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Oryza sativa
cluster # 47 cluster # 47       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_47#0 length = 3650 sequences # 1  
 consensus_47#1 length = 737 sequences # 1  
consensusID : consensus_47#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3650
fasta sequence 
                              [CCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAGCTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCTTCCTTTTGATATCAACTTGTATGCATCTGACCATCAAGGAGAAATACATCCAGGTAACCTTGTAAACATGAATAGAAAACAATTGATCTTTGTAGATATGGCTTGCATAAATCACTCTAAAATCTTTGCCATTTCTCTGTAAAAATGATCTATAACATGTGCATTGATGCAATTGCTATCTTCTTGGAACAAAATTGATCTTTCATAAGATTGAGAAAACAATTAGGACTTGATTTTTTTTCTTTGATATTTACCAACTCAATTCTGTCTTTGATATTTATACATGTATCTACCTACAACTAATCATGATATGCTAGATTCTACATGGATAATTTCCTTTACAGTACTGGTATTGAGCTAAATTGTTTGTAGCTCAAGCAACATCATCTTAATATAAAGTAGGAATAAACATGAGAAATCAGAAAGCAAGACCACTGTTTTCGTCTATTTGTAAAATCATGAACTGGAATAAAAAACAAACAACTTTTGTATCTTCCTTTCTAATGTCATAATTTCAGCTAGTACTATAAAAGAAAGTTAGATTGTACCTCCAATGTTGTGCGCAAAGAGCTCTGAACTTCAGCACGATATATGGAACCATGGACCAATATAGAATAATCTGCATGGAACCATGGATCAATATAGAATAATCTGCATGCAAAAATTATTGTTTTTGGACATGTGTTAACGGCTGTTAAGTACTGAATTAATGCCGTCAATACTTACATAAGACCATAAATATAAAACATCCAATATAGTGGTAGAGTTTATTTCTAACAATTTCCATGAGTGTTGCTGTATATTCCTATGCAGGTGACAAACTACCAAAGTTGAGAGGAAATATACATGAAGGTGGAGGAGAATCAAACTCGTATCCGAACTTATGGAGTTTTGGACCCAGAAACCCAATTAAACACCTCCAAATGGACCAAACATTCATACCAATGGATTTAGGGGCCTAAAATGAGTGTCCAGGCCGAAAACCGAAGCGAACGGAGCCGTCCCAGGTTCGGCCGAACCCTGAGTACGGATGAACCCTCACGAAGGCCGTTGGCCCAGGCCAAAGTTGCGTTTGGTAGCAATCCGCTTACCAATGACGGTTATGGCCATTTTCACCGGTAGAAACCGTCATAACATGGACACTTGACAACACAAGAGAGAAGATGCTCTTTGGATGCTTGGAGGATCTCCACTCTCTCAAGTCACCTCCACACTATAAATACCCCTCTCCTCCCTCATTCTCACACACACCAAAGCATGAGCTGAATTATAAGAGGCTCTAGTATACTTTATTGTATATTAGATTAGGGAGAGAGTAAGGTAGAAGAAATCGGAGGAATTACGGAGTTGTCGGTAATCTTCTCTTAATTCTGTATCTTGTTAATTACTTTGCTTTAATAGAAATATCATTCTGAGTAATTAAGATTTACTTAGTGAGAATTACTTTTTGGTTAGTTCCTAATTAGCGTACAGGATCATTGTTCACTATAGTTTATTAATTTATAGTGATTGCTTTAGTGTTTGATCGGCACTAGAGTAGTTATTAATTGCGTAGACGCGGTGTCTAGGTAATTAATTTCCAGTGGTTGCTGCGTATCCCACAGTACGTTTGAGGTGGGTGTAGAGGTGGTGACAGCCCTCAAGAGAACTTAAGTCCTCCCTGTCCAGGTACGTAATAGAGCAACATCTGGAAACAGCGGGTTGCCAGTGCCTGAAGTATTGCGTTAGGATTAAAATTAAGCTTTCCCTAGACACTGTTTCTTATTAGGAAATCCTCTATGCCCTCTGCCCACATTAGCTTTGTGTCCTTGGATGAACCTGACGATGAGTTGAACTCACACGTTCCCTATGGAAATCGATACTCTGGAATACTCCCAGGTGAAGTGTTACATCTGTATCTTCTGTGCGCTTGCGGATTCTATCTATAACGTTAAGAAATACCAACAACATGGTACTCACATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAAGTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGATGCCGATGAGGAAGACCTACAAATGCATCCAGACATGCAAGAGTATGGCGTGTATGCGGGTGATGTGGAAGTTGTTTTCGAACAAGAGGAGTTGGATGATTCAGATCAGGAAGATGAACAACAAAACAAAAATCTGACCAAAATACAAAGGCAACAAATATATGCAGCATTGGCTGGAAAAACTAACAATGGAACCCTAAGAAAAAATGCTACAACTGAAGTTGCAGCAATGTTTAATGTGAAAAGGGCTAGAGTGCAAGCAATTTGGTGAAGAGTGAAGCAATGTCGTGCCAAGGGAATACCAATCGATGTAAGGTCTAGGAAAAAAAAGAATTGTGGTCGCAAAAAGAATGAAATCAACCTGACAGATGTTGCTAATGTTCCCTTGCAACTAAGGAGCACTTTACGGTCATTTGCATCAGCCTCAGGTATACCAAAGAACACGCTGCACAGGATGTTGATAGAAGGGCTGCTAAGACGTCACTCAAACACACTAAAGCCATTGTTGAAGGAAGAGAATAAACAATCAAGGCTGCGGTGGTGTCTTTCCATGTTAGATTGGCATACTTTGCCAAATGAACCCAAGTTCATTGATATGCGAAACATTGTGGACATAGATGAAAAATGGTTCAATACAACTAAAAGGACAAGAACCATTTACATGGTCAATTGGGAGGATGATCCATACAGACCTGTCCAAAACAAAAATTCTATTGATAAAGTGATGTTCTCGGCAGCAGTTGCTAGGTCTAGATACAATGAAGAAGGTATCTGCACTTTTGATGGCAAGATAGGCTTGTGGCCTTTCACCAGAAAGGAACCAGCTCAAAGGACAAGTCATATTAGATGAAGGGGGACTCTAGTCACCAAGACAATCAAGGTTGATCAAGATACCGTAAGGTCATTTCTGATTGCTAAAGTCCTACCAGCTATTATAGCAAGTTGGCCTCGAGAAGAAGCACACAACACTATATGGATTCAGCAGGATAATGCTCCCTCTCATGTCCCAGTGGATGATACTCAATTTGCCTATGCAGTTTCCCAAACAGGTCTTGCTTGTTAGAGGTTACGAAAGCTGATGGTGGAAATGGATACAAGATTCCTCATATGGGTAAAGAGAGGCTAGAGCGTCTAGACATTCTCCCCAATACACTTAGTTGTGGTTTTGAGCTATATGATAAGATTCCGGCAGTTCCGACGCTCCAGTTTATTTTGAAGTGGTCGCCGAGGTCCCGTCAGCTGAAGAGCAAGGCAATTCATACATATATCATTGATTATATTGAGCCTATTTGCAAAAACCCATGCTTTTCTCTCAAAATTGCATTACTTTTGTAATGTCATGTGGGATGGTTTTACCCATACTTAGCCTTTGTTACCCTGAGTCATTGATAGCTTGGGTTAATAATTTGACAAGATGATTGGTCTAGGATTGCTTAGCCATGCTTAGATCAACTATCTCACATTGGGATTCACTATAATATAGTCCTTAATT]

[+] EMBL AK065835             [CCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAGCTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCTTCCTTTTGATATCAACTTGTATGCATCTGACCATCAAGGAGAAATACATCCAGGTAACCTTGTAAACATGAATAGAAAACAATTGATCTTTGTAGATATGGCTTGCATAAATCACTCTAAAATCTTTGCCATTTCTCTGTAAAAATGATCTATAACATGTGCATTGATGCAATTGCTATCTTCTTGGAACAAAATTGATCTTTCATAAGATTGAGAAAACAATTAGGACTTGATTTTTTTTCTTTGATATTTACCAACTCAATTCTGTCTTTGATATTTATACATGTATCTACCTACAACTAATCATGATATGCTAGATTCTACATGGATAATTTCCTTTACAGTACTGGTATTGAGCTAAATTGTTTGTAGCTCAAGCAACATCATCTTAATATAAAGTAGGAATAAACATGAGAAATCAGAAAGCAAGACCACTGTTTTCGTCTATTTGTAAAATCATGAACTGGAATAAAAAACAAACAACTTTTGTATCTTCCTTTCTAATGTCATAATTTCAGCTAGTACTATAAAAGAAAGTTAGATTGTACCTCCAATGTTGTGCGCAAAGAGCTCTGAACTTCAGCACGATATATGGAACCATGGACCAATATAGAATAATCTGCATGGAACCATGGATCAATATAGAATAATCTGCATGCAAAAATTATTGTTTTTGGACATGTGTTAACGGCTGTTAAGTACTGAATTAATGCCGTCAATACTTACATAAGACCATAAATATAAAACATCCAATATAGTGGTAGAGTTTATTTCTAACAATTTCCATGAGTGTTGCTGTATATTCCTATGCAGGTGACAAACTACCAAAGTTGAGAGGAAATATACATGAAGGTGGAGGAGAATCAAACTCGTATCCGAACTTATGGAGTTTTGGACCCAGAAACCCAATTAAACACCTCCAAATGGACCAAACATTCATACCAATGGATTTAGGGGCCTAAAATGAGTGTCCAGGCCGAAAACCGAAGCGAACGGAGCCGTCCCAGGTTCGGCCGAACCCTGAGTACGGATGAACCCTCACGAAGGCCGTTGGCCCAGGCCAAAGTTGCGTTTGGTAGCAATCCGCTTACCAATGACGGTTATGGCCATTTTCACCGGTAGAAACCGTCATAACATGGACACTTGACAACACAAGAGAGAAGATGCTCTTTGGATGCTTGGAGGATCTCCACTCTCTCAAGTCACCTCCACACTATAAATACCCCTCTCCTCCCTCATTCTCACACACACCAAAGCATGAGCTGAATTATAAGAGGCTCTAGTATACTTTATTGTATATTAGATTAGGGAGAGAGTAAGGTAGAAGAAATCGGAGGAATTACGGAGTTGTCGGTAATCTTCTCTTAATTCTGTATCTTGTTAATTACTTTGCTTTAATAGAAATATCATTCTGAGTAATTAAGATTTACTTAGTGAGAATTACTTTTTGGTTAGTTCCTAATTAGCGTACAGGATCATTGTTCACTATAGTTTATTAATTTATAGTGATTGCTTTAGTGTTTGATCGGCACTAGAGTAGTTATTAATTGCGTAGACGCGGTGTCTAGGTAATTAATTTCCAGTGGTTGCTGCGTATCCCACAGTACGTTTGAGGTGGGTGTAGAGGTGGTGACAGCCCTCAAGAGAACTTAAGTCCTCCCTGTCCAGGTACGTAATAGAGCAACATCTGGAAACAGCGGGTTGCCAGTGCCTGAAGTATTGCGTTAGGATTAAAATTAAGCTTTCCCTAGACACTGTTTCTTATTAGGAAATCCTCTATGCCCTCTGCCCACATTAGCTTTGTGTCCTTGGATGAACCTGACGATGAGTTGAACTCACACGTTCCCTATGGAAATCGATACTCTGGAATACTCCCAGGTGAAGTGTTACATCTGTATCTTCTGTGCGCTTGCGGATTCTATCTATAACGTTAAGAAATACCAACAACATGGTACTCACATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAAGTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGATGCCGATGAGGAAGACCTACAAATGCATCCAGACATGCAAGAGTATGGCGTGTATGCGGGTGATGTGGAAGTTGTTTTCGAACAAGAGGAGTTGGATGATTCAGATCAGGAAGATGAACAACAAAACAAAAATCTGACCAAAATACAAAGGCAACAAATATATGCAGCATTGGCTGGAAAAACTAACAATGGAACCCTAAGAAAAAATGCTACAACTGAAGTTGCAGCAATGTTTAATGTGAAAAGGGCTAGAGTGCAAGCAATTTGGTGAAGAGTGAAGCAATGTCGTGCCAAGGGAATACCAATCGATGTAAGGTCTAGGAAAAAAAAGAATTGTGGTCGCAAAAAGAATGAAATCAACCTGACAGATGTTGCTAATGTTCCCTTGCAACTAAGGAGCACTTTACGGTCATTTGCATCAGCCTCAGGTATACCAAAGAACACGCTGCACAGGATGTTGATAGAAGGGCTGCTAAGACGTCACTCAAACACACTAAAGCCATTGTTGAAGGAAGAGAATAAACAATCAAGGCTGCGGTGGTGTCTTTCCATGTTAGATTGGCATACTTTGCCAAATGAACCCAAGTTCATTGATATGCGAAACATTGTGGACATAGATGAAAAATGGTTCAATACAACTAAAAGGACAAGAACCATTTACATGGTCAATTGGGAGGATGATCCATACAGACCTGTCCAAAACAAAAATTCTATTGATAAAGTGATGTTCTCGGCAGCAGTTGCTAGGTCTAGATACAATGAAGAAGGTATCTGCACTTTTGATGGCAAGATAGGCTTGTGGCCTTTCACCAGAAAGGAACCAGCTCAAAGGACAAGTCATATTAGATGAAGGGGGACTCTAGTCACCAAGACAATCAAGGTTGATCAAGATACCGTAAGGTCATTTCTGATTGCTAAAGTCCTACCAGCTATTATAGCAAGTTGGCCTCGAGAAGAAGCACACAACACTATATGGATTCAGCAGGATAATGCTCCCTCTCATGTCCCAGTGGATGATACTCAATTTGCCTATGCAGTTTCCCAAACAGGTCTTGCTTGTTAGAGGTTACGAAAGCTGATGGTGGAAATGGATACAAGATTCCTCATATGGGTAAAGAGAGGCTAGAGCGTCTAGACATTCTCCCCAATACACTTAGTTGTGGTTTTGAGCTATATGATAAGATTCCGGCAGTTCCGACGCTCCAGTTTATTTTGAAGTGGTCGCCGAGGTCCCGTCAGCTGAAGAGCAAGGCAATTCATACATATATCATTGATTATATTGAGCCTATTTGCAAAAACCCATGCTTTTCTCTCAAAATTGCATTACTTTTGTAATGTCATGTGGGATGGTTTTACCCATACTTAGCCTTTGTTACCCTGAGTCATTGATAGCTTGGGTTAATAATTTGACAAGATGATTGGTCTAGGATTGCTTAGCCATGCTTAGATCAACTATCTCACATTGGGATTCACTATAATATAGTCCTTAATT]




>consensus_47#0
CCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAG
CTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCTTCCTTTTGATATCAACTTGTAT
GCATCTGACCATCAAGGAGAAATACATCCAGGTAACCTTGTAAACATGAATAGAAAACAA
TTGATCTTTGTAGATATGGCTTGCATAAATCACTCTAAAATCTTTGCCATTTCTCTGTAA
AAATGATCTATAACATGTGCATTGATGCAATTGCTATCTTCTTGGAACAAAATTGATCTT
TCATAAGATTGAGAAAACAATTAGGACTTGATTTTTTTTCTTTGATATTTACCAACTCAA
TTCTGTCTTTGATATTTATACATGTATCTACCTACAACTAATCATGATATGCTAGATTCT
ACATGGATAATTTCCTTTACAGTACTGGTATTGAGCTAAATTGTTTGTAGCTCAAGCAAC
ATCATCTTAATATAAAGTAGGAATAAACATGAGAAATCAGAAAGCAAGACCACTGTTTTC
GTCTATTTGTAAAATCATGAACTGGAATAAAAAACAAACAACTTTTGTATCTTCCTTTCT
AATGTCATAATTTCAGCTAGTACTATAAAAGAAAGTTAGATTGTACCTCCAATGTTGTGC
GCAAAGAGCTCTGAACTTCAGCACGATATATGGAACCATGGACCAATATAGAATAATCTG
CATGGAACCATGGATCAATATAGAATAATCTGCATGCAAAAATTATTGTTTTTGGACATG
TGTTAACGGCTGTTAAGTACTGAATTAATGCCGTCAATACTTACATAAGACCATAAATAT
AAAACATCCAATATAGTGGTAGAGTTTATTTCTAACAATTTCCATGAGTGTTGCTGTATA
TTCCTATGCAGGTGACAAACTACCAAAGTTGAGAGGAAATATACATGAAGGTGGAGGAGA
ATCAAACTCGTATCCGAACTTATGGAGTTTTGGACCCAGAAACCCAATTAAACACCTCCA
AATGGACCAAACATTCATACCAATGGATTTAGGGGCCTAAAATGAGTGTCCAGGCCGAAA
ACCGAAGCGAACGGAGCCGTCCCAGGTTCGGCCGAACCCTGAGTACGGATGAACCCTCAC
GAAGGCCGTTGGCCCAGGCCAAAGTTGCGTTTGGTAGCAATCCGCTTACCAATGACGGTT
ATGGCCATTTTCACCGGTAGAAACCGTCATAACATGGACACTTGACAACACAAGAGAGAA
GATGCTCTTTGGATGCTTGGAGGATCTCCACTCTCTCAAGTCACCTCCACACTATAAATA
CCCCTCTCCTCCCTCATTCTCACACACACCAAAGCATGAGCTGAATTATAAGAGGCTCTA
GTATACTTTATTGTATATTAGATTAGGGAGAGAGTAAGGTAGAAGAAATCGGAGGAATTA
CGGAGTTGTCGGTAATCTTCTCTTAATTCTGTATCTTGTTAATTACTTTGCTTTAATAGA
AATATCATTCTGAGTAATTAAGATTTACTTAGTGAGAATTACTTTTTGGTTAGTTCCTAA
TTAGCGTACAGGATCATTGTTCACTATAGTTTATTAATTTATAGTGATTGCTTTAGTGTT
TGATCGGCACTAGAGTAGTTATTAATTGCGTAGACGCGGTGTCTAGGTAATTAATTTCCA
GTGGTTGCTGCGTATCCCACAGTACGTTTGAGGTGGGTGTAGAGGTGGTGACAGCCCTCA
AGAGAACTTAAGTCCTCCCTGTCCAGGTACGTAATAGAGCAACATCTGGAAACAGCGGGT
TGCCAGTGCCTGAAGTATTGCGTTAGGATTAAAATTAAGCTTTCCCTAGACACTGTTTCT
TATTAGGAAATCCTCTATGCCCTCTGCCCACATTAGCTTTGTGTCCTTGGATGAACCTGA
CGATGAGTTGAACTCACACGTTCCCTATGGAAATCGATACTCTGGAATACTCCCAGGTGA
AGTGTTACATCTGTATCTTCTGTGCGCTTGCGGATTCTATCTATAACGTTAAGAAATACC
AACAACATGGTACTCACATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAAG
TTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGATG
CCGATGAGGAAGACCTACAAATGCATCCAGACATGCAAGAGTATGGCGTGTATGCGGGTG
ATGTGGAAGTTGTTTTCGAACAAGAGGAGTTGGATGATTCAGATCAGGAAGATGAACAAC
AAAACAAAAATCTGACCAAAATACAAAGGCAACAAATATATGCAGCATTGGCTGGAAAAA
CTAACAATGGAACCCTAAGAAAAAATGCTACAACTGAAGTTGCAGCAATGTTTAATGTGA
AAAGGGCTAGAGTGCAAGCAATTTGGTGAAGAGTGAAGCAATGTCGTGCCAAGGGAATAC
CAATCGATGTAAGGTCTAGGAAAAAAAAGAATTGTGGTCGCAAAAAGAATGAAATCAACC
TGACAGATGTTGCTAATGTTCCCTTGCAACTAAGGAGCACTTTACGGTCATTTGCATCAG
CCTCAGGTATACCAAAGAACACGCTGCACAGGATGTTGATAGAAGGGCTGCTAAGACGTC
ACTCAAACACACTAAAGCCATTGTTGAAGGAAGAGAATAAACAATCAAGGCTGCGGTGGT
GTCTTTCCATGTTAGATTGGCATACTTTGCCAAATGAACCCAAGTTCATTGATATGCGAA
ACATTGTGGACATAGATGAAAAATGGTTCAATACAACTAAAAGGACAAGAACCATTTACA
TGGTCAATTGGGAGGATGATCCATACAGACCTGTCCAAAACAAAAATTCTATTGATAAAG
TGATGTTCTCGGCAGCAGTTGCTAGGTCTAGATACAATGAAGAAGGTATCTGCACTTTTG
ATGGCAAGATAGGCTTGTGGCCTTTCACCAGAAAGGAACCAGCTCAAAGGACAAGTCATA
TTAGATGAAGGGGGACTCTAGTCACCAAGACAATCAAGGTTGATCAAGATACCGTAAGGT
CATTTCTGATTGCTAAAGTCCTACCAGCTATTATAGCAAGTTGGCCTCGAGAAGAAGCAC
ACAACACTATATGGATTCAGCAGGATAATGCTCCCTCTCATGTCCCAGTGGATGATACTC
AATTTGCCTATGCAGTTTCCCAAACAGGTCTTGCTTGTTAGAGGTTACGAAAGCTGATGG
TGGAAATGGATACAAGATTCCTCATATGGGTAAAGAGAGGCTAGAGCGTCTAGACATTCT
CCCCAATACACTTAGTTGTGGTTTTGAGCTATATGATAAGATTCCGGCAGTTCCGACGCT
CCAGTTTATTTTGAAGTGGTCGCCGAGGTCCCGTCAGCTGAAGAGCAAGGCAATTCATAC
ATATATCATTGATTATATTGAGCCTATTTGCAAAAACCCATGCTTTTCTCTCAAAATTGC
ATTACTTTTGTAATGTCATGTGGGATGGTTTTACCCATACTTAGCCTTTGTTACCCTGAG
TCATTGATAGCTTGGGTTAATAATTTGACAAGATGATTGGTCTAGGATTGCTTAGCCATG
CTTAGATCAACTATCTCACATTGGGATTCACTATAATATAGTCCTTAATT

consensusID : consensus_47#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 737
fasta sequence 
                              [AATATCCTGATTTTCTTATTACATAAAATCGGAATTTATTTGCAAGATGAGGAAGGACACGTGGTCCAATCAGCTGGCTGGAGATCCAGCCAGCTTTAGAAGTATAGATATACCATTAGATGAGGGAGATGAACAGGCTGTACCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAGCTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCTTCCTTTTGATATCAACTTGTATGCATCTCCAATGTTGTGCGCAAAGAGCTCTGAACTTCAGCACGATATATGGAACCATGGACCAATATAGAATAATATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAAGTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGATGCCGATGAGGAAGACCGATTTTTCCAAGGCATCTTGGTCTTGCATGAGTTCTTCTAGGCCTCTATCATCGTATGGATCTTGCGCATATCCCCCAATGACCATGCCAACATCATTGTCGCTATCCTTCATCTCCTCGCTGCTCCCCTCCTCGCTGATCACATCCTTAGCTTTTCCACTCGTATCCTCAATGTTGATTTGCCCGACGAGTGCCTTCTCGAAGAGGGGCTTGTGGTCGCTATCGTCTTCCAATATTGTCCTCCTTGATCTGTGCAGCCCTGTTCTCACGCTGGTTTCTATG]

[-] EMBL AK066957             [AATATCCTGATTTTCTTATTACATAAAATCGGAATTTATTTGCAAGATGAGGAAGGACACGTGGTCCAATCAGCTGGCTGGAGATCCAGCCAGCTTTAGAAGTATAGATATACCATTAGATGAGGGAGATGAACAGGCTGTACCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAGCTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCTTCCTTTTGATATCAACTTGTATGCATCTCCAATGTTGTGCGCAAAGAGCTCTGAACTTCAGCACGATATATGGAACCATGGACCAATATAGAATAATATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAAGTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGATGCCGATGAGGAAGACCGATTTTTCCAAGGCATCTTGGTCTTGCATGAGTTCTTCTAGGCCTCTATCATCGTATGGATCTTGCGCATATCCCCCAATGACCATGCCAACATCATTGTCGCTATCCTTCATCTCCTCGCTGCTCCCCTCCTCGCTGATCACATCCTTAGCTTTTCCACTCGTATCCTCAATGTTGATTTGCCCGACGAGTGCCTTCTCGAAGAGGGGCTTGTGGTCGCTATCGTCTTCCAATATTGTCCTCCTTGATCTGTGCAGCCCTGTTCTCACGCTGGTTTCTATG]




>consensus_47#1
AATATCCTGATTTTCTTATTACATAAAATCGGAATTTATTTGCAAGATGAGGAAGGACAC
GTGGTCCAATCAGCTGGCTGGAGATCCAGCCAGCTTTAGAAGTATAGATATACCATTAGA
TGAGGGAGATGAACAGGCTGTACCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGT
GGCTGATCAAGAGGATGACCAGCTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCT
TCCTTTTGATATCAACTTGTATGCATCTCCAATGTTGTGCGCAAAGAGCTCTGAACTTCA
GCACGATATATGGAACCATGGACCAATATAGAATAATATGGTATTTGTTATTGTAGACGA
TGCCGATGCCATGGATCAAGTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCC
TTTTGATCTCAACTTTGATGCCGATGAGGAAGACCGATTTTTCCAAGGCATCTTGGTCTT
GCATGAGTTCTTCTAGGCCTCTATCATCGTATGGATCTTGCGCATATCCCCCAATGACCA
TGCCAACATCATTGTCGCTATCCTTCATCTCCTCGCTGCTCCCCTCCTCGCTGATCACAT
CCTTAGCTTTTCCACTCGTATCCTCAATGTTGATTTGCCCGACGAGTGCCTTCTCGAAGA
GGGGCTTGTGGTCGCTATCGTCTTCCAATATTGTCCTCCTTGATCTGTGCAGCCCTGTTC
TCACGCTGGTTTCTATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_47#0      CCTAATCTCAATGAAGCAGTGGCTGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAG 60
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CTTGGAGGTGATCTCCACGGAGGTGCCATCCATGTGCTTCCTTTTGATATCAACTTGTAT 120
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GCATCTGACCATCAAGGAGAAATACATCCAGGTAACCTTGTAAACATGAATAGAAAACAA 180
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTGATCTTTGTAGATATGGCTTGCATAAATCACTCTAAAATCTTTGCCATTTCTCTGTAA 240
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AAATGATCTATAACATGTGCATTGATGCAATTGCTATCTTCTTGGAACAAAATTGATCTT 300
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TCATAAGATTGAGAAAACAATTAGGACTTGATTTTTTTTCTTTGATATTTACCAACTCAA 360
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTCTGTCTTTGATATTTATACATGTATCTACCTACAACTAATCATGATATGCTAGATTCT 420
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ACATGGATAATTTCCTTTACAGTACTGGTATTGAGCTAAATTGTTTGTAGCTCAAGCAAC 480
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ATCATCTTAATATAAAGTAGGAATAAACATGAGAAATCAGAAAGCAAGACCACTGTTTTC 540
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GTCTATTTGTAAAATCATGAACTGGAATAAAAAACAAACAACTTTTGTATCTTCCTTTCT 600
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AATGTCATAATTTCAGCTAGTACTATAAAAGAAAGTTAGATTGTACCTCCAATGTTGTGC 660
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GCAAAGAGCTCTGAACTTCAGCACGATATATGGAACCATGGACCAATATAGAATAATCTG 720
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CATGGAACCATGGATCAATATAGAATAATCTGCATGCAAAAATTATTGTTTTTGGACATG 780
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TGTTAACGGCTGTTAAGTACTGAATTAATGCCGTCAATACTTACATAAGACCATAAATAT 840
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AAAACATCCAATATAGTGGTAGAGTTTATTTCTAACAATTTCCATGAGTGTTGCTGTATA 900
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTCCTATGCAGGTGACAAACTACCAAAGTTGAGAGGAAATATACATGAAGGTGGAGGAGA 960
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ATCAAACTCGTATCCGAACTTATGGAGTTTTGGACCCAGAAACCCAATTAAACACCTCCA 1020
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AATGGACCAAACATTCATACCAATGGATTTAGGGGCCTAAAATGAGTGTCCAGGCCGAAA 1080
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ACCGAAGCGAACGGAGCCGTCCCAGGTTCGGCCGAACCCTGAGTACGGATGAACCCTCAC 1140
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GAAGGCCGTTGGCCCAGGCCAAAGTTGCGTTTGGTAGCAATCCGCTTACCAATGACGGTT 1200
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ATGGCCATTTTCACCGGTAGAAACCGTCATAACATGGACACTTGACAACACAAGAGAGAA 1260
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GATGCTCTTTGGATGCTTGGAGGATCTCCACTCTCTCAAGTCACCTCCACACTATAAATA 1320
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CCCCTCTCCTCCCTCATTCTCACACACACCAAAGCATGAGCTGAATTATAAGAGGCTCTA 1380
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GTATACTTTATTGTATATTAGATTAGGGAGAGAGTAAGGTAGAAGAAATCGGAGGAATTA 1440
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CGGAGTTGTCGGTAATCTTCTCTTAATTCTGTATCTTGTTAATTACTTTGCTTTAATAGA 1500
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AATATCATTCTGAGTAATTAAGATTTACTTAGTGAGAATTACTTTTTGGTTAGTTCCTAA 1560
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTAGCGTACAGGATCATTGTTCACTATAGTTTATTAATTTATAGTGATTGCTTTAGTGTT 1620
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TGATCGGCACTAGAGTAGTTATTAATTGCGTAGACGCGGTGTCTAGGTAATTAATTTCCA 1680
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GTGGTTGCTGCGTATCCCACAGTACGTTTGAGGTGGGTGTAGAGGTGGTG-ACAGCCCTC 1739
consensus_47#1      ----------AATATCCTGATTTTCTTATTACATAAAATCGGAATTTATTTGCAAGATGA 50
                                *****     * * * * *  *       **  *  *   **      

consensus_47#0      AAGAGAACTTAAGTCCTCCCTGTCCAGGTACGTAATAGAGCAACATCTGGAAACAGCGGG 1799
consensus_47#1      GGAAGGACACGTGGTCCAATCAGCTGGCTG-GAGATCCAGCCAGCTTTAGAAGTATAGAT 109
                       ** **    *  *       *  * *  *  **  *** *  * * ***  *  *  

consensus_47#0      TTGCCAGTGCCTGAAGTATTGCGTTAGGATTAAAATTAAGCTTTCCCTAGACACTGTTTC 1859
consensus_47#1      ATACCATTAGATGAGGGAG-ATGAACAGGCTGTACCTAATCT---CAATGAAGCAGTGGC 165
                     * *** *   *** * *    *    *  *  *  *** **   *   **  * **  *

consensus_47#0      TTATTAGGAAATCCTCTATGCCCTCTGCCCACATTAGCTTTGTGTCCTTGGATGAACCTG 1919
consensus_47#1      TGAAGAAGCAGCAGTGGCTGATCAAGAGGATGACCAGCTTGG-------AGGTGATCTCC 218
                    * *  * * *    *   **  *         *  ***** *        * *** *   

consensus_47#0      ACGATGAGTTGAACTCACACGTTCCCTATGGAAATCGATACTCTGGAATACTCCCAGGTG 1979
consensus_47#1      ACGG-AGGTGCCATCCATGTGCTTCCTTTTGATATCAA----CTTGTATGCATC----TC 269
                    ***    **   *  **   * * *** * ** *** *    ** * ** *  *    * 

consensus_47#0      AAGTGTTACATCTGTATCTTCTGTGCGCTTGCGGATTCTATCTATAACGTTAAGAAATAC 2039
consensus_47#1      CAATGTTGTGCGCAAAGAG-CTCTGAACTTCAGCACGATATATGGAACCATGG------- 321
                     * ****        *    ** **  ***  * *   *** *  ***  *         

consensus_47#0      CAACAACATGGTACTCACATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAA 2099
consensus_47#1      -ACCAATATAG-AATAATATGGTATTTGTTATTGTAGACGATGCCGATGCCATGGATCAA 379
                     * *** ** * * * * ******************************************

consensus_47#0      GTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGAT 2159
consensus_47#1      GTTCTGCAAGTAAATGGAGGTCACAACCATAATGCCTTTCCTTTTGATCTCAACTTTGAT 439
                    ************************************************************

consensus_47#0      GCCGATGAGGAAGACCTACAAATGCATCCAGACATGCAAGAGTATGGCGTGTATGCGGGT 2219
consensus_47#1      GCCGATGAGGAAGACC----GATTTTTCCAAG------------------GCATCTTGGT 477
                    ****************     **   ****                    * **   ***

consensus_47#0      GATGTGGAAGTTGTTTTCGAACAAGAGGAGTTGGATGATTCAGATCAGGAAGATGAACAA 2279
consensus_47#1      CTTGCATGAGTTCTTCTAGGCCTCTATCATCGTATGGATCTTGCGCATATCCCCCAATGA 537
                      **    **** ** * *  *   *  *       ***   *  **        **  *

consensus_47#0      CAAAACAAAAATC-TGACCAAAATACAAAGGCAACAAATATATGCAGCATTGGCTGGAAA 2338
consensus_47#1      CCATGCCAACATCATTGTCGCTATCCTTCATCTCCTCGCTGCTCCCCTCCTCGCTG---- 593
                    * *  * ** *** *   *   ** *     *  *       * *     * ****    

consensus_47#0      AACTAACAATGGAACCCTAAGAAAAAATGCTACAACTGAAGTTGCAGCAATGTTTAATGT 2398
consensus_47#1      --------ATCACATCCTTAGC-----TTTTCCACTCGTATCCTCAATGTTGATTTGCCC 640
                            **   * *** **      *  * **   * *    **    ** **     

consensus_47#0      GAAAAGGGCTAGAGTGCAAGCAATTTGGTGAAGAGTGAAGCAATGTCGTGCCAAGGGAAT 2458
consensus_47#1      GACGAGTGCCTTCTCGAAGAGGGGCTTGTG------GTCGCTATCGTCTTCCAATATTGT 694
                    **  ** **      * *       * ***      *  ** **    * ****     *

consensus_47#0      ACCAATCGAT--GTAAGGTCTAGGAAAAAAAAGAATTGTGGTCGCAAAAAGAATGAAATC 2516
consensus_47#1      CCTCCTTGATCTGTGCAGCCCTGTTCTCACGCTGGTTTCTATG----------------- 737
                     *   * ***  **   * *  *     *      **    *                  

consensus_47#0      AACCTGACAGATGTTGCTAATGTTCCCTTGCAACTAAGGAGCACTTTACGGTCATTTGCA 2576
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TCAGCCTCAGGTATACCAAAGAACACGCTGCACAGGATGTTGATAGAAGGGCTGCTAAGA 2636
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CGTCACTCAAACACACTAAAGCCATTGTTGAAGGAAGAGAATAAACAATCAAGGCTGCGG 2696
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TGGTGTCTTTCCATGTTAGATTGGCATACTTTGCCAAATGAACCCAAGTTCATTGATATG 2756
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CGAAACATTGTGGACATAGATGAAAAATGGTTCAATACAACTAAAAGGACAAGAACCATT 2816
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TACATGGTCAATTGGGAGGATGATCCATACAGACCTGTCCAAAACAAAAATTCTATTGAT 2876
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AAAGTGATGTTCTCGGCAGCAGTTGCTAGGTCTAGATACAATGAAGAAGGTATCTGCACT 2936
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTTGATGGCAAGATAGGCTTGTGGCCTTTCACCAGAAAGGAACCAGCTCAAAGGACAAGT 2996
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CATATTAGATGAAGGGGGACTCTAGTCACCAAGACAATCAAGGTTGATCAAGATACCGTA 3056
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      AGGTCATTTCTGATTGCTAAAGTCCTACCAGCTATTATAGCAAGTTGGCCTCGAGAAGAA 3116
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      GCACACAACACTATATGGATTCAGCAGGATAATGCTCCCTCTCATGTCCCAGTGGATGAT 3176
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ACTCAATTTGCCTATGCAGTTTCCCAAACAGGTCTTGCTTGTTAGAGGTTACGAAAGCTG 3236
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ATGGTGGAAATGGATACAAGATTCCTCATATGGGTAAAGAGAGGCTAGAGCGTCTAGACA 3296
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTCTCCCCAATACACTTAGTTGTGGTTTTGAGCTATATGATAAGATTCCGGCAGTTCCGA 3356
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CGCTCCAGTTTATTTTGAAGTGGTCGCCGAGGTCCCGTCAGCTGAAGAGCAAGGCAATTC 3416
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      ATACATATATCATTGATTATATTGAGCCTATTTGCAAAAACCCATGCTTTTCTCTCAAAA 3476
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TTGCATTACTTTTGTAATGTCATGTGGGATGGTTTTACCCATACTTAGCCTTTGTTACCC 3536
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      TGAGTCATTGATAGCTTGGGTTAATAATTTGACAAGATGATTGGTCTAGGATTGCTTAGC 3596
consensus_47#1      ------------------------------------------------------------
                                                                                

consensus_47#0      CATGCTTAGATCAACTATCTCACATTGGGATTCACTATAATATAGTCCTTAATT 3650
consensus_47#1      ------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)