAGCCTCCATCCAGTAGATCCCATTTTGTGAGTTCGAGTTCTTGAGACATCATGTAATGCAGGGGTCAATTGATGGATGCAGATATCTCTTGCAAAGTTTT]

[+] EMBL AK103616             [CCAAACCAAAACCAACCAAACCTCGCGGGCGGCCGCCTAGGGCTTATGGCTGCCGCGATGGCCACCGGCGGGCTCGACCCCGCCGCCCGCGAGGCCGAGCTCGCCCACCTCCCGGGCCCCAAGCTCGTCGACCACCTCTGCACCACCCACCGCCGGGCCGACTACGAGGCAGTCGCGCGGGTGCTCGACGCCCGGGACCGCAGGCTCGAGGCCGCGCTCGCCGAGAACGAGGACCTGCGGAGGAAGTGCGACGCGCTGCTGGTCGGTCAGCGCCGGCCGCGGGAGGAGGAGGAGGAGGAGGCGGCCGGGGAGAAGCCGCCCCCCGGAATCATCGCCGCCCCGGAACCGGCACGGCGGGACGAGGAGGAAGTCGAGGGGTCGTCAGAGGAAGGGGAGGTTAGAGGCGTCGACTTTATTGACCTCTCCTCCTCCTCCTCCGACGACGAGGAGGAGAAGGAGGTGGAGGCGGGCCGCGGCGCTGGTTCGAGGGTTCCGATCATCAAGGAGGCGCCCGATGACGCGGAGGGGGACGAGGACGACACCTTGCCGCTGAGCCAGCTCTGGAAGAGGCGTCGGCTAGGTGAGCCCGGGGCTGTGAAATCGGAGAAAGGAGATGGGCACAATCCGGTCGATTCTGGGGGGAATGATCCACCGAAATGTACTTCTGCGAGGACGGATGTTCCGGAAGCATCAACCGGGGAGATGGTGAGTAGGCCTGGGGATTCGATGGTAGCAGCTTTCGTGCAGGGTAAGGGAACAGTGCAACCGGAGAATGTGGGTGGGGAAATGCCCAGGGTAATGCTGCATTCCCCGGCACAAGTTATCCGGAGCACCTTGCAGAAAAGAAAATTTGGCAAGAAAGATGGTTCATCTGCTATTTCAGGGGACACTACTTCTTCCCAAGCAAGAAGTACAAGCCTTGCACCCAAGAGAGAAGGTTCAGCTGCTGTTCCAGGGTACACTACGTCTTCCCAAGCAAGAAATACAGGCCTTTCACCCAAGAAATGCAGGGATTCAACGAGCCCAGATGATGAAATGTGCAATGCACTTGCTGATTCTGTACAGGTTGGAGCTGGTAGCACGATGCCGAGGGGTCCCGGTGAGCAAGACAAAGGAATTGGTGCAGTGCAAAGGGCAACGGTGCTGCATGGGACTAGTGGAATTGGGGAGCAAGGCGGTAAGCTTGATTCTACTCCGACTAAAGTTAGGGAATCGAACAGGAGAGAGGGAGGACTGCAGAACAAATCAATCGATTCGAAGTCAAATGATGCGCTGAAACACCAGGATAAAAAAGATGGTAGAATGGTACAGAAAGGGGATCTCTCAGTGCAGTCATGTGTGCCTGCTAGGCCAATAGTTGCTAGTGTTCCTTCGGTAACTAAAAATTCTGAAAAGGGAAACAGTGAAAAGGGAGTTAGTCAACCACCAAAGGGAAATGACCAAATGAACAAGATGTCAATGGTGGAATCATCATCCAAATGTGGGTATGAGAAAGTCGGGGCTGATGTGCAGAAGTGCTCACCTCTACCAAGACAAAGTGAAGAAGGAAGTGTAGCAAGGGGAGTAGTTTCATTTGAAGAGACTGGAATAGCAACAGTTCATCCTCTGAGCATTCGCAATCTGTCAGGACCAGAACTTCGAAACTTAAACAAAGGAGGTGGTGAATTGTCAAAGAAATTGGTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCTCGTTCAGAGAAAAACTCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAAGGGGCTTCAAATGAAGAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTACTCAACAGGTGAACAAATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCCAAAAAAGCTTTGTTTGAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTGTCCACCTTCCAGTGGTAAAAGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCAGCTATGTCAAGGCACTGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATGGAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTTCTTTTGGACGGTAAGCTTAAAGGGCCTCTGAAAAGAACTGCCAAGGAACTACTAAGCCATGATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTCTCCAAAGAACTGTTCGATATTTACAAGAACAAGAAGGATCCGTACTTCTGTTGACAGCAAGGAAGCGATACGTGGTTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATGAACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTCTAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGGGCAACTATTCTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTCTATACATTTAAATACGAAATATTGAAGAGACATCGGAAGCACTACAAGAGTTTGAAGCTCCAGTGCCTTCCACTGTTTTAAGATGTTGATGCTGCAAAGTATAGCACCTCTTGTGTTGCATAGTTTTGTGACTGCACAGAGCCTCCATCCAGTAGATCCCATTTTGTGAGTTCGAGTTCTTGAGACATCATGTAATGCAGGGGTCAATTGATGGATGCAGATATCTCTTGCAAAGTTTT]
[+] EMBL CF327481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGAAATTGGTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCTCGTTCAGAGAAAAACTCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAAGGGGCTTCAAATGAAGAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTACTCAACAGGTGAACAAATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCCAAAAAAGCTTTGTTTGAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTATCCACCTTCCAGTGGTAAAAGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCAGCTATGTCAAGGCACTGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATGGAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_4647#0
CCAAACCAAAACCAACCAAACCTCGCGGGCGGCCGCCTAGGGCTTATGGCTGCCGCGATG
GCCACCGGCGGGCTCGACCCCGCCGCCCGCGAGGCCGAGCTCGCCCACCTCCCGGGCCCC
AAGCTCGTCGACCACCTCTGCACCACCCACCGCCGGGCCGACTACGAGGCAGTCGCGCGG
GTGCTCGACGCCCGGGACCGCAGGCTCGAGGCCGCGCTCGCCGAGAACGAGGACCTGCGG
AGGAAGTGCGACGCGCTGCTGGTCGGTCAGCGCCGGCCGCGGGAGGAGGAGGAGGAGGAG
GCGGCCGGGGAGAAGCCGCCCCCCGGAATCATCGCCGCCCCGGAACCGGCACGGCGGGAC
GAGGAGGAAGTCGAGGGGTCGTCAGAGGAAGGGGAGGTTAGAGGCGTCGACTTTATTGAC
CTCTCCTCCTCCTCCTCCGACGACGAGGAGGAGAAGGAGGTGGAGGCGGGCCGCGGCGCT
GGTTCGAGGGTTCCGATCATCAAGGAGGCGCCCGATGACGCGGAGGGGGACGAGGACGAC
ACCTTGCCGCTGAGCCAGCTCTGGAAGAGGCGTCGGCTAGGTGAGCCCGGGGCTGTGAAA
TCGGAGAAAGGAGATGGGCACAATCCGGTCGATTCTGGGGGGAATGATCCACCGAAATGT
ACTTCTGCGAGGACGGATGTTCCGGAAGCATCAACCGGGGAGATGGTGAGTAGGCCTGGG
GATTCGATGGTAGCAGCTTTCGTGCAGGGTAAGGGAACAGTGCAACCGGAGAATGTGGGT
GGGGAAATGCCCAGGGTAATGCTGCATTCCCCGGCACAAGTTATCCGGAGCACCTTGCAG
AAAAGAAAATTTGGCAAGAAAGATGGTTCATCTGCTATTTCAGGGGACACTACTTCTTCC
CAAGCAAGAAGTACAAGCCTTGCACCCAAGAGAGAAGGTTCAGCTGCTGTTCCAGGGTAC
ACTACGTCTTCCCAAGCAAGAAATACAGGCCTTTCACCCAAGAAATGCAGGGATTCAACG
AGCCCAGATGATGAAATGTGCAATGCACTTGCTGATTCTGTACAGGTTGGAGCTGGTAGC
ACGATGCCGAGGGGTCCCGGTGAGCAAGACAAAGGAATTGGTGCAGTGCAAAGGGCAACG
GTGCTGCATGGGACTAGTGGAATTGGGGAGCAAGGCGGTAAGCTTGATTCTACTCCGACT
AAAGTTAGGGAATCGAACAGGAGAGAGGGAGGACTGCAGAACAAATCAATCGATTCGAAG
TCAAATGATGCGCTGAAACACCAGGATAAAAAAGATGGTAGAATGGTACAGAAAGGGGAT
CTCTCAGTGCAGTCATGTGTGCCTGCTAGGCCAATAGTTGCTAGTGTTCCTTCGGTAACT
AAAAATTCTGAAAAGGGAAACAGTGAAAAGGGAGTTAGTCAACCACCAAAGGGAAATGAC
CAAATGAACAAGATGTCAATGGTGGAATCATCATCCAAATGTGGGTATGAGAAAGTCGGG
GCTGATGTGCAGAAGTGCTCACCTCTACCAAGACAAAGTGAAGAAGGAAGTGTAGCAAGG
GGAGTAGTTTCATTTGAAGAGACTGGAATAGCAACAGTTCATCCTCTGAGCATTCGCAAT
CTGTCAGGACCAGAACTTCGAAACTTAAACAAAGGAGGTGGTGAATTGTCAAAGAAATTG
GTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCTCGTTCAGAGAAAAAC
TCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAAGGGGCTTCAAATGAA
GAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTACTCAACAGGTGAACAA
ATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCCAAAAAAGCTTTGTTT
GAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTGTCCACCTTCCAGTGGTAAA
AGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCAGCTATGTCAAGGCAC
TGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATGGAGCTCTCTATGCAA
GCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAA
ACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTT
CTTTTGGACGGTAAGCTTAAAGGGCCTCTGAAAAGAACTGCCAAGGAACTACTAAGCCAT
GATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTCTCCAAAGAACTGTTC
GATATTTACAAGAACAAGAAGGATCCGTACTTCTGTTGACAGCAAGGAAGCGATACGTGG
TTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATG
AACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTC
TAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGG
GCAACTATTCTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTCTATACATTTAAA
TACGAAATATTGAAGAGACATCGGAAGCACTACAAGAGTTTGAAGCTCCAGTGCCTTCCA
CTGTTTTAAGATGTTGATGCTGCAAAGTATAGCACCTCTTGTGTTGCATAGTTTTGTGAC
TGCACAGAGCCTCCATCCAGTAGATCCCATTTTGTGAGTTCGAGTTCTTGAGACATCATG
TAATGCAGGGGTCAATTGATGGATGCAGATATCTCTTGCAAAGTTTT

consensusID : consensus_4647#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence 
                              [CCTCACTTAGGGGAAACATGGAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTTCTTTTGGACGGTAAGCTTAAAGGGCCTTTGAAAAGAACTGCCAAGGAACTACTAAGCCATGATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTTTCCAAAGAACTGTTCGATATTTACAAGAACAAGAAGGATCCGTACTTTTGTTGACGGCAAGGAAGCGATACGTGGTTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATGAACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTTTAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGGGCAACTATTTTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTTTATACATTTAAATACGAAATAAAAAAAAAAAAAAA]

[-] EMBL CF327480             [CCTCACTTAGGGGAAACATGGAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTTCTTTTGGACGGTAAGCTTAAAGGGCCTTTGAAAAGAACTGCCAAGGAACTACTAAGCCATGATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTTTCCAAAGAACTGTTCGATATTTACAAGAACAAGAAGGATCCGTACTTTTGTTGACGGCAAGGAAGCGATACGTGGTTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATGAACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTTTAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGGGCAACTATTTTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTTTATACATTTAAATACGAAATAAAAAAAAAAAAAAA]




>consensus_4647#1
CCTCACTTAGGGGAAACATGGAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAA
GGAAGTTAGTAATCATGTCAACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAA
TTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTTCTTTTGGACGGTAAGCTTAAAGGGC
CTTTGAAAAGAACTGCCAAGGAACTACTAAGCCATGATGCTACAGGGCCCACTTTCCTGG
AGAAAGTAGCACTAAGTTTTTCCAAAGAACTGTTCGATATTTACAAGAACAAGAAGGATC
CGTACTTTTGTTGACGGCAAGGAAGCGATACGTGGTTTAACATTCAGATATCCATAACTT
GTCATATAGTAGGGTCACTATAGTTTGTTGTCATGAACAGCTGCTGCTGAAATTAGCAGT
TTACTCACCTTCCCTGACTACAACAATTAGCAGTTTAGGTCCTCCGTCCGTGAACCATGG
TTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGGGCAACTATTTTATGCATTTAAACCC
GCCAGCCCGGCGAAAAAAAATTTTATACATTTAAATACGAAATAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4647#0      CCAAACCAAAACCAACCAAACCTCGCGGGCGGCCGCCTAGGGCTTATGGCTGCCGCGATG 60
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GCCACCGGCGGGCTCGACCCCGCCGCCCGCGAGGCCGAGCTCGCCCACCTCCCGGGCCCC 120
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AAGCTCGTCGACCACCTCTGCACCACCCACCGCCGGGCCGACTACGAGGCAGTCGCGCGG 180
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GTGCTCGACGCCCGGGACCGCAGGCTCGAGGCCGCGCTCGCCGAGAACGAGGACCTGCGG 240
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AGGAAGTGCGACGCGCTGCTGGTCGGTCAGCGCCGGCCGCGGGAGGAGGAGGAGGAGGAG 300
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GCGGCCGGGGAGAAGCCGCCCCCCGGAATCATCGCCGCCCCGGAACCGGCACGGCGGGAC 360
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GAGGAGGAAGTCGAGGGGTCGTCAGAGGAAGGGGAGGTTAGAGGCGTCGACTTTATTGAC 420
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      CTCTCCTCCTCCTCCTCCGACGACGAGGAGGAGAAGGAGGTGGAGGCGGGCCGCGGCGCT 480
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GGTTCGAGGGTTCCGATCATCAAGGAGGCGCCCGATGACGCGGAGGGGGACGAGGACGAC 540
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      ACCTTGCCGCTGAGCCAGCTCTGGAAGAGGCGTCGGCTAGGTGAGCCCGGGGCTGTGAAA 600
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      TCGGAGAAAGGAGATGGGCACAATCCGGTCGATTCTGGGGGGAATGATCCACCGAAATGT 660
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      ACTTCTGCGAGGACGGATGTTCCGGAAGCATCAACCGGGGAGATGGTGAGTAGGCCTGGG 720
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GATTCGATGGTAGCAGCTTTCGTGCAGGGTAAGGGAACAGTGCAACCGGAGAATGTGGGT 780
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GGGGAAATGCCCAGGGTAATGCTGCATTCCCCGGCACAAGTTATCCGGAGCACCTTGCAG 840
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AAAAGAAAATTTGGCAAGAAAGATGGTTCATCTGCTATTTCAGGGGACACTACTTCTTCC 900
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      CAAGCAAGAAGTACAAGCCTTGCACCCAAGAGAGAAGGTTCAGCTGCTGTTCCAGGGTAC 960
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      ACTACGTCTTCCCAAGCAAGAAATACAGGCCTTTCACCCAAGAAATGCAGGGATTCAACG 1020
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AGCCCAGATGATGAAATGTGCAATGCACTTGCTGATTCTGTACAGGTTGGAGCTGGTAGC 1080
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      ACGATGCCGAGGGGTCCCGGTGAGCAAGACAAAGGAATTGGTGCAGTGCAAAGGGCAACG 1140
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GTGCTGCATGGGACTAGTGGAATTGGGGAGCAAGGCGGTAAGCTTGATTCTACTCCGACT 1200
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AAAGTTAGGGAATCGAACAGGAGAGAGGGAGGACTGCAGAACAAATCAATCGATTCGAAG 1260
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      TCAAATGATGCGCTGAAACACCAGGATAAAAAAGATGGTAGAATGGTACAGAAAGGGGAT 1320
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      CTCTCAGTGCAGTCATGTGTGCCTGCTAGGCCAATAGTTGCTAGTGTTCCTTCGGTAACT 1380
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AAAAATTCTGAAAAGGGAAACAGTGAAAAGGGAGTTAGTCAACCACCAAAGGGAAATGAC 1440
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      CAAATGAACAAGATGTCAATGGTGGAATCATCATCCAAATGTGGGTATGAGAAAGTCGGG 1500
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GCTGATGTGCAGAAGTGCTCACCTCTACCAAGACAAAGTGAAGAAGGAAGTGTAGCAAGG 1560
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GGAGTAGTTTCATTTGAAGAGACTGGAATAGCAACAGTTCATCCTCTGAGCATTCGCAAT 1620
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      CTGTCAGGACCAGAACTTCGAAACTTAAACAAAGGAGGTGGTGAATTGTCAAAGAAATTG 1680
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCTCGTTCAGAGAAAAAC 1740
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      TCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAAGGGGCTTCAAATGAA 1800
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTACTCAACAGGTGAACAA 1860
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      ATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCCAAAAAAGCTTTGTTT 1920
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      GAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTGTCCACCTTCCAGTGGTAAA 1980
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      AGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCAGCTATGTCAAGGCAC 2040
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      TGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATGGAGCTCTCTATGCAA 2100
consensus_4647#1      -------------------------CCTCACTTAGGGGAAACATGGAGCTCTCTATGCAA 35
                                               ***********************************

consensus_4647#0      GCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAA 2160
consensus_4647#1      GCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAGGACAACAA 95
                      ************************************************************

consensus_4647#0      ACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTT 2220
consensus_4647#1      ACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGTTAGAATTT 155
                      ************************************************************

consensus_4647#0      CTTTTGGACGGTAAGCTTAAAGGGCCTCTGAAAAGAACTGCCAAGGAACTACTAAGCCAT 2280
consensus_4647#1      CTTTTGGACGGTAAGCTTAAAGGGCCTTTGAAAAGAACTGCCAAGGAACTACTAAGCCAT 215
                      *************************** ********************************

consensus_4647#0      GATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTCTCCAAAGAACTGTTC 2340
consensus_4647#1      GATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTTTCCAAAGAACTGTTC 275
                      ******************************************** ***************

consensus_4647#0      GATATTTACAAGAACAAGAAGGATCCGTACTTCTGTTGACAGCAAGGAAGCGATACGTGG 2400
consensus_4647#1      GATATTTACAAGAACAAGAAGGATCCGTACTTTTGTTGACGGCAAGGAAGCGATACGTGG 335
                      ******************************** ******* *******************

consensus_4647#0      TTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATG 2460
consensus_4647#1      TTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTGTTGTCATG 395
                      ************************************************************

consensus_4647#0      AACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTC 2520
consensus_4647#1      AACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAATTAGCAGTT 455
                      *********************************************************** 

consensus_4647#0      TAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGG 2580
consensus_4647#1      TAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGTCGTGGTGG 515
                      ************************************************************

consensus_4647#0      GCAACTATTCTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTCTATACATTTAAA 2640
consensus_4647#1      GCAACTATTTTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTTTATACATTTAAA 575
                      ********* ************************************* ************

consensus_4647#0      TACGAAATATTGAAGAGACATCGGAAGCACTACAAGAGTTTGAAGCTCCAGTGCCTTCCA 2700
consensus_4647#1      TACGAAATAAAAAAAAAAAAAAA------------------------------------- 598
                      *********   ** * * *                                        

consensus_4647#0      CTGTTTTAAGATGTTGATGCTGCAAAGTATAGCACCTCTTGTGTTGCATAGTTTTGTGAC 2760
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      TGCACAGAGCCTCCATCCAGTAGATCCCATTTTGTGAGTTCGAGTTCTTGAGACATCATG 2820
consensus_4647#1      ------------------------------------------------------------
                                                                                  

consensus_4647#0      TAATGCAGGGGTCAATTGATGGATGCAGATATCTCTTGCAAAGTTTT 2867
consensus_4647#1      -----------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)