cluster # 4687

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Oryza sativa
cluster # 4687 cluster # 4687 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4687#0 length = 1432 sequences # 3
consensusID : consensus_4687#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1432
fasta sequence
                              [GAACCAAGAAAAGTCTCTCTCTCCTCTCCTCTCTTCTTCATCAACACACACTGGTTGACCAACCAGCTAGCTGATCGAGTTCGTTGTTTACCATCCTATTAATACCCCTTCCTCTCTCTCTTCTCCCCTCCTGAATTTCTCTCTTGGTAGAGGTAGAATTGATCTCCTTTCTTGTTCTTCTTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGATCCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATGAGCGGGATGAATTCGCTGAGCATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGGTTCCACCCGCGAGACGACGAGCTCGTGCTGGACTACCTGGAAAGGAAGCTCCTCGACGGCGGCGTGGGCGGCGCCGCGGCGGCGGCGGCGGCGGTCACCATCTACGGCTGCCCGGTGATGGTCGACGTCGATCTCAACAAGTGCGAGCCATGGGACCTTCCTGAGATCGCTTGCGTTGGTGGCAAGGAGTGGTACTTCTATAGCCTTAGGGATAGGAAGTATGCAACTGGCCAACGAACAAATAGAGCAACCGAATCGGGCTACTGGAAGGCCACAGGAAAAGATCGCCCAATAAGCCGGAAAGGATTGCTCGTCGGTATGCGAAAAACCCTGGTGTTCTACAAAGGTAGAGCCCCTAAGGGGAAGAAGACCGAGTGGGTCATGCATGAATTCCGCAAAGAAGGACAAGGGGATCCGATGAAGTTGCCTCTCAAGGAGGACTGGGTCTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAGCTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACATTGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGGTTATGAGCAAGTGCCCTGCTTCTCCAATAATCCCTCTCAACAGCCATCGTCGTCGATGAATGTTCCGTTGACATCGGCCATGGTTGATCAAGAGCAAAACAATATGGGTAGGGCGATCAAGGATGTGCTGAGCCAATTCACCAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATTTGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTTCGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATGTGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGCAAAAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTGTGTACTAGGGTGTGAT-AAAAAAAATTAGTGCATGATGCTAAAAAAAAAAAAT]

[+] EMBL AK063648             [GAACCAAGAAAAGTCTCTCTCTCCTCTCCTCTCTTCTTCATCAACACACACTGGTTGACCAACCAGCTAGCTGATCGAGTTCGTTGTTTACCATCCTATTAATACCCCTTCCTCTCTCTCTTCTCCCCTCCTGAATTTCTCTCTTGGTAGAGGTAGAATTGATCTCCTTTCTTGTTCTTCTTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGATCCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATGAGCGGGATGAATTCGCTGAGCATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGGTTCCACCCGCGAGACGACGAGCTCGTGCTGGACTACCTGGAAAGGAAGCTCCTCGACGGCGGCGTGGGCGGCGCCGCGGCGGCGGCGGCGGCGGTCACCATCTACGGCTGCCCGGTGATGGTCGACGTCGATCTCAACAAGTGCGAGCCATGGGACCTTCCTGAGATCGCTTGCGTTGGTGGCAAGGAGTGGTACTTCTATAGCCTTAGGGATAGGAAGTATGCAACTGGCCAACGAACAAATAGAGCAACCGAATCGGGCTACTGGAAGGCCACAGGAAAAGATCGCCCAATAAGCCGGAAAGGATTGCTCGTCGGTATGCGAAAAACCCTGGTGTTCTACAAAGGTAGAGCCCCTAAGGGGAAGAAGACCGAGTGGGTCATGCATGAATTCCGCAAAGAAGGACAAGGGGATCCGATGAAGTTGCCTCTCAAGGAGGACTGGGTCTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAGCTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACATTGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGGTTATGAGCAAGTGCCCTGCTTCTCCAATAATCCCTCTCAACAGCCATCGTCGTCGATGAATGTTCCGTTGACATCGGCCATGGTTGATCAAGAGCAAAACAATATGGGTAGGGCGATCAAGGATGTGCTGAGCCAATTCACCAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATTTGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTTCGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATGTGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGCAAAAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTGTGTACTAGGGTGTGAT AAAAAAAATTAGTGCATGATGCTAAAA         ]
[+] EMBL C28309               [                                                                                                                                                       GGTAGAATTNATCTCCTTTCTTGTNCTTCTTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGATCCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATNANCGGGATGAATTCNCTGAGCATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB097013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTTGCCTCTCAAGGAGGACCGGGTCTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAGCTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACATTGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGNTTATGAGCAAGTGCCCTGCTTCTCCAATAATCCCTCTCANNAGCCATCGTCGTCGNNGNATGTTCCGTTGACATCGGCCATGGTTGATCAAGAGCAAAACAATATGGGTAGGGCGANCAAGGATGTGCTGAGCCAATTCACCAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATTTGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTTCGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATGTGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGC  AAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTGTGTACTANGGTGTGATAAAAAAAAATTAGTGCATGATGCTAAAAAAAAAAAAT]




>consensus_4687#0
GAACCAAGAAAAGTCTCTCTCTCCTCTCCTCTCTTCTTCATCAACACACACTGGTTGACC
AACCAGCTAGCTGATCGAGTTCGTTGTTTACCATCCTATTAATACCCCTTCCTCTCTCTC
TTCTCCCCTCCTGAATTTCTCTCTTGGTAGAGGTAGAATTGATCTCCTTTCTTGTTCTTC
TTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGAT
CCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATGAGCGGGATGAATTCGCTGAG
CATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGGTTCCACCCGCGAGACGACGAGCTCGT
GCTGGACTACCTGGAAAGGAAGCTCCTCGACGGCGGCGTGGGCGGCGCCGCGGCGGCGGC
GGCGGCGGTCACCATCTACGGCTGCCCGGTGATGGTCGACGTCGATCTCAACAAGTGCGA
GCCATGGGACCTTCCTGAGATCGCTTGCGTTGGTGGCAAGGAGTGGTACTTCTATAGCCT
TAGGGATAGGAAGTATGCAACTGGCCAACGAACAAATAGAGCAACCGAATCGGGCTACTG
GAAGGCCACAGGAAAAGATCGCCCAATAAGCCGGAAAGGATTGCTCGTCGGTATGCGAAA
AACCCTGGTGTTCTACAAAGGTAGAGCCCCTAAGGGGAAGAAGACCGAGTGGGTCATGCA
TGAATTCCGCAAAGAAGGACAAGGGGATCCGATGAAGTTGCCTCTCAAGGAGGACTGGGT
CTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAG
CTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACAT
TGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGGTTATGAGCAAGTGCCCTGCTT
CTCCAATAATCCCTCTCAACAGCCATCGTCGTCGATGAATGTTCCGTTGACATCGGCCAT
GGTTGATCAAGAGCAAAACAATATGGGTAGGGCGATCAAGGATGTGCTGAGCCAATTCAC
CAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATT
TGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTT
CGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATG
TGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGCA
AAAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTG
TGTACTAGGGTGTGATAAAAAAAATTAGTGCATGATGCTAAAAAAAAAAAAT
clustalw multiple alignements is not computed in this case