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Oryza sativa
cluster # 4731 cluster # 4731       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4731#0 length = 1605 sequences # 1  
consensus_4731#1 length = 1324 sequences # 1  
consensus_4731#2 length = 439 sequences # 1  

consensusID : consensus_4731#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1605
fasta sequence
                              [TTTCCTCTCTCTTCTCTCTCCCCCTCTCCTGGAGGAGAGAGAGGAGAAGAGGAGGGGGGGCCGCGCCAAGAGCCACGCGCGCTACAGTCTCCTTCCCACCCGCGACCGCGAGCAATGGAGATGGCCAGTGGAGGAGGCGCCGCCGCCGCCGCCGGCGGCGGAGTAGGCGGCAGCGGCGGCGGTGGTGGTGGAGGGGACGAGCACCGCCAGCTGCACGGTCTCAAGTTCGGCAAGAAGATCTACTTCGAGGACGCCGCCGCGGCAGCAGGCGGCGGCGGCACTGGCAGTGGCAGTGGCAGCGCGAGCGCCGCGCCGCCGTCCTCGTCTTCCAAGGCGGCGGGTGGTGGACGCGGCGGAGGGGGCAAGAACAAGGGGAAGGGCGTGGCCGCGGCGGCGCCACCGCCGCCGCCGCCGCCGCCGCGGTGCCAGGTGGAGGGGTGCGGCGCGGATCTGAGCGGGATCAAGAACTACTACTGCCGCCACAAGGTGTGCTTCATGCATTCCAAGGCTCCCCGCGTCGTCGTCGCCGGCCTCGAGCAGCGCTTCTGCCAGCAGTGCAGCAGGTTCCACCTGCTGCCTGAATTTGACCAAGGAAAACGCAGCTGCCGCAGACGCCTTGCAGGTCATAATGAGCGCCGGAGGAGGCCGCAAACCCCTTTGGCATCACGCTACGGTCGACTAGCTGCATCTGTTGGTGAGCATCGCAGGTTCAGAAGCTTTACGTTGGATTTCTCCTACCCAAGGGTTCCAAGCAGCGTAAGGAATGCATGGCCAGCAATTCAACCAGGCGATCGGATCTCCGGTGGTATCCAGTGGCACAGGAACGTAGCTCCTCATGGTCACTCTAGTGCAGTGGCGGGATATGGTGCCAACACATACAGCGGCCAAGGTAGCTCTTCTTCAGGGCCACCGGTGTTCGCTGGCCCAAATCTCCCTCCAGGTGGATGTCTCGCAGGGGTCGGTGCCGCCACCGACTCGAGCTGTGCTCTCTCTCTTCTGTCAACCCAGCCATGGGATACTACTACCCACAGTGCCGCTGCCAGCCACAACCAGGCTGCAGCCATGTCCACTACCACCAGCTTTGATGGCAATCCTGTGGCACCCTCCGCCATGGCGGGTAGCTACATGGCACCAAGCCCCTGGACAGGTTCTCGGGGCCATGAGGGTGGTGGTCGGAGCGTGGCGCACCAGCTACCACATGAAGTCTCACTTGATGAGGTGCACCCTGGTCCTAGCCATCATGCCCACTTCTCCGGTGAGCTTGAGCTTGCTCTGCAGGGGAACGGTCCAGCCCCAGCACCACGCATCGATCCTGGGTCCGGCAGCACCTTCGACCAAACCAGCAACACGATGGATTGGTCTCTGTAGAGGCTGTTCCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAACTGAAGAACCTCATGCTGCCTGCCCTTATTTTGTGTTCAAATTTTCCTTTCCAGTATGGAAAGGAAATTCTAAGGTGACTGGCGATTAATCTCCCTGTGATGAATAATAATGCGCGCCCTTGAACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTTAAGTATCAGTG]

[+] EMBL AK107191             [TTTCCTCTCTCTTCTCTCTCCCCCTCTCCTGGAGGAGAGAGAGGAGAAGAGGAGGGGGGGCCGCGCCAAGAGCCACGCGCGCTACAGTCTCCTTCCCACCCGCGACCGCGAGCAATGGAGATGGCCAGTGGAGGAGGCGCCGCCGCCGCCGCCGGCGGCGGAGTAGGCGGCAGCGGCGGCGGTGGTGGTGGAGGGGACGAGCACCGCCAGCTGCACGGTCTCAAGTTCGGCAAGAAGATCTACTTCGAGGACGCCGCCGCGGCAGCAGGCGGCGGCGGCACTGGCAGTGGCAGTGGCAGCGCGAGCGCCGCGCCGCCGTCCTCGTCTTCCAAGGCGGCGGGTGGTGGACGCGGCGGAGGGGGCAAGAACAAGGGGAAGGGCGTGGCCGCGGCGGCGCCACCGCCGCCGCCGCCGCCGCCGCGGTGCCAGGTGGAGGGGTGCGGCGCGGATCTGAGCGGGATCAAGAACTACTACTGCCGCCACAAGGTGTGCTTCATGCATTCCAAGGCTCCCCGCGTCGTCGTCGCCGGCCTCGAGCAGCGCTTCTGCCAGCAGTGCAGCAGGTTCCACCTGCTGCCTGAATTTGACCAAGGAAAACGCAGCTGCCGCAGACGCCTTGCAGGTCATAATGAGCGCCGGAGGAGGCCGCAAACCCCTTTGGCATCACGCTACGGTCGACTAGCTGCATCTGTTGGTGAGCATCGCAGGTTCAGAAGCTTTACGTTGGATTTCTCCTACCCAAGGGTTCCAAGCAGCGTAAGGAATGCATGGCCAGCAATTCAACCAGGCGATCGGATCTCCGGTGGTATCCAGTGGCACAGGAACGTAGCTCCTCATGGTCACTCTAGTGCAGTGGCGGGATATGGTGCCAACACATACAGCGGCCAAGGTAGCTCTTCTTCAGGGCCACCGGTGTTCGCTGGCCCAAATCTCCCTCCAGGTGGATGTCTCGCAGGGGTCGGTGCCGCCACCGACTCGAGCTGTGCTCTCTCTCTTCTGTCAACCCAGCCATGGGATACTACTACCCACAGTGCCGCTGCCAGCCACAACCAGGCTGCAGCCATGTCCACTACCACCAGCTTTGATGGCAATCCTGTGGCACCCTCCGCCATGGCGGGTAGCTACATGGCACCAAGCCCCTGGACAGGTTCTCGGGGCCATGAGGGTGGTGGTCGGAGCGTGGCGCACCAGCTACCACATGAAGTCTCACTTGATGAGGTGCACCCTGGTCCTAGCCATCATGCCCACTTCTCCGGTGAGCTTGAGCTTGCTCTGCAGGGGAACGGTCCAGCCCCAGCACCACGCATCGATCCTGGGTCCGGCAGCACCTTCGACCAAACCAGCAACACGATGGATTGGTCTCTGTAGAGGCTGTTCCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAACTGAAGAACCTCATGCTGCCTGCCCTTATTTTGTGTTCAAATTTTCCTTTCCAGTATGGAAAGGAAATTCTAAGGTGACTGGCGATTAATCTCCCTGTGATGAATAATAATGCGCGCCCTTGAACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTTAAGTATCAGTG]


>consensus_4731#0 TTTCCTCTCTCTTCTCTCTCCCCCTCTCCTGGAGGAGAGAGAGGAGAAGAGGAGGGGGGG CCGCGCCAAGAGCCACGCGCGCTACAGTCTCCTTCCCACCCGCGACCGCGAGCAATGGAG ATGGCCAGTGGAGGAGGCGCCGCCGCCGCCGCCGGCGGCGGAGTAGGCGGCAGCGGCGGC GGTGGTGGTGGAGGGGACGAGCACCGCCAGCTGCACGGTCTCAAGTTCGGCAAGAAGATC TACTTCGAGGACGCCGCCGCGGCAGCAGGCGGCGGCGGCACTGGCAGTGGCAGTGGCAGC GCGAGCGCCGCGCCGCCGTCCTCGTCTTCCAAGGCGGCGGGTGGTGGACGCGGCGGAGGG GGCAAGAACAAGGGGAAGGGCGTGGCCGCGGCGGCGCCACCGCCGCCGCCGCCGCCGCCG CGGTGCCAGGTGGAGGGGTGCGGCGCGGATCTGAGCGGGATCAAGAACTACTACTGCCGC CACAAGGTGTGCTTCATGCATTCCAAGGCTCCCCGCGTCGTCGTCGCCGGCCTCGAGCAG CGCTTCTGCCAGCAGTGCAGCAGGTTCCACCTGCTGCCTGAATTTGACCAAGGAAAACGC AGCTGCCGCAGACGCCTTGCAGGTCATAATGAGCGCCGGAGGAGGCCGCAAACCCCTTTG GCATCACGCTACGGTCGACTAGCTGCATCTGTTGGTGAGCATCGCAGGTTCAGAAGCTTT ACGTTGGATTTCTCCTACCCAAGGGTTCCAAGCAGCGTAAGGAATGCATGGCCAGCAATT CAACCAGGCGATCGGATCTCCGGTGGTATCCAGTGGCACAGGAACGTAGCTCCTCATGGT CACTCTAGTGCAGTGGCGGGATATGGTGCCAACACATACAGCGGCCAAGGTAGCTCTTCT TCAGGGCCACCGGTGTTCGCTGGCCCAAATCTCCCTCCAGGTGGATGTCTCGCAGGGGTC GGTGCCGCCACCGACTCGAGCTGTGCTCTCTCTCTTCTGTCAACCCAGCCATGGGATACT ACTACCCACAGTGCCGCTGCCAGCCACAACCAGGCTGCAGCCATGTCCACTACCACCAGC TTTGATGGCAATCCTGTGGCACCCTCCGCCATGGCGGGTAGCTACATGGCACCAAGCCCC TGGACAGGTTCTCGGGGCCATGAGGGTGGTGGTCGGAGCGTGGCGCACCAGCTACCACAT GAAGTCTCACTTGATGAGGTGCACCCTGGTCCTAGCCATCATGCCCACTTCTCCGGTGAG CTTGAGCTTGCTCTGCAGGGGAACGGTCCAGCCCCAGCACCACGCATCGATCCTGGGTCC GGCAGCACCTTCGACCAAACCAGCAACACGATGGATTGGTCTCTGTAGAGGCTGTTCCAG CTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAACTGAAGAACCTCATGCTGCCT GCCCTTATTTTGTGTTCAAATTTTCCTTTCCAGTATGGAAAGGAAATTCTAAGGTGACTG GCGATTAATCTCCCTGTGATGAATAATAATGCGCGCCCTTGAACTCAATTAATTGCTGTG CCGCATCCATCTATGTAACTCTCCATGAATTTTTAAGTATCAGTG



consensusID : consensus_4731#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1324
fasta sequence
                              [AGCGGCAATAAAAAGAAGAGAGAGAGAGAGAGAGAGAGAGGCTAGGCAGCTAGCAGGAGGAGGAAGGGACCGACCACCGCCTGCCGCAATGGCGACCGGCGGCAGCGGCGGCGGCGGCGGAGGTGGAGGTGGTGGTGACGATGTCCACGGCCGCCACAAGGTGTGCTACATGCACGCCAAGGAGCCCATCGTCGTCGTCGCCGGCCTCGAGCAGCGCTTCTGCCAACAGTGCAGCAGGTTCCACCAATTACCTGAATTTGATCAAGAAAAAAAAAGCTGCCGCAGACGCCTTGCAGGTCACAATGAACGCCGGAGGAAGCCGACACCTGGACCTCTTTCTTCTCGCTATGGCCGGCTTGCTGCATCCTTTCATGAAGAGCCAGGCAGGTCCAGAAGCTTTGTGGTAGATTTCTCATACCCAAGGGTTCCAAGCAGTGTGAGGGATGCGTGGCCTGCTATTCAGCCCAGCGATCGCATGTCCGGTTCAATCCAGTGGCAAGGGGGCCATGAACTCCATCCTCACCGCAGCGCAGTTGCGGGATACAGTGATCACCATGCGTTCAGCAGCCATGGTGGCTCAGCGGCTGGGGCACCAATGCTCCACCACCCAGCCTTTGAGCTCACCTCAGGTGGATGTCTCGCGGGAGTCGCCACCGACTCCAGCTGTGCTCTCTCTCTTCTGTCAACTCAGCCATGGGATACTACCCAAAGCACCAGCAGCCACAACCGGTCCCCGCCAATGTCGTCAACGGCCAGCGCCTTCGGAGGCGGCAACAACCCGGTGTCGCCCTCGGTCATGGCAAGCAACTACATGGCGGCGAGCCCCGGCTGGAACAGCTCCAGCCGGGGCCATGACGGCGCCAGGAACGTGCACCTGCCGCCACCGCACGGGGTTGTGCTGAACGAGGTCCCTCCGGGCTCTGTCCACCACGGCCATTTCTCCGGCGAGCTCGAGCTCGCACTGCAGGGAGGTGCCCCGTCCAACCGGCCGGAAGCCGAGCATGGCTCCGGCAGCGGCGCCTTCAGCCACTCCACCAATGCCATGAACTGGTCTCTGTAGAGACCATTGATCATCTTCTTCCCCACCGTCACTGCGCCTTCATGCCAAGAGACATGGAACATTGGGCAGCCTAGTTTTGTGCTCCTTAACATTGCCATTTAGGTTTTCAGGATGGAGAGGGAATTCGTAACTGATTAGGCCAGTAATTTCCTCTCGTTGAGCCTGATGTGTCCATGAATTCAAAACACCCGAAGAGATCCACTACCTGTAGAACTCCATAAACTGGGAGAATTGATGTGTTTTACTTGACCTATTTTAATCTCG]

[+] EMBL AK063561             [AGCGGCAATAAAAAGAAGAGAGAGAGAGAGAGAGAGAGAGGCTAGGCAGCTAGCAGGAGGAGGAAGGGACCGACCACCGCCTGCCGCAATGGCGACCGGCGGCAGCGGCGGCGGCGGCGGAGGTGGAGGTGGTGGTGACGATGTCCACGGCCGCCACAAGGTGTGCTACATGCACGCCAAGGAGCCCATCGTCGTCGTCGCCGGCCTCGAGCAGCGCTTCTGCCAACAGTGCAGCAGGTTCCACCAATTACCTGAATTTGATCAAGAAAAAAAAAGCTGCCGCAGACGCCTTGCAGGTCACAATGAACGCCGGAGGAAGCCGACACCTGGACCTCTTTCTTCTCGCTATGGCCGGCTTGCTGCATCCTTTCATGAAGAGCCAGGCAGGTCCAGAAGCTTTGTGGTAGATTTCTCATACCCAAGGGTTCCAAGCAGTGTGAGGGATGCGTGGCCTGCTATTCAGCCCAGCGATCGCATGTCCGGTTCAATCCAGTGGCAAGGGGGCCATGAACTCCATCCTCACCGCAGCGCAGTTGCGGGATACAGTGATCACCATGCGTTCAGCAGCCATGGTGGCTCAGCGGCTGGGGCACCAATGCTCCACCACCCAGCCTTTGAGCTCACCTCAGGTGGATGTCTCGCGGGAGTCGCCACCGACTCCAGCTGTGCTCTCTCTCTTCTGTCAACTCAGCCATGGGATACTACCCAAAGCACCAGCAGCCACAACCGGTCCCCGCCAATGTCGTCAACGGCCAGCGCCTTCGGAGGCGGCAACAACCCGGTGTCGCCCTCGGTCATGGCAAGCAACTACATGGCGGCGAGCCCCGGCTGGAACAGCTCCAGCCGGGGCCATGACGGCGCCAGGAACGTGCACCTGCCGCCACCGCACGGGGTTGTGCTGAACGAGGTCCCTCCGGGCTCTGTCCACCACGGCCATTTCTCCGGCGAGCTCGAGCTCGCACTGCAGGGAGGTGCCCCGTCCAACCGGCCGGAAGCCGAGCATGGCTCCGGCAGCGGCGCCTTCAGCCACTCCACCAATGCCATGAACTGGTCTCTGTAGAGACCATTGATCATCTTCTTCCCCACCGTCACTGCGCCTTCATGCCAAGAGACATGGAACATTGGGCAGCCTAGTTTTGTGCTCCTTAACATTGCCATTTAGGTTTTCAGGATGGAGAGGGAATTCGTAACTGATTAGGCCAGTAATTTCCTCTCGTTGAGCCTGATGTGTCCATGAATTCAAAACACCCGAAGAGATCCACTACCTGTAGAACTCCATAAACTGGGAGAATTGATGTGTTTTACTTGACCTATTTTAATCTCG]


>consensus_4731#1 AGCGGCAATAAAAAGAAGAGAGAGAGAGAGAGAGAGAGAGGCTAGGCAGCTAGCAGGAGG AGGAAGGGACCGACCACCGCCTGCCGCAATGGCGACCGGCGGCAGCGGCGGCGGCGGCGG AGGTGGAGGTGGTGGTGACGATGTCCACGGCCGCCACAAGGTGTGCTACATGCACGCCAA GGAGCCCATCGTCGTCGTCGCCGGCCTCGAGCAGCGCTTCTGCCAACAGTGCAGCAGGTT CCACCAATTACCTGAATTTGATCAAGAAAAAAAAAGCTGCCGCAGACGCCTTGCAGGTCA CAATGAACGCCGGAGGAAGCCGACACCTGGACCTCTTTCTTCTCGCTATGGCCGGCTTGC TGCATCCTTTCATGAAGAGCCAGGCAGGTCCAGAAGCTTTGTGGTAGATTTCTCATACCC AAGGGTTCCAAGCAGTGTGAGGGATGCGTGGCCTGCTATTCAGCCCAGCGATCGCATGTC CGGTTCAATCCAGTGGCAAGGGGGCCATGAACTCCATCCTCACCGCAGCGCAGTTGCGGG ATACAGTGATCACCATGCGTTCAGCAGCCATGGTGGCTCAGCGGCTGGGGCACCAATGCT CCACCACCCAGCCTTTGAGCTCACCTCAGGTGGATGTCTCGCGGGAGTCGCCACCGACTC CAGCTGTGCTCTCTCTCTTCTGTCAACTCAGCCATGGGATACTACCCAAAGCACCAGCAG CCACAACCGGTCCCCGCCAATGTCGTCAACGGCCAGCGCCTTCGGAGGCGGCAACAACCC GGTGTCGCCCTCGGTCATGGCAAGCAACTACATGGCGGCGAGCCCCGGCTGGAACAGCTC CAGCCGGGGCCATGACGGCGCCAGGAACGTGCACCTGCCGCCACCGCACGGGGTTGTGCT GAACGAGGTCCCTCCGGGCTCTGTCCACCACGGCCATTTCTCCGGCGAGCTCGAGCTCGC ACTGCAGGGAGGTGCCCCGTCCAACCGGCCGGAAGCCGAGCATGGCTCCGGCAGCGGCGC CTTCAGCCACTCCACCAATGCCATGAACTGGTCTCTGTAGAGACCATTGATCATCTTCTT CCCCACCGTCACTGCGCCTTCATGCCAAGAGACATGGAACATTGGGCAGCCTAGTTTTGT GCTCCTTAACATTGCCATTTAGGTTTTCAGGATGGAGAGGGAATTCGTAACTGATTAGGC CAGTAATTTCCTCTCGTTGAGCCTGATGTGTCCATGAATTCAAAACACCCGAAGAGATCC ACTACCTGTAGAACTCCATAAACTGGGAGAATTGATGTGTTTTACTTGACCTATTTTAAT CTCG



consensusID : consensus_4731#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [CNGGNACGCGTGGGCGGACGCGTGGGTGCTCTGCAGGGGNACGGTCCAGCCCCNNCACCACGCATCGATNCTGGGTCCGGCAGCACCTTCGACCAAACCAGCAACACGATGGATTGGTCTCTGTAGAGGCTGTTCCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAACTGAAGAACCTCATGCTGCCTGCCCTTATTTTGTGTTCAAATTTTCCTTTCCAGTATGGAAAGGAAATTCTAAGGTGACTGGCGATTAATCTCCCTGTGATGAATAATAATGCGCGCCCTTGAACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTTAAGTATCAGTGTTAATGCTGTATTGTCGAGGACTTCTGCNCGATATGTAATTCNCTAATGTGGTCACCATGAATCTTTTTCTGCTTA]

[+] EMBL AU164300             [CNGGNACGCGTGGGCGGACGCGTGGGTGCTCTGCAGGGGNACGGTCCAGCCCCNNCACCACGCATCGATNCTGGGTCCGGCAGCACCTTCGACCAAACCAGCAACACGATGGATTGGTCTCTGTAGAGGCTGTTCCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAACTGAAGAACCTCATGCTGCCTGCCCTTATTTTGTGTTCAAATTTTCCTTTCCAGTATGGAAAGGAAATTCTAAGGTGACTGGCGATTAATCTCCCTGTGATGAATAATAATGCGCGCCCTTGAACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTTAAGTATCAGTGTTAATGCTGTATTGTCGAGGACTTCTGCNCGATATGTAATTCNCTAATGTGGTCACCATGAATCTTTTTCTGCTTA]


>consensus_4731#2 CNGGNACGCGTGGGCGGACGCGTGGGTGCTCTGCAGGGGNACGGTCCAGCCCCNNCACCA CGCATCGATNCTGGGTCCGGCAGCACCTTCGACCAAACCAGCAACACGATGGATTGGTCT CTGTAGAGGCTGTTCCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAACTG AAGAACCTCATGCTGCCTGCCCTTATTTTGTGTTCAAATTTTCCTTTCCAGTATGGAAAG GAAATTCTAAGGTGACTGGCGATTAATCTCCCTGTGATGAATAATAATGCGCGCCCTTGA ACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTTAAGTATCA GTGTTAATGCTGTATTGTCGAGGACTTCTGCNCGATATGTAATTCNCTAATGTGGTCACC ATGAATCTTTTTCTGCTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4731#0      TTTCCTCTCTCTTCTCTCTCCCCCTCTCCTGGAGGAGAGAGAGGAGAAGAGGAGGGGGGG 60
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      ------------------------------------------------------------
                                                                                  

consensus_4731#0      CCGCGCCAAGAGCCACGCGCGCTACAGTCTCCTTCCCACCCGCGACCGCGAGCAATGGAG 120
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      ------------------------------------------------------------
                                                                                  

consensus_4731#0      ATGGCCAGTGGAGGAGGCGCCGCCGCCGCCGCCGGCGGCGGAGTAGGCGGCAGCGGCGGC 180
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      ------------------------------------------------------------
                                                                                  

consensus_4731#0      GGTGGTGGTGGAGGGGACGAGCACCGCCAGCTGCACGGTCTCAAGTTCGGCAAGAAGATC 240
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      ------------------------------------------------------------
                                                                                  

consensus_4731#0      TACTTCGAGGACGCCGCCGCGGCAGCAGGCGGCGGCGGCACTGGCAGTGGCAGTGGCAGC 300
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      ------------------------------------------------------------
                                                                                  

consensus_4731#0      GCGAGCGCCGCGCCGCCGTCCTCGTCTTCCAAGGCGGCGGGTGGTGGACGCGGCGGAGGG 360
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      --------------------------AGCGGCAATAAAAAGAAGAGAGAGAGAGAGAGAG 34
                                                                                  

consensus_4731#0      GGCAAGAACAAGGGGAAGGGCGTGGCCGCGGCGGCGCCACCGCCGCCGCCGCCGCCGCCG 420
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      AGAGAGGCTAGGCAGCTAGCAGGAGGAGGAAGGGACCGACCACCGCCTGCCGCAATGGCG 94
                                                                                  

consensus_4731#0      CGGTGCCAGGTGGAGGGGTGCGGCGCGGATCTGAGCGGGATCAAGAACTACTACTGCCGC 480
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      ACCGGCGGCAGCGGCGGCGGCGGCGGAGGTGGAGGTGGTGGTGACGATGTCCACGGCCGC 154
                                                                                  

consensus_4731#0      CACAAGGTGTGCTTCATGCATTCCAAGGCTCCCCGCGTCGTCGTCGCCGGCCTCGAGCAG 540
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      CACAAGGTGTGCTACATGCACGCCAAGGAGCCCATCGTCGTCGTCGCCGGCCTCGAGCAG 214
                                                                                  

consensus_4731#0      CGCTTCTGCCAGCAGTGCAGCAGGTTCCACCTGCTGCCTGAATTTGACCAAGGAAAACGC 600
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      CGCTTCTGCCAACAGTGCAGCAGGTTCCACCAATTACCTGAATTTGATCAAGAAAAAAAA 274
                                                                                  

consensus_4731#0      AGCTGCCGCAGACGCCTTGCAGGTCATAATGAGCGCCGGAGGAGGCCGCAAACC---CCT 657
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      AGCTGCCGCAGACGCCTTGCAGGTCACAATGAACGCCGGAGGAAGCCGACACCTGGACCT 334
                                                                                  

consensus_4731#0      TTGGCATCACGCTACGGTCGACTAGCTGCATCTGTTGGTGAGCATC---GCAGGTTCAGA 714
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      CTTTCTTCTCGCTATGGCCGGCTTGCTGCATCCTTTCATGAAGAGCCAGGCAGGTCCAGA 394
                                                                                  

consensus_4731#0      AGCTTTACGTTGGATTTCTCCTACCCAAGGGTTCCAAGCAGCGTAAGGAATGCATGGCCA 774
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      AGCTTTGTGGTAGATTTCTCATACCCAAGGGTTCCAAGCAGTGTGAGGGATGCGTGGCCT 454
                                                                                  

consensus_4731#0      GCAATTCAACCAGGCGATCGGATCTCCGGTGGTATCCAGTGGCACAGGAACGTAGCTCCT 834
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      GCTATTCAGCCCAGCGATCGCATGTCCGGTTCAATCCAGTGGCAAGGGGGCCATGAACTC 514
                                                                                  

consensus_4731#0      CATGGTCACTCTAGTGCAGTGGCGGGATATGGTGCCAAC---ACATACAGCGGCCAAGGT 891
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      CATCCTCACCGCAGCGCAGTTGCGGGATACAGTGATCACCATGCGTTCAGCAGCCATGGT 574
                                                                                  

consensus_4731#0      AGCTCTTCTTCAGGGCCACCGGTGTTCGCTGGCCCAAATCTCCCTCCAGGTGGATGTCTC 951
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      GGCTCAGCGGCTGGGGCACCAATGCTCCACCACCCAGCCTTTGAGCTCACCTCAGGTGGA 634
                                                                                  

consensus_4731#0      GCAGGGGTCGGTGCCGCCACCGACTCGAGCTGTGCTCTCTCTCTTCTGTCAACCCAGCCA 1011
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      TGTCTCGCGGGAGTCGCCACCGACTCCAGCTGTGCTCTCTCTCTTCTGTCAACTCAGCCA 694
                                                                                  

consensus_4731#0      TGGGATACTACTACCCACAGTGCCGCTGCCAGCCACAACCAGGCTG---CAGCCATGTCC 1068
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      TGGGATACTACCCAAAGCACCAGCAGCCACAACCGGTCCCCGCCAATGTCGTCAACGGCC 754
                                                                                  

consensus_4731#0      ACTACCACCAGCTTTGATGGCAATCCTGTGGCACCCTCCGCCATGGCGGGTAGCTACATG 1128
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      AGCGCCTTCGGAGGCGGCAACAACCCGGTGTCGCCCTCGGTCATGGCAAGCAACTACATG 814
                                                                                  

consensus_4731#0      GCACCAAGCCCC---TGGACAGGTTCTCGGGGCCATGAGGGTGGTGGTCGGAGCGTGGCG 1185
consensus_4731#2      ------------------------------------------------------------
consensus_4731#1      GCGGCGAGCCCCGGCTGGAACAGCTCCAGCCGGGGCCATGACGGCGCCAGGAACGTGCAC 874
                                                                                  

consensus_4731#0      CACCAGCTACCACATGAAGTCTCACTTGATGAGGTGCACCCTGGTCCTAGCCATCATGCC 1245
consensus_4731#2      ------------------------------------------------------CNGGNA 6
consensus_4731#1      CTGCCGCCACCGCACGGGGTTGTGCTGAACGAGGTCCCTCCGGGCTCTGTCCACCACGGC 934
                                                                            *  *  

consensus_4731#0      CACTTCTCCGGTGAGCTTGAGCTTGCTCTGCAGGGGAACGGTCCAGCCCCAGCACCACGC 1305
consensus_4731#2      CGCGT---GGGCGGACGCGTGGGTGCTCTGCAGGGGNACGGTCCAGCCCCNNCACCACGC 63
consensus_4731#1      CATTTCTCCGGCGAGCTCGAGCTCGCACTGCAGGGAGGTGCCCCGTCCAACCGGCCGGAA 994
                      *   *    ** *  *  * *   ** ********    *  **  **      **    

consensus_4731#0      ATCGATCCTGGGTCCGGCAGCA---CCTTCGACCAAACCAGCAACACGATGGATTGGTCT 1362
consensus_4731#2      ATCGATNCTGGGTCCGGCAGCA---CCTTCGACCAAACCAGCAACACGATGGATTGGTCT 120
consensus_4731#1      GCCGAGCATGGCTCCGGCAGCGGCGCCTTCAGCCACTCCACCAATGCCATGAACTGGTCT 1054
                        ***   *** *********    *****  ***  *** ***  * *** * ******

consensus_4731#0      CTGTAGAGGCTGTT--CCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAAC 1420
consensus_4731#2      CTGTAGAGGCTGTT--CCAGCTGCCATCGATCTGTCGTCCCGCAAGGCGAGTCATGGAAC 178
consensus_4731#1      CTGTAGAGACCATTGATCATCTTCTTCCCCACCGTCACTGCGCCTT-CATGCCAAGAGAC 1113
                      ******** *  **   ** ** *   *   * ***    ***    *  * ** *  **

consensus_4731#0      TGAAGAACCTCATGCTGCCTGCCCTTAT-----TTTGTGTTCAAATTTTCCTTTCCAGTA 1475
consensus_4731#2      TGAAGAACCTCATGCTGCCTGCCCTTAT-----TTTGTGTTCAAATTTTCCTTTCCAGTA 233
consensus_4731#1      -ATGGAACATTGGGCAGCCTAGTTTTGTGCTCCTTAACATTGCCATTTAGGTTTTCAGGA 1172
                          **** *   ** ****    ** *     **    **   ****   *** *** *

consensus_4731#0      TGGAAAGGAAATTCTAAGGTGACT-GGCGATTAATCTCCCTGTGATGAATAATAATGCGC 1534
consensus_4731#2      TGGAAAGGAAATTCTAAGGTGACT-GGCGATTAATCTCCCTGTGATGAATAATAATGCGC 292
consensus_4731#1      TGGAGAGGGAATTCGTAACTGATTAGGCCAGTAATTTCCTCTCGTTGAGCC-TGATGTG- 1230
                      **** *** *****  *  *** * *** * **** ***    * ***    * *** * 

consensus_4731#0      GCCCTTGAACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTT 1594
consensus_4731#2      GCCCTTGAACTCAATTAATTGCTGTGCCGCATCCATCTATGTAACTCTCCATGAATTTTT 352
consensus_4731#1      -TCCATGAATTCAA--AACACCCGAAGAGATCCACTACCTGTAGAACTCCATAAACTGG- 1286
                        ** **** ****  **   * *    *   *  *   ****   ****** ** *   

consensus_4731#0      AAGTATCAGTG------------------------------------------------- 1605
consensus_4731#2      AAGTATCAGTGTTAATGCTGTATTGTCGAGGACTTCTGCNCGATATGTAATTCNCTAATG 412
consensus_4731#1      GAGAATTGATGT----GTTTTACTTGACCTATTTTAATCTCG------------------ 1324
                       ** **   **                                                 

consensus_4731#0      ---------------------------
consensus_4731#2      TGGTCACCATGAATCTTTTTCTGCTTA 439
consensus_4731#1      ---------------------------
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)