These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4683#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 909 fasta sequence [CGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGNCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGNCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGC-GGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCAC-GCGGGACAAGCGCGGCGC-GCC-GTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCA-CCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGC-CCGCCTGGTGCCCGCCGA-GGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCAC-GCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGC] [+] EMBL AU057095 [CGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGNCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGNCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGC GGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCAC GCGGGACAAGCGCGGCGC GCC GTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCA CCCTGGTGTGGCTCTGCTCGGCGCAG ACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACA ] [+] EMBL BI806656 [ CGATCTC CGNTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGCAGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCACAGCNGGACAAGCGCGGCGCAGCCAGTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCACCCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGC CCGCCTGGTGCCCGCCGA GGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCACAGCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGG ] [+] EMBL AU162736 [ CCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCA CCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGCGCCGCCTGGTGCCCGCCGAGGGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCAC GCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||