cluster # 4717

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Oryza sativa
cluster # 4717 cluster # 4717 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4717#0 length = 622 sequences # 3

consensusID : consensus_4717#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 622
fasta sequence

                              [TGGCGAAGGATGTAACAGCAAGTTTCGGCTATGATTATATGTTGAGACAGTGTCGTCTGAGGGGGAAGATTGATACCAATGGCGTTGTTTCTGCTCTTTTGGAGGAGCGGTTGACCCTCGGCGTGAATTTCGTTCTTTCTGCAGAGCTTGATCACTG-GAAGAAAGATTACAAATTTGGGTTTGGTATGGTTCTTGGGAGAGTGAGGCAGTGTCGGCGGTTTCTTCGGANACGCATGTNCGNANTATAGCAGTTGGCATTTGTCGACAGAAACTAAGACAATTTTANTTTTGCCATTCATTTGTTTTTCAGTTCTTCATGGGTTTGCTATTGTCTACCGCACCTTTTTTNATTGTACTGGCCCCCNTACTTAAAAAAGGCCCTAATTTNGGANAAAAATNCTTATGNANATNGGTGTTTGNATTGGCNATTNGCCAACCCNAAATATNATTCAAACCNTGTTGCCCCCCTTTTNATGTNCCAATAACCCCTTTCCCCCGTTTTTTGGTGCCGGTACCGTTANTTTGTTCTGGTTCCAAACCNAAATAACCCCCCTATTNTNGACCAGATTGAAAAAATTNCCCGTNCCGGTGNTCCCCCANATTTCCCCCCCCCTNGGTTCCC]

[+] EMBL CA923293             [TGGCGAAGGATGTAACAGCAAGTTTCGGCTATGATTATATGTTGAGACAGTGTCGTCTGAGGGGGAAGATTGATACCAATGGCGTTGTTTCTGCTCTTTTGGAGGAGCGGTTGACCCTCGGCGTGAATTTCGTTCTTTCTGCAGAGCTTGATCACTG GAAGAAAGATTACAAATTTGGGTTTGGTATGGTTCTT GGAGAGTGAGGCAGTGTCGGCGGTTTCTTCGG                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA882880             [TGGCGAAGGATGTAACAGCAAGTTTCGGCTATGATTATATGTTGAGACAGTGTCGTCTGAGGGGGAAGATTGATACCAATGGCGTTGTTTCTGCTCTTTTGGAGGAGCGGTTGACCCTCGGCGTGAATTTCGTTCTTTCTGCAGAGCTTGATCACTG GAAGAAAGATTACAAATTTGGGTTTGGTATGGTTCTTGGa                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BE228765             [                                                                                                                                      CTNTCTGCAGAGCTTGATCACTGNGNAGAAAGATTACAAATTTGGGTTTGGTATGGTTCTTGGGAGAGTGAGGCANTGTCCGCGGTTTCTTCGGANACGCATGTNCGNANTATAGCAGTTGGCATTTGTCGACAGAAACTAAGACAATTTTANTTTTGCCATTCATTTGTTTTTCAGTTCTTCATGGGTTTGCTATTGTCTACCGCACCTTTTTTNATTGTACTGGCCCCCNTACTTAAAAAAGGCCCTAATTTNGGANAAAAATNCTTATGNANATNGGTGTTTGNATTGGCNATTNGCCAACCCNAAATATNATTCAAACCNTGTTGCCCCCCTTTTNATGTNCCAATAACCCCTTTCCCCCGTTTTTTGGTGCCGGTACCGTTANTTTGTTCTGGTTCCAAACCNAAATAACCCCCCTATTNTNGACCAGATTGAAAAAATTNCCCGTNCCGGTGNTCCCCCANATTTCCCCCCCCCTNGGTTCCC]




>consensus_4717#0
TGGCGAAGGATGTAACAGCAAGTTTCGGCTATGATTATATGTTGAGACAGTGTCGTCTGA
GGGGGAAGATTGATACCAATGGCGTTGTTTCTGCTCTTTTGGAGGAGCGGTTGACCCTCG
GCGTGAATTTCGTTCTTTCTGCAGAGCTTGATCACTGGAAGAAAGATTACAAATTTGGGT
TTGGTATGGTTCTTGGGAGAGTGAGGCAGTGTCGGCGGTTTCTTCGGANACGCATGTNCG
NANTATAGCAGTTGGCATTTGTCGACAGAAACTAAGACAATTTTANTTTTGCCATTCATT
TGTTTTTCAGTTCTTCATGGGTTTGCTATTGTCTACCGCACCTTTTTTNATTGTACTGGC
CCCCNTACTTAAAAAAGGCCCTAATTTNGGANAAAAATNCTTATGNANATNGGTGTTTGN
ATTGGCNATTNGCCAACCCNAAATATNATTCAAACCNTGTTGCCCCCCTTTTNATGTNCC
AATAACCCCTTTCCCCCGTTTTTTGGTGCCGGTACCGTTANTTTGTTCTGGTTCCAAACC
NAAATAACCCCCCTATTNTNGACCAGATTGAAAAAATTNCCCGTNCCGGTGNTCCCCCAN
ATTTCCCCCCCCCTNGGTTCCC

clustalw multiple alignements is not computed in this case