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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4698 cluster # 4698       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4698#0 length = 668 sequences # 3  

consensusID : consensus_4698#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 668
fasta sequence
                              [TTTTTTGAAACCAGCAAGAAAANATTCACAACTAAGCCGGCTTGACAAGAGCCAAATTTCATTTACAAAAGCTGTTAAACTTGCTACTACATTACATGACTGTAGTATCAACTCTTCAAAGAGAAAAAGCAGAAGTAAAGTGAGGCAGGTTAATTAGGGGGTCTCAGGGCAGCTCTTTTATATGTGACAGAAGACAAGAGCTGCTCACTGAGGAAATTTCCCCATGTCAGGAAACATAAACAGAGAAAATGGAGCTTCTGAACATCTAACTATTAGATCAGCTGACACCTAACAGATTAGCATTTCCGTCAGTAGGTTGTATTGGACAGGTGATGTGG--TATAACTGAAACAACTAGCAGTCTGGCTGCTCCAATTTCACTGGTGTTTTTGTGGCGATATCTGCTGTTGTTGCTGCTGCTGATGCGCTATTTTGATCGCTGAGACTTCTGGCAACAACCAAATCACTGACAACATCAAAGTTCAGTCTTCCACTGACTTTCTTCCCACTGTTTAGGGCGGTTGTTTATAACCTTAAGGTCCTTGGAGGGGCTCTGAAATGCATGAGTACTCTCCCCT-CACAGGCGTAATAGCTCATGGAGCTTGGGGAAAGCAAAGTATCCATCTTTGATGTGCGCAAGGGTGAAACATATACGTTATGAGCAGCAGAA]

[+] EMBL CF328544             [TTTTTTGAAACCAGCAAGAAAANATTCACAACTAAGCCGGCTTGACAAGAGCCAAATTTCATTTACAAAAGCTGTTAAACTTGCTACTACATTACATGACTGTAGTATCAACTCTTCAAAGAGAAAAAGCAGAAGTAAAGTGAGGCAGGTTAATTAGGGGGTCTCAGGGCAGCTCTTTTATATGTGACAGAAGACAAGAGCTGCTCACTGAGGAAATTTCCCCATGTCAGGAAACATAAACAGAGAAAATGGAGCTTCTGAACATCTAACTATTAGATCAGCTGACACCTAACAGATTAGCATTTCCGTCAGTAGGTTGTATTGGACAGGTGATGTGG  TATAACTGAAACAACTAGCAGTCTGGCTGCTCCAATTTCACTGGTGTTTTTGTGGCGATATCTGCTGTTGTTGCTGCTGCTGATGCGCTATTTTGATCGCTGAGACTTCTGGCAACAACCAAATCACTGACAACATCAAAGTTCAGTCTTCCACTGACTTTCTTCCCACTGTTTAGGGCGGTTGTTTATAACCTTAAGGTCCTTGGAGGGGCTCTGAAATGCATGAGTACTCTCCCCT CACAGGCGTAATAGCTCATGGAGCTTGGGGAAAGCAAAGTATC                                                 ]
[+] EMBL CB627553             [                               CTAAGCCGGCTTGACAAGAGCCAAATTTCATTTACAAAAGCTGTTAAACTTGCTACTACATTACATGACTGTAGTATCAACTCTTCAAAGAGAAAAAGCAGAAGTAAAGTGAGGCAGGTTAATTAGGGGGTCTCAGGGCAGCTTTTTTATATGTGACAGAAGACAAGAGCTGCTCACTGAGGAAATTTCCCCATGTCAGGAAACATAAACAGAGAAAATGGAGCTTCTGAACATCTAACTATTAGATCAGCTGACACCTAACAGATTAGCATTTCCGTCAGTAGGTTGTATTGGACAGGTGATGTGGTATATAACTGAAACAACTAGCAGTCTGGCTGCTCCAATTTCACTGGTGTTTTTGTGGTGATATCTGCTGTTGTTGCTGCTGCTGATGCGCTATTTTGATCGCTGAGACTTCTGGCAACAAC                                                                                                                                                                                                                    ]
[-] EMBL CF328545             [                                                          TCATTTACAAAAGCTGTTAAACTTGCTACTACATTACATGACTGTAGTATCAACTCTTCAAAGAGAAAAAGCAGAAGTANAGTGAGGCAGGTTAATTAGGGGGTCTCAGGGCAGCTCTTTTATATGTGACAGAAGACAAGAGCTGCTCACTGAGGAAATTTCCCCATGTCAGGAAACATAAACAGAGAAAATGGAGCTTCTGAACATCTAACTATTAGATCAGCTGACACCTAACAGATTAGCATTTCCGTCAGTAGGTTGTATTGGACAGGTGATGTGG  TATAACTGAAACAACTAGCAGTCTGGCTGCTCCAATTTCACTGGTGTTTTTGTGGCGATATCTGCTGTTGTTGCTGCTGCTGATGCGCTATTTTGATCGCTGAGACTTCTGGCAACAACCAAATCACTGACAACATCAAAGTTCAGTCTTCCACTGACTTTCTTCCCACTGTTTA GGCGGTTGTTTATAACCTTAAGGTCCTTGGAGGGGCTCTGAAATGCATGAGTACTCTCCCCTACACAGGCGTAATAGCTCATGGAGCTTGGGGAAAGCAAAGTATCCATCTTTGATGTGCGCAAGGGTGAAACATATACGTTATGAGCAGCAGAA]


>consensus_4698#0 TTTTTTGAAACCAGCAAGAAAANATTCACAACTAAGCCGGCTTGACAAGAGCCAAATTTC ATTTACAAAAGCTGTTAAACTTGCTACTACATTACATGACTGTAGTATCAACTCTTCAAA GAGAAAAAGCAGAAGTAAAGTGAGGCAGGTTAATTAGGGGGTCTCAGGGCAGCTCTTTTA TATGTGACAGAAGACAAGAGCTGCTCACTGAGGAAATTTCCCCATGTCAGGAAACATAAA CAGAGAAAATGGAGCTTCTGAACATCTAACTATTAGATCAGCTGACACCTAACAGATTAG CATTTCCGTCAGTAGGTTGTATTGGACAGGTGATGTGGTATAACTGAAACAACTAGCAGT CTGGCTGCTCCAATTTCACTGGTGTTTTTGTGGCGATATCTGCTGTTGTTGCTGCTGCTG ATGCGCTATTTTGATCGCTGAGACTTCTGGCAACAACCAAATCACTGACAACATCAAAGT TCAGTCTTCCACTGACTTTCTTCCCACTGTTTAGGGCGGTTGTTTATAACCTTAAGGTCC TTGGAGGGGCTCTGAAATGCATGAGTACTCTCCCCTCACAGGCGTAATAGCTCATGGAGC TTGGGGAAAGCAAAGTATCCATCTTTGATGTGCGCAAGGGTGAAACATATACGTTATGAG CAGCAGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)