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Oryza sativa
cluster # 4703 cluster # 4703       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4703#0 length = 2745 sequences # 3  

consensusID : consensus_4703#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2745
fasta sequence
                              [GCCGCACTCAATGGACAATCGTAACCATGGGCGGTGCTCGTTGCCGCGGCTCGCCGTTGGCGCCGCCGTCCTCCTCCTCGCCGTCTCCCTAGCGGCCACGCCGGCGGCGAGCCATGCCGGGCACGATGACACCGGCTTGCACAGCAACTACCTCGTCATCGTGCGCAAGCCGTACGCGTACGACACGAACCTGTACAAGAACGTGTCGAGCTGGCACGCGTCGCTGGTGGCGTCGGTGTGCGACATGGCGAAGGAGGCGCTGGAGAGGGACCCCTCCTCCGTGTCCCGGCTCATCTACTCCTACCGCAACGTCGTCAATGGCTTCGCCGCCCGCCTGACGCCGGAGGAGGTGGAGGAGATGTCCAAGAACGACTGGTTCATCCGCGCCGACCCGGAGAAGACGTACCAGCTCCAGACCACCCACACGCCGCAGCTGCTCGGCCTCATGGGCGGCGCCCGCCGCGGCGGCGTGTGGAACACCAGCAACATGGGCGAGGGCATCATCATCGGGATCCTCGACGACGGCATCTACGCCGGGCACCCGTCGTTCGACGGGGCGGGCATGAAGCCGCCGCCGGCCAAGTGGAGCGGCCGGTGCGACTTCAACAAGACGGTGTGCAACAACAAGCTCATCGGAGCGCGCTCCTACTTCGAGTCGGCGAAGTGGAAGTGGAAAGGGCTGCGCGACCCGGTCCTGCCGATCAACGAGGGGCAGCACGGGACGCACACGTCCAGCACGGCGGCCGGCTCGTTCGTGCCCGGCGCCAACGTCTCCGGCTACGCGGTCGGCACGGCGGGCGGCATGGCCCCCCGCGCGCACATCGCCTTCTACCAGGTGTGCTACGTGGAGAAGGGCTGCGACCGCGACGACATACTGGCGGCGGTGGACGACGCCCTCGAGGACGGCGTCGACATCCTGTCGCTGTCGCTCGGCGACGAGCAGGCCGGCGACTTCTCCGACGACCCGGTCTCGCTCGGAGGCTACAGCGCTGCCATGCATGGCGTGCTGGTCAGCGCGGCCGGCGGCAACACCGGCCCGGGACCGAGCACCGTCGTCAACGAGGCGCCGTGGGTTATCACCGTGGGGGCAGGCACCACCGACCGGCGGTTCGTCGCCACCGTGAAGCTTGGAAGCGGGGTTAGCCTCGACGGCGAGTCGCTCAGCGAGCCCAAGGACTTCGGAGCCGAGATGCGGCCGCTGGTGCACGACGTGGGCGACGGCATGTGCACCACCGAGAGCGTACTGAGGGCGATGAATGTCACCGGTAAGATCATCATCTGCGATGCTGGTGGCGACGTGAGCGTCGCGAAGGCCAAGTTGGTGCTCCGCTCCGGCGCCGCCGGCATGATCGTCATCGCCCCTCAGGTGTACGGTTCGGTGATCGTCCCGAGGCCGCACGTCCTCCCGACGGTGCAGATGCCATTCATGATAGGGCAGAAGATCAAGGCTTACATCCGGAGCACGCCGAGCCCGACGGCGAACTTCATCTTCAAAGGGACAGTGTTCAAAGCGAAGTCGCCGGTGGCCGCGCCCTTCTCGTCGCGGGGGCCGAACAGGCGGAGCAGGGGGATCCTCAAGCCCGACATCATAGGCCCCGGAGTGAACATCCTCGCCGGCGTCCCCAAGATCGAGGACTTGGCGCTCGGGGCCGAGGAAGTGATGCCCAAGTTTGACATCAAGTCCGGCACCTCCATGGCCGCGCCGCACATCAGCGGGGTCGCCGCGCTGATCAAGAACGCGCACCCGACGTGGTCGCCGGCCGCCATCAAGTCGGCCATGATGACGACGGCCGATTACACCGACAACCTCCGGAAGCCGATAACCGACGTGGACGGCGCGCCGGCGACCTACTACGCCATCGGCGCCGGCTACGTGAACGCGCGGAAAGCCATCGACCCGGGGCTCGTGTACAACCTGTCGTCGCTGGACTACATCCCCTACCTCTGCGGGCTCGGGTACAAGGACCAGAAGGTGAACTCGATCATCCACCCGGGGCCGGCGGTGGAGTGCGCCAAGATGCCCAAGGTCGATCAGAAGGATCTCAACTACCCGTCCATCACGGCCGTCCTGGACATGGAGCCGTACGAGGTGAGCATCAACCGGTCGGCGACGAACGTCGGGGCGGCCACCTCGACGTACGCCGTGGAGGTGGACGTGCCGGCGACGCTGGCGGTGGAGGTGAACCCGGCGAAGCTGGAGTTCAGGGCGCTGAACGAGGTGCTGAACTACACGGTCACCGTCAAGACGGCCTCCGGCAAGGCGCCGGCCAGCACGATCGAGGGGCAGCTGAAGTGGGTGTCGGGGAAAAAGTACGTGGTGCGCAGCCCGATCCTCGTCTGTGCCGGCACCGGCGGC-AAGAGCGCCGCCT-CCATGGGGGCTGCACCGGCGTAGAGCACTGGTCGAGCGGAGCCTAAGAGATAGCAGCTTGATGATGATTACTAGATTGCCACGCGTGTTAACGTTTGATGGTGCTTTACTCTTCGCTCGGTAGGTTTAGGCTCATGTATGTGGAGGCTAGCGAATTAATCCTTTCCTCCGCGGAAGTGGGGTGACGGGTTTTTCTTGCTGTTTTTACCACTAGTGCACGCGGCTGATCTTGACCATTCATTGATTTTGTACTCCAGGGGACGAGATGTGATTTCATCCCCGGCCCCTTAATCATGATATATGTTCATTTATTCTTTTTTTCCTGTTTCTCAAATAGATGCAGACGTGACACTCCTCTCAAATAGATGCTGGTGTGT]

[+] EMBL AK100861             [GCCGCACTCAATGGACAATCGTAACCATGGGCGGTGCTCGTTGCCGCGGCTCGCCGTTGGCGCCGCCGTCCTCCTCCTCGCCGTCTCCCTAGCGGCCACGCCGGCGGCGAGCCATGCCGGGCACGATGACACCGGCTTGCACAGCAACTACCTCGTCATCGTGCGCAAGCCGTACGCGTACGACACGAACCTGTACAAGAACGTGTCGAGCTGGCACGCGTCGCTGGTGGCGTCGGTGTGCGACATGGCGAAGGAGGCGCTGGAGAGGGACCCCTCCTCCGTGTCCCGGCTCATCTACTCCTACCGCAACGTCGTCAATGGCTTCGCCGCCCGCCTGACGCCGGAGGAGGTGGAGGAGATGTCCAAGAACGACTGGTTCATCCGCGCCGACCCGGAGAAGACGTACCAGCTCCAGACCACCCACACGCCGCAGCTGCTCGGCCTCATGGGCGGCGCCCGCCGCGGCGGCGTGTGGAACACCAGCAACATGGGCGAGGGCATCATCATCGGGATCCTCGACGACGGCATCTACGCCGGGCACCCGTCGTTCGACGGGGCGGGCATGAAGCCGCCGCCGGCCAAGTGGAGCGGCCGGTGCGACTTCAACAAGACGGTGTGCAACAACAAGCTCATCGGAGCGCGCTCCTACTTCGAGTCGGCGAAGTGGAAGTGGAAAGGGCTGCGCGACCCGGTCCTGCCGATCAACGAGGGGCAGCACGGGACGCACACGTCCAGCACGGCGGCCGGCTCGTTCGTGCCCGGCGCCAACGTCTCCGGCTACGCGGTCGGCACGGCGGGCGGCATGGCCCCCCGCGCGCACATCGCCTTCTACCAGGTGTGCTACGTGGAGAAGGGCTGCGACCGCGACGACATACTGGCGGCGGTGGACGACGCCCTCGAGGACGGCGTCGACATCCTGTCGCTGTCGCTCGGCGACGAGCAGGCCGGCGACTTCTCCGACGACCCGGTCTCGCTCGGAGGCTACAGCGCTGCCATGCATGGCGTGCTGGTCAGCGCGGCCGGCGGCAACACCGGCCCGGGACCGAGCACCGTCGTCAACGAGGCGCCGTGGGTTATCACCGTGGGGGCAGGCACCACCGACCGGCGGTTCGTCGCCACCGTGAAGCTTGGAAGCGGGGTTAGCCTCGACGGCGAGTCGCTCAGCGAGCCCAAGGACTTCGGAGCCGAGATGCGGCCGCTGGTGCACGACGTGGGCGACGGCATGTGCACCACCGAGAGCGTACTGAGGGCGATGAATGTCACCGGTAAGATCATCATCTGCGATGCTGGTGGCGACGTGAGCGTCGCGAAGGCCAAGTTGGTGCTCCGCTCCGGCGCCGCCGGCATGATCGTCATCGCCCCTCAGGTGTACGGTTCGGTGATCGTCCCGAGGCCGCACGTCCTCCCGACGGTGCAGATGCCATTCATGATAGGGCAGAAGATCAAGGCTTACATCCGGAGCACGCCGAGCCCGACGGCGAACTTCATCTTCAAAGGGACAGTGTTCAAAGCGAAGTCGCCGGTGGCCGCGCCCTTCTCGTCGCGGGGGCCGAACAGGCGGAGCAGGGGGATCCTCAAGCCCGACATCATAGGCCCCGGAGTGAACATCCTCGCCGGCGTCCCCAAGATCGAGGACTTGGCGCTCGGGGCCGAGGAAGTGATGCCCAAGTTTGACATCAAGTCCGGCACCTCCATGGCCGCGCCGCACATCAGCGGGGTCGCCGCGCTGATCAAGAACGCGCACCCGACGTGGTCGCCGGCCGCCATCAAGTCGGCCATGATGACGACGGCCGATTACACCGACAACCTCCGGAAGCCGATAACCGACGTGGACGGCGCGCCGGCGACCTACTACGCCATCGGCGCCGGCTACGTGAACGCGCGGAAAGCCATCGACCCGGGGCTCGTGTACAACCTGTCGTCGCTGGACTACATCCCCTACCTCTGCGGGCTCGGGTACAAGGACCAGAAGGTGAACTCGATCATCCACCCGGGGCCGGCGGTGGAGTGCGCCAAGATGCCCAAGGTCGATCAGAAGGATCTCAACTACCCGTCCATCACGGCCGTCCTGGACATGGAGCCGTACGAGGTGAGCATCAACCGGTCGGCGACGAACGTCGGGGCGGCCACCTCGACGTACGCCGTGGAGGTGGACGTGCCGGCGACGCTGGCGGTGGAGGTGAACCCGGCGAAGCTGGAGTTCAGGGCGCTGAACGAGGTGCTGAACTACACGGTCACCGTCAAGACGGCCTCCGGCAAGGCGCCGGCCAGCACGATCGAGGGGCAGCTGAAGTGGGTGTCGGGGAAAAAGTACGTGGTGCGCAGCCCGATCCTCGTCTGTGCCGGCACCGGCGGC AAGAGCGCCGCCT CCATGGGGGCTGCACCGGCGTAGAGCACTGGTCGAGCGGAGCCTAAGAGATAGCAGCTTGATGATGATTACTAGATTGCCACGCGTGTTAACGTTTGATGGTGCTTTACTCTTCGCTCGGTAGGTTTAGGCTCATGTATGTGGAGGCTAGCGAATTAATCCTTTCCTCCGCGGAAGTGGGGTGACGGGTTTTTCTTGCTGTTTTTACCACTAGTGCACGCGGCTGATCTTGACCATTCATTGATTTTGTACTCCAGGGGACGAGATGTGATTTCATCCCCGGCCCCTTAATCATGATATATGTTCATTTATTCTTTTTTTCCTGTTTCTCAAATAGATGCAGACGTGACACTCCTCTCAAATAGATGCTGGTGTGT]
[-] EMBL AU163615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTGGGCGACGGCATGTGCACCACCGAGAGCGTACTGAGGGCGATGAATGTCACCGGTAAGATCATCATCTGCGATGCTGGTGGCGACGTGAGCGTCGCGAAGGCCAAGTTGGTGCTCCGCTCCGGCGCCGCCGGCATGATCGTCATCGCCCCTCAGGTGTACGGTTCGGTGATCGTCCCGAGGCCGCACGTCCTCCCGACGGTGCAGATGCCATTCATGATAGGGCAGAAGATCAAGGCTTACATCCGGAGCACGCCGAGCCCGACGGCGAACTTCATCTTCAAAGGGACAGTGTTCAAAGCGAA TCGCCGGTGGCCGCGCCCTTCTCGTCGCGGGGGCCGAACAGGCGGA CAGGGGGATCCTCAAGCCCGACATCATAGGCCCCGGAGTGAACATCCTCGCCGGCGTCCCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL C73131               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGGCACCNGCGGCAAAGAGCGCCGCCTCCCAT GGGGCTGCACCGGCGTAGAGCACTGGTCGAGCGGAGCCTAAGAGATAGCAGCTTGATGATGATTACTAGATTGCCACGCGTGTTAACGTTTGATGGTGCTTTACTCTTCGCTCGGTAGGTTTAGGCTCATGTATGTGGAGGCTAGCGAATTAATCCTTTCCTCCGCGGAAGTGGGGTGACGGGTTTTTCTTGCTGTTTTTACCACTAGTGCACGCGGCTGATCTTGACCATTCATTGATTTTGTACTCCAGGGGACGAGATGTGATTTCATCCCCGGCCCCTTAATCATGATATATGTTCATTTATT                                                                ]


>consensus_4703#0 GCCGCACTCAATGGACAATCGTAACCATGGGCGGTGCTCGTTGCCGCGGCTCGCCGTTGG CGCCGCCGTCCTCCTCCTCGCCGTCTCCCTAGCGGCCACGCCGGCGGCGAGCCATGCCGG GCACGATGACACCGGCTTGCACAGCAACTACCTCGTCATCGTGCGCAAGCCGTACGCGTA CGACACGAACCTGTACAAGAACGTGTCGAGCTGGCACGCGTCGCTGGTGGCGTCGGTGTG CGACATGGCGAAGGAGGCGCTGGAGAGGGACCCCTCCTCCGTGTCCCGGCTCATCTACTC CTACCGCAACGTCGTCAATGGCTTCGCCGCCCGCCTGACGCCGGAGGAGGTGGAGGAGAT GTCCAAGAACGACTGGTTCATCCGCGCCGACCCGGAGAAGACGTACCAGCTCCAGACCAC CCACACGCCGCAGCTGCTCGGCCTCATGGGCGGCGCCCGCCGCGGCGGCGTGTGGAACAC CAGCAACATGGGCGAGGGCATCATCATCGGGATCCTCGACGACGGCATCTACGCCGGGCA CCCGTCGTTCGACGGGGCGGGCATGAAGCCGCCGCCGGCCAAGTGGAGCGGCCGGTGCGA CTTCAACAAGACGGTGTGCAACAACAAGCTCATCGGAGCGCGCTCCTACTTCGAGTCGGC GAAGTGGAAGTGGAAAGGGCTGCGCGACCCGGTCCTGCCGATCAACGAGGGGCAGCACGG GACGCACACGTCCAGCACGGCGGCCGGCTCGTTCGTGCCCGGCGCCAACGTCTCCGGCTA CGCGGTCGGCACGGCGGGCGGCATGGCCCCCCGCGCGCACATCGCCTTCTACCAGGTGTG CTACGTGGAGAAGGGCTGCGACCGCGACGACATACTGGCGGCGGTGGACGACGCCCTCGA GGACGGCGTCGACATCCTGTCGCTGTCGCTCGGCGACGAGCAGGCCGGCGACTTCTCCGA CGACCCGGTCTCGCTCGGAGGCTACAGCGCTGCCATGCATGGCGTGCTGGTCAGCGCGGC CGGCGGCAACACCGGCCCGGGACCGAGCACCGTCGTCAACGAGGCGCCGTGGGTTATCAC CGTGGGGGCAGGCACCACCGACCGGCGGTTCGTCGCCACCGTGAAGCTTGGAAGCGGGGT TAGCCTCGACGGCGAGTCGCTCAGCGAGCCCAAGGACTTCGGAGCCGAGATGCGGCCGCT GGTGCACGACGTGGGCGACGGCATGTGCACCACCGAGAGCGTACTGAGGGCGATGAATGT CACCGGTAAGATCATCATCTGCGATGCTGGTGGCGACGTGAGCGTCGCGAAGGCCAAGTT GGTGCTCCGCTCCGGCGCCGCCGGCATGATCGTCATCGCCCCTCAGGTGTACGGTTCGGT GATCGTCCCGAGGCCGCACGTCCTCCCGACGGTGCAGATGCCATTCATGATAGGGCAGAA GATCAAGGCTTACATCCGGAGCACGCCGAGCCCGACGGCGAACTTCATCTTCAAAGGGAC AGTGTTCAAAGCGAAGTCGCCGGTGGCCGCGCCCTTCTCGTCGCGGGGGCCGAACAGGCG GAGCAGGGGGATCCTCAAGCCCGACATCATAGGCCCCGGAGTGAACATCCTCGCCGGCGT CCCCAAGATCGAGGACTTGGCGCTCGGGGCCGAGGAAGTGATGCCCAAGTTTGACATCAA GTCCGGCACCTCCATGGCCGCGCCGCACATCAGCGGGGTCGCCGCGCTGATCAAGAACGC GCACCCGACGTGGTCGCCGGCCGCCATCAAGTCGGCCATGATGACGACGGCCGATTACAC CGACAACCTCCGGAAGCCGATAACCGACGTGGACGGCGCGCCGGCGACCTACTACGCCAT CGGCGCCGGCTACGTGAACGCGCGGAAAGCCATCGACCCGGGGCTCGTGTACAACCTGTC GTCGCTGGACTACATCCCCTACCTCTGCGGGCTCGGGTACAAGGACCAGAAGGTGAACTC GATCATCCACCCGGGGCCGGCGGTGGAGTGCGCCAAGATGCCCAAGGTCGATCAGAAGGA TCTCAACTACCCGTCCATCACGGCCGTCCTGGACATGGAGCCGTACGAGGTGAGCATCAA CCGGTCGGCGACGAACGTCGGGGCGGCCACCTCGACGTACGCCGTGGAGGTGGACGTGCC GGCGACGCTGGCGGTGGAGGTGAACCCGGCGAAGCTGGAGTTCAGGGCGCTGAACGAGGT GCTGAACTACACGGTCACCGTCAAGACGGCCTCCGGCAAGGCGCCGGCCAGCACGATCGA GGGGCAGCTGAAGTGGGTGTCGGGGAAAAAGTACGTGGTGCGCAGCCCGATCCTCGTCTG TGCCGGCACCGGCGGCAAGAGCGCCGCCTCCATGGGGGCTGCACCGGCGTAGAGCACTGG TCGAGCGGAGCCTAAGAGATAGCAGCTTGATGATGATTACTAGATTGCCACGCGTGTTAA CGTTTGATGGTGCTTTACTCTTCGCTCGGTAGGTTTAGGCTCATGTATGTGGAGGCTAGC GAATTAATCCTTTCCTCCGCGGAAGTGGGGTGACGGGTTTTTCTTGCTGTTTTTACCACT AGTGCACGCGGCTGATCTTGACCATTCATTGATTTTGTACTCCAGGGGACGAGATGTGAT TTCATCCCCGGCCCCTTAATCATGATATATGTTCATTTATTCTTTTTTTCCTGTTTCTCA AATAGATGCAGACGTGACACTCCTCTCAAATAGATGCTGGTGTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)