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Oryza sativa
cluster # 4722 cluster # 4722       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4722#0 length = 1545 sequences # 3  

consensusID : consensus_4722#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1545
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGACTGCGCTGCTACACGCTACGGGATAAGCCAAGCTTGCTTGCTTTCGTAGTCGCTTTGCTCGATCGCTCCTCTCGATCCCATCCTAGATTCCACTCGGTTCTGCTTCTGCTCCTTCGATGGGTTCCCGCGACGGATGGCGGCTACTCCTCCTCCTGCTCGGCTTCCTGCTCGTGGCGCCGACTTGCCGCGCTCGGGAGGCGCAGCCGCTGCCGGTACTGGAGGAAGAGGAGGTGGTGGCGGACGCGGCAGGAGGGCGTGGTGGCGCGGGCGCTGCTGCCGGCGGAGGAAACAGGCGCGCGCCGGTGCGGCACGAGCTGTCGCTGGACTTCTACGCCAAGACGTGCCCGGCCGTCGACCAGATCGTCGGCAACGTCACCGCGCCGCGGTTCCGCGACAACCCCGCCGCCGGCCCCGCCGTGCTCCGCCTCTTCTACCACGACTGCTTCGTCGAAGGGTGCGACGCGTCCATACTGATCGCGCCGACGGCCAACAACGGCGGCGGGGCGCCGAGGGTGGAGAGGGACATGGAGGAGAACCGGAACCTGCCGCAGGAGGCGTTCGACACGGTGGAGATGGCCAAGGCCGCCGTGGAGAAGGCGTGCCCCGGCGTCGTCACCTGCGCCGACGTCCTCGCGCTCGCCGCCCGGGACTTCGTCCACCTGGCAGGTGGGCCCTACTACGCGGTGAAGAAGGGTCGGAAGGACAGCAGGGTGTCCCTGGCGGGCAAGGTGCGGGGCAGCCTCCCGCGCGCCAACTCCACCGTGGACGAGCTCCTCCGCGTGTTCGCCGCCAAGGGCCTCGGCGCCGGCGACCTCGTGGCGCTCTCGGGCGCGCACACCGTCGGGTTCGCGCACTGCGCCCACTTCCTGGGCCGCCTCTACGACTTCGGCGGGACGCGGCAGCCGGACCCGGTGATGGACGCGCGGCTGGTGAAGGCGCTGCGCATGTCGTGCCCCTACACCGGCGGCAGCGCCCGCGTGGTGGTGCCCTTCGACGTGAGCACCCCGTTCCAGTTCGACCACGCCTACTACGCCAACCTGCAGGCGAGGCTGGGACTCCTCGGCTCCGACCAGGCGCTGTTCCTCGACGCGCGCACCAGGCCGCTCGTCGAGGGGCTCGCCGCCGACAGGGAGCGGTTCTTCCAGGCGTTCGCGGCCAGCATGGACAGGATGGGCTCCGTCCGGGTCAAGAAGGGCAGGAAGGGGGAGGTCAGGCGAGTCTGCAGCCAGCACCTGTCCTGAACGTGTACTGGTCCAAACTCGGACGATCACACTGTCTCGATCACTCGATCACACTTGGCGTTACAGGAGTTATCTTTTGCTGTAAACTGCCACATTTCGGAAAGTATTAGTAGTTCCGTTCTTTTTTTTTTCTTTTGTTGGGTGCACTAGTGCTAGGTTGTGCAGGGATTGTTAATTTTGCATGGTCACTCGCATCCGCAGTGTGTGAGGCTTCCTATTTGTCTGATTGGATTGGATTGGACTGGATTGCAGAAAAAAAAAAAAAAAAAGGCCACAT]

[+] EMBL AK109381             [TTCCTCGAGCACTGTTGGCCTACTGGACTGCGCTGCTACACGCTACGGGATAAGCCAAGCTTGCTTGCTTTCGTAGTCGCTTTGCTCGATCGCTCCTCTCGATCCCATCCTAGATTCCACTCGGTTCTGCTTCTGCTCCTTCGATGGGTTCCCGCGACGGATGGCGGCTACTCCTCCTCCTGCTCGGCTTCCTGCTCGTGGCGCCGACTTGCCGCGCTCGGGAGGCGCAGCCGCTGCCGGTACTGGAGGAAGAGGAGGTGGTGGCGGACGCGGCAGGAGGGCGTGGTGGCGCGGGCGCTGCTGCCGGCGGAGGAAACAGGCGCGCGCCGGTGCGGCACGAGCTGTCGCTGGACTTCTACGCCAAGACGTGCCCGGCCGTCGACCAGATCGTCGGCAACGTCACCGCGCCGCGGTTCCGCGACAACCCCGCCGCCGGCCCCGCCGTGCTCCGCCTCTTCTACCACGACTGCTTCGTCGAAGGGTGCGACGCGTCCATACTGATCGCGCCGACGGCCAACAACGGCGGCGGGGCGCCGAGGGTGGAGAGGGACATGGAGGAGAACCGGAACCTGCCGCAGGAGGCGTTCGACACGGTGGAGATGGCCAAGGCCGCCGTGGAGAAGGCGTGCCCCGGCGTCGTCACCTGCGCCGACGTCCTCGCGCTCGCCGCCCGGGACTTCGTCCACCTGGCAGGTGGGCCCTACTACGCGGTGAAGAAGGGTCGGAAGGACAGCAGGGTGTCCCTGGCGGGCAAGGTGCGGGGCAGCCTCCCGCGCGCCAACTCCACCGTGGACGAGCTCCTCCGCGTGTTCGCCGCCAAGGGCCTCGGCGCCGGCGACCTCGTGGCGCTCTCGGGCGCGCACACCGTCGGGTTCGCGCACTGCGCCCACTTCCTGGGCCGCCTCTACGACTTCGGCGGGACGCGGCAGCCGGACCCGGTGATGGACGCGCGGCTGGTGAAGGCGCTGCGCATGTCGTGCCCCTACACCGGCGGCAGCGCCCGCGTGGTGGTGCCCTTCGACGTGAGCACCCCGTTCCAGTTCGACCACGCCTACTACGCCAACCTGCAGGCGAGGCTGGGACTCCTCGGCTCCGACCAGGCGCTGTTCCTCGACGCGCGCACCAGGCCGCTCGTCGAGGGGCTCGCCGCCGACAGGGAGCGGTTCTTCCAGGCGTTCGCGGCCAGCATGGACAGGATGGGCTCCGTCCGGGTCAAGAAGGGCAGGAAGGGGGAGGTCAGGCGAGTCTGCAGCCAGCACCTGTCCTGAACGTGTACTGGTCCAAACTCGGACGATCACACTGTCTCGATCACTCGATCACACTTGGCGTTACAGGAGTTATCTTTTGCTGTAAACTGCCACATTTCGGAAAGTATTAGTAGTTCCGTTCTTTTTTTTTTCTTTTGTTGGGTGCACTAGTGCTAGGTTGTGCAGGGATTGTTAATTTTGCATGGTCACTCGCATCCGCAGTGTGTGAGGCTTCCTATTTGTCTGATTGGATTGGATTGGACTGGATTGCAGAAAAAAAAAAAAAAAAAGGCCACAT]
[-] EMBL CB680371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCTAGTGGCGCTCTCGGGCGCGCACACCGTCGGGTTCGCGCACTGCGCCCACTTCCTGGGCCGCCTCTACGACTTCGGCGGGACGCGGCAGCCGGACCCGGTGATGGACGCGCGGCTGGTGAAGGCGCTGCGCATGTCGTGCCCCTACACCGGCGGCAGCGCCCGCGTGGTGGTGCCCTTCGACGTGAGCACCCCGTTCCAGTTCGACCACGCCTACTACGCCAACCTGCAGGCGAGGCTGGGACTCCTCGGCTCCGACCAGGCGCTGTTCCTCGACGCGCGCACCAGGCCGCTCGTCGAGGGGCTCGCCGCCGACAGGGAGCGGTTCTTCCAGGCGTTCGCGGCCAGCATGGACAGGATGGGCTCCGTCCGGGTCAAGAAGGGCAGGAAGGGGGAGGTCAGGCGAGTCTGCAGCCAGCACCTGTCCTGAACGTGTACTGGTCCAAACTCGGACGATCACACTGTCTCGATCACTCGATCACACTTGGCGTTACAGGAGTTATCTTTTGCTGTAAACTGCCACATTTCGGAAAGTATTAGTAG                                                                                                                                                                    ]
[+] EMBL CF329240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTGCAGGCGAGGCTGGGACTCCTCGGCTCCGACCAGGCGCTGTTCCTCGACGCGCGCACCAGGCCGCTCGTCGAGGGGCTCGCCGCCGACAGGGAGCGGTTCTTCCAGGCGTTCGCGGCCAGCATGGACAGGATGGGCTCCGTCCGGGTCAAGAAGGGCAGGAAGGGGGAGGTCAGGCGAGTCTGCAGCCAGCACCTGTCCTGAACGTGTACTGGTCCAAACTCGGACGATCACACTGTCTCGATCACTCGATCACACTTGGCGTTACAGGAGTTATCTTTTGCTGTAAACTGCCACATTTCGGAAAGTATTAGTAGTTCCGTTCTTTTTTTTTTaaaaaaa                                                                                                                                           ]


>consensus_4722#0 TTCCTCGAGCACTGTTGGCCTACTGGACTGCGCTGCTACACGCTACGGGATAAGCCAAGC TTGCTTGCTTTCGTAGTCGCTTTGCTCGATCGCTCCTCTCGATCCCATCCTAGATTCCAC TCGGTTCTGCTTCTGCTCCTTCGATGGGTTCCCGCGACGGATGGCGGCTACTCCTCCTCC TGCTCGGCTTCCTGCTCGTGGCGCCGACTTGCCGCGCTCGGGAGGCGCAGCCGCTGCCGG TACTGGAGGAAGAGGAGGTGGTGGCGGACGCGGCAGGAGGGCGTGGTGGCGCGGGCGCTG CTGCCGGCGGAGGAAACAGGCGCGCGCCGGTGCGGCACGAGCTGTCGCTGGACTTCTACG CCAAGACGTGCCCGGCCGTCGACCAGATCGTCGGCAACGTCACCGCGCCGCGGTTCCGCG ACAACCCCGCCGCCGGCCCCGCCGTGCTCCGCCTCTTCTACCACGACTGCTTCGTCGAAG GGTGCGACGCGTCCATACTGATCGCGCCGACGGCCAACAACGGCGGCGGGGCGCCGAGGG TGGAGAGGGACATGGAGGAGAACCGGAACCTGCCGCAGGAGGCGTTCGACACGGTGGAGA TGGCCAAGGCCGCCGTGGAGAAGGCGTGCCCCGGCGTCGTCACCTGCGCCGACGTCCTCG CGCTCGCCGCCCGGGACTTCGTCCACCTGGCAGGTGGGCCCTACTACGCGGTGAAGAAGG GTCGGAAGGACAGCAGGGTGTCCCTGGCGGGCAAGGTGCGGGGCAGCCTCCCGCGCGCCA ACTCCACCGTGGACGAGCTCCTCCGCGTGTTCGCCGCCAAGGGCCTCGGCGCCGGCGACC TCGTGGCGCTCTCGGGCGCGCACACCGTCGGGTTCGCGCACTGCGCCCACTTCCTGGGCC GCCTCTACGACTTCGGCGGGACGCGGCAGCCGGACCCGGTGATGGACGCGCGGCTGGTGA AGGCGCTGCGCATGTCGTGCCCCTACACCGGCGGCAGCGCCCGCGTGGTGGTGCCCTTCG ACGTGAGCACCCCGTTCCAGTTCGACCACGCCTACTACGCCAACCTGCAGGCGAGGCTGG GACTCCTCGGCTCCGACCAGGCGCTGTTCCTCGACGCGCGCACCAGGCCGCTCGTCGAGG GGCTCGCCGCCGACAGGGAGCGGTTCTTCCAGGCGTTCGCGGCCAGCATGGACAGGATGG GCTCCGTCCGGGTCAAGAAGGGCAGGAAGGGGGAGGTCAGGCGAGTCTGCAGCCAGCACC TGTCCTGAACGTGTACTGGTCCAAACTCGGACGATCACACTGTCTCGATCACTCGATCAC ACTTGGCGTTACAGGAGTTATCTTTTGCTGTAAACTGCCACATTTCGGAAAGTATTAGTA GTTCCGTTCTTTTTTTTTTCTTTTGTTGGGTGCACTAGTGCTAGGTTGTGCAGGGATTGT TAATTTTGCATGGTCACTCGCATCCGCAGTGTGTGAGGCTTCCTATTTGTCTGATTGGAT TGGATTGGACTGGATTGCAGAAAAAAAAAAAAAAAAAGGCCACAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)