cluster # 471

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 471 cluster # 471 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_471#0 length = 2027 sequences # 2
consensusID : consensus_471#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2027
fasta sequence
                              [CCGTCGTCTTCCTCCTCTACTCCTCGGACTTGGCCCTCCTCCTCCTCCTCGCGCCGCGCCAGCGCTGACGTAGCCGTAGGTCGCCGGGCGACGCGCCCACTAAGATATCGAGCAGTTCCGGAGCCTGCTCAGGGGGCTGGGTGCGGCCGCTCCGGCGATCGCCGGAGAAGAAGGGTGGTTGGAATCTGGTGAGTAGCCGGCCCTGATCCCGGTCGTCGTGGAAATCCTTCCTTCCTCTTCCGTGGTGGGCAGCAAGAGATTTTGGTGCTCCGTGATCTGGAGAGCTGTGCGCGGGACTGGGGTTAGGTGGCCCCCCCAAGGTTCGATCCGGCCCGATTTGGCGGAGGGATTCGAACGCGGCGTATTGGGATAGGAAGCCGCGCCGGTGGATTTGTTCGAGCAGATTTGGCTGCTGGGGGTTTGTGTGATGGGAGATCAGGCGGCGGCGGATGCGGCGGCGAGATGGTGACCGGGAGCTTTAGCAGGAGCACGTCGGCGCGGCTCACAGCGAGGGGCGGCGTCGGGAGCCCGCGGGTGTCGGCGGCGGCGGCCGCGCACCGCAAGTGGTGGTGGTGGGCGCCCTCGGGGCCGTCGTTCGAGTGCGCTGCCTTGGCCTTCTTCCTTTCCTCCGTCGCGCTCGTGCTCGCCTGCGCGCTGTATCTGTATCTCTTCCGGTACCAGGGCCGCGGCCATGCGGTCGCCGAGTTCGCCGGCGACAACCTAGAGTCCTGCGACGTGTTCGACGGAAGCTGGGTGCCGGACAGGAGGTACCCTTTGTACAATAGCTCCGATTGCCCGTTTGTGGAGAGGGGATTCAATTGCCTGGCAAATGGGAGGAAGGACACCGGCTACCTGAAATGGCGGTGGAAGCCAAGGGGATGCGACTTGCCGCGGTTCAGTGCCAGGGATGTGTTGGAACGGCTGAGGGGGAAGAGGGTTGTGTTTGTGGGGGACTCCATGAGCCGGACACAGTGGGAATCTTTCATCTGCATGCTCATGGCAGGGGTGGAGAATCCCAAGACTGTTTATGAGGTTAATGGCAATCAGATCTCAAAGACTATCCGGTTTTTAGGAGTGAGATTTGCGTCATTCAACCTGAATGTAGAGTTCTTCCGGTCGGTGTTTCTTGTACAACAGAGCCCTGCACCTCGCAGTAGCCCAAAAAGGGTCCGAGCAATTCTCAAGCTTGATAAGATGGATAATATCAGCCGGAAATGGGAGAATGCTGATGTGCTTATTTTCAACTCAGGGCATTGGTGGACTCCCAGCAAATTATTTGATATGGGCTGCTATTTTGAGGCTGGAGGTTTGCTTAAACTAGGTACATCCATTAATTCTGCTTTCAAAATGGCACTTGAAACATGGGCTTCATGGGTGAAGGAAAAGGTGGATTTAAAACGAACACATGTCTTTTTCCGCACGTATGAGCCATCTCATTGGAGTGGTTCAAATCAAAAGGTATGTGAAGTAACAGAATTTCCTACAGCTGAGGCCAAAGGAGATGACAGAAGTGAATTTGGAGATATACTCGCTGGGGTTGTGGTGAACATGAGCGTTCCTGCAACTATCTTGAATGTGACTTTGATGGGGGCCTTCAGAAGTGATGCTCATATCGGTATATGGAGTCATCCTTCAACCATACTTGATTGCAGTCATTGGTGCCTTCCTGGAGTCCCAGATGCTTGGAATGAACTAGTAATTTCCCACCTTTTGACAAATGGTTGGCGAAATTTGGCTGGCTGACTGACTGCTGACATTATACTTTGTTTTTCTTTTTCTTTTTCTTTTTTGTTTTTCTGCTGCTTCTGCTTCGTCTGCTATCAAGTAGCGGACCATGATTTTTTTTTCTTAGACAGCACTACAGCAGCATGTCTTCATCTTGGTTTTTCCTTTTCCTCAAGTGCTCCTTATACACGCCTCCGGGGTTACAGATTTTGTATCATTGTCTATTTTGCGTTTTAGACAGAACATCACAATCGGCAACCTGTATGTAAACACCAATTCATTTGCAAGTTTTGGAAAGTCAT]

[+] EMBL AK066678             [CCGTCGTCTTCCTCCTCTACTCCTCGGACTTGGCCCTCCTCCTCCTCCTCGCGCCGCGCCAGCGCTGACGTAGCCGTAGGTCGCCGGGCGACGCGCCCACTAAGATATCGAGCAGTTCCGGAGCCTGCTCAGGGGGCTGGGTGCGGCCGCTCCGGCGATCGCCGGAGAAGAAGGGTGGTTGGAATCTGGTGAGTAGCCGGCCCTGATCCCGGTCGTCGTGGAAATCCTTCCTTCCTCTTCCGTGGTGGGCAGCAAGAGATTTTGGTGCTCCGTGATCTGGAGAGCTGTGCGCGGGACTGGGGTTAGGTGGCCCCCCCAAGGTTCGATCCGGCCCGATTTGGCGGAGGGATTCGAACGCGGCGTATTGGGATAGGAAGCCGCGCCGGTGGATTTGTTCGAGCAGATTTGGCTGCTGGGGGTTTGTGTGATGGGAGATCAGGCGGCGGCGGATGCGGCGGCGAGATGGTGACCGGGAGCTTTAGCAGGAGCACGTCGGCGCGGCTCACAGCGAGGGGCGGCGTCGGGAGCCCGCGGGTGTCGGCGGCGGCGGCCGCGCACCGCAAGTGGTGGTGGTGGGCGCCCTCGGGGCCGTCGTTCGAGTGCGCTGCCTTGGCCTTCTTCCTTTCCTCCGTCGCGCTCGTGCTCGCCTGCGCGCTGTATCTGTATCTCTTCCGGTACCAGGGCCGCGGCCATGCGGTCGCCGAGTTCGCCGGCGACAACCTAGAGTCCTGCGACGTGTTCGACGGAAGCTGGGTGCCGGACAGGAGGTACCCTTTGTACAATAGCTCCGATTGCCCGTTTGTGGAGAGGGGATTCAATTGCCTGGCAAATGGGAGGAAGGACACCGGCTACCTGAAATGGCGGTGGAAGCCAAGGGGATGCGACTTGCCGCGGTTCAGTGCCAGGGATGTGTTGGAACGGCTGAGGGGGAAGAGGGTTGTGTTTGTGGGGGACTCCATGAGCCGGACACAGTGGGAATCTTTCATCTGCATGCTCATGGCAGGGGTGGAGAATCCCAAGACTGTTTATGAGGTTAATGGCAATCAGATCTCAAAGACTATCCGGTTTTTAGGAGTGAGATTTGCGTCATTCAACCTGAATGTAGAGTTCTTCCGGTCGGTGTTTCTTGTACAACAGAGCCCTGCACCTCGCAGTAGCCCAAAAAGGGTCCGAGCAATTCTCAAGCTTGATAAGATGGATAATATCAGCCGGAAATGGGAGAATGCTGATGTGCTTATTTTCAACTCAGGGCATTGGTGGACTCCCAGCAAATTATTTGATATGGGCTGCTATTTTGAGGCTGGAGGTTTGCTTAAACTAGGTACATCCATTAATTCTGCTTTCAAAATGGCACTTGAAACATGGGCTTCATGGGTGAAGGAAAAGGTGGATTTAAAACGAACACATGTCTTTTTCCGCACGTATGAGCCATCTCATTGGAGTGGTTCAAATCAAAAGGTATGTGAAGTAACAGAATTTCCTACAGCTGAGGCCAAAGGAGATGACAGAAGTGAATTTGGAGATATACTCGCTGGGGTTGTGGTGAACATGAGCGTTCCTGCAACTATCTTGAATGTGACTTTGATGGGGGCCTTCAGAAGTGATGCTCATATCGGTATATGGAGTCATCCTTCAACCATACTTGATTGCAGTCATTGGTGCCTTCCTGGAGTCCCAGATGCTTGGAATGAACTAGTAATTTCCCACCTTTTGACAAATGGTTGGCGAAATTTGGCTGGCTGACTGACTGCTGACATTATACTTTGTTTTTCTTTTTCTTTTTCTTTTTTGTTTTTCTGCTGCTTCTGCTTCGTCTGCTATCAAGTAGCGGACCATGATTTTTTTTTCTTAGACAGCACTACAGCAGCATGTCTTCATCTTGGTTTTTCCTTTTCCTCAAGTGCTCCTTATACACGCCTCCGGGGTTACAGATTTTGTATCATTGTCTATTTTGCGTTTTAGACAGAACATCACAATCGGCAACCTGTATGTAAACACCAATTCATTTGCAAGTTTTGGAAAGTCAT]
[+] EMBL AK058783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACATTATACTTTGTTTTTCTTTTTCTTTTTCTTTTTTGTTTTTCTGCTGCTTCTGCTTCGTCTGCTATCAAGTAGCGGACCATGATTTTTTTTTCTTAGACAGCACTACAGCAGCATGTCTTCATCTTGGTTTTTCCTTTTCCTCAAGTGCTCCTTATACACGCCTCCGGGGTTACAGATTTTGTATCATTGTCTATTTTGCGTTTTAGACAGAACATCACAATCGGCAACCTGTATGTAAACACCAATTCATTTGCAAGTTTTGGAAAGTCA ]




>consensus_471#0
CCGTCGTCTTCCTCCTCTACTCCTCGGACTTGGCCCTCCTCCTCCTCCTCGCGCCGCGCC
AGCGCTGACGTAGCCGTAGGTCGCCGGGCGACGCGCCCACTAAGATATCGAGCAGTTCCG
GAGCCTGCTCAGGGGGCTGGGTGCGGCCGCTCCGGCGATCGCCGGAGAAGAAGGGTGGTT
GGAATCTGGTGAGTAGCCGGCCCTGATCCCGGTCGTCGTGGAAATCCTTCCTTCCTCTTC
CGTGGTGGGCAGCAAGAGATTTTGGTGCTCCGTGATCTGGAGAGCTGTGCGCGGGACTGG
GGTTAGGTGGCCCCCCCAAGGTTCGATCCGGCCCGATTTGGCGGAGGGATTCGAACGCGG
CGTATTGGGATAGGAAGCCGCGCCGGTGGATTTGTTCGAGCAGATTTGGCTGCTGGGGGT
TTGTGTGATGGGAGATCAGGCGGCGGCGGATGCGGCGGCGAGATGGTGACCGGGAGCTTT
AGCAGGAGCACGTCGGCGCGGCTCACAGCGAGGGGCGGCGTCGGGAGCCCGCGGGTGTCG
GCGGCGGCGGCCGCGCACCGCAAGTGGTGGTGGTGGGCGCCCTCGGGGCCGTCGTTCGAG
TGCGCTGCCTTGGCCTTCTTCCTTTCCTCCGTCGCGCTCGTGCTCGCCTGCGCGCTGTAT
CTGTATCTCTTCCGGTACCAGGGCCGCGGCCATGCGGTCGCCGAGTTCGCCGGCGACAAC
CTAGAGTCCTGCGACGTGTTCGACGGAAGCTGGGTGCCGGACAGGAGGTACCCTTTGTAC
AATAGCTCCGATTGCCCGTTTGTGGAGAGGGGATTCAATTGCCTGGCAAATGGGAGGAAG
GACACCGGCTACCTGAAATGGCGGTGGAAGCCAAGGGGATGCGACTTGCCGCGGTTCAGT
GCCAGGGATGTGTTGGAACGGCTGAGGGGGAAGAGGGTTGTGTTTGTGGGGGACTCCATG
AGCCGGACACAGTGGGAATCTTTCATCTGCATGCTCATGGCAGGGGTGGAGAATCCCAAG
ACTGTTTATGAGGTTAATGGCAATCAGATCTCAAAGACTATCCGGTTTTTAGGAGTGAGA
TTTGCGTCATTCAACCTGAATGTAGAGTTCTTCCGGTCGGTGTTTCTTGTACAACAGAGC
CCTGCACCTCGCAGTAGCCCAAAAAGGGTCCGAGCAATTCTCAAGCTTGATAAGATGGAT
AATATCAGCCGGAAATGGGAGAATGCTGATGTGCTTATTTTCAACTCAGGGCATTGGTGG
ACTCCCAGCAAATTATTTGATATGGGCTGCTATTTTGAGGCTGGAGGTTTGCTTAAACTA
GGTACATCCATTAATTCTGCTTTCAAAATGGCACTTGAAACATGGGCTTCATGGGTGAAG
GAAAAGGTGGATTTAAAACGAACACATGTCTTTTTCCGCACGTATGAGCCATCTCATTGG
AGTGGTTCAAATCAAAAGGTATGTGAAGTAACAGAATTTCCTACAGCTGAGGCCAAAGGA
GATGACAGAAGTGAATTTGGAGATATACTCGCTGGGGTTGTGGTGAACATGAGCGTTCCT
GCAACTATCTTGAATGTGACTTTGATGGGGGCCTTCAGAAGTGATGCTCATATCGGTATA
TGGAGTCATCCTTCAACCATACTTGATTGCAGTCATTGGTGCCTTCCTGGAGTCCCAGAT
GCTTGGAATGAACTAGTAATTTCCCACCTTTTGACAAATGGTTGGCGAAATTTGGCTGGC
TGACTGACTGCTGACATTATACTTTGTTTTTCTTTTTCTTTTTCTTTTTTGTTTTTCTGC
TGCTTCTGCTTCGTCTGCTATCAAGTAGCGGACCATGATTTTTTTTTCTTAGACAGCACT
ACAGCAGCATGTCTTCATCTTGGTTTTTCCTTTTCCTCAAGTGCTCCTTATACACGCCTC
CGGGGTTACAGATTTTGTATCATTGTCTATTTTGCGTTTTAGACAGAACATCACAATCGG
CAACCTGTATGTAAACACCAATTCATTTGCAAGTTTTGGAAAGTCAT
clustalw multiple alignements is not computed in this case