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Oryza sativa
cluster # 4732 cluster # 4732       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4732#0 length = 1235 sequences # 3  

consensusID : consensus_4732#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1235
fasta sequence
                              [GACGCGAGCCGACGGATTTTCCCAGAATGGCGCACGCGCGCGCCCAGGCGATCCGCGCGCTGCTCGCCAGGTGCTCGACGGAATGCCCCCGCCGCGCCGCCGCCTCGTCCTGCATCCGCCGCGCTTCTCTCCCTTATTGTTCCCCAGGTTCCTATCCCCGGAGCCTCCTCCCTGCGGTGCGCGCGGCTGGCGCGGATTGGACGCGCTCTCTCGCGAGCAGGGCGCAGGGCGGCGCTGGCGCAGGCGAGGCCGGCGCCGAGGAGGGTGAGGCGCAGGAGTGGATGGCGGAGTGGGAGGAGGAGGAGGAGGAGGAGGAAGATGTCGAGCCCGAGATCGGTGACGGTGGCGACGGCGGTGGGGTCGCCCTGAGGGGCGTCGAGTGGGGGAAGCGCGCTCTGGCGGCGGCCGAGGAGGTTCTTGGCGAGCACTTCGGCGACGACGTTGCGATGTTCGCCTTCAAGGTGTCGCCCAAGGGATACGTCTACGTCAGGCTTGACAAGCTCACCAACAGATATGGGTGCCCTGGTATCGAGGAAATCGAGAGTTTTAATAAACTCTACAAGCAGAAACTGGACGAGCTAATCGAACAAGGCGAAATACCGCTGGACCTGGCAATTGAGGTCTCATCACCAGGAGCCGAACGACTTCTCAAGGTGCCCAAGGATCTGGATCGTTTTAAAGATATGGCCATGAGGGTGCAATACCTTGTTGAAGGCGATGATGTCGTCCCGAAGCAGATCCTGCAGAAGGATGGAATCTTCTTGCTCGAGTCTGTTGACATTCAGGCAGAACATTGCATCTGGAAGCTGGCAGATGTCAAGGAGAACCGAGCTGCAGCTGGGAAAGGAAGGCCATTGAACAGGAAAAAAAGGGACTGGAGGCTGCAAACTTCGTTCCA-AGCA-GTGAAGAAGGCAACACTATACTTGGACTAAACCATGATGGCATATGTTTGGACAGAACTGATTTAGAACCAAATCCAGTATTAGTTTAAATTGGAACGGAATCTCGCATACTCTCTGTAATACTTGCAATACTGGCAAAGGATGTTCAGTTCTGCAGTTAGATTAGCGTCTACTTTATTTGTGGAACTGAATGAATTTTCTGGAGGCCAAATTCATTGCAAGACCCAGTTATTATCTCTGAATTACATGCTGAGTAGAACACAGAATAGCATGGCAAATGTATCTGGGAAGCAATACATTATATGGAATCACTCATTTTGGGTAAAAAAAAAA]

[+] EMBL AK061006             [GACGCGAGCCGACGGATTTTCCCAGAATGGCGCACGCGCGCGCCCAGGCGATCCGCGCGCTGCTCGCCAGGTGCTCGACGGAATGCCCCCGCCGCGCCGCCGCCTCGTCCTGCATCCGCCGCGCTTCTCTCCCTTATTGTTCCCCAGGTTCCTATCCCCGGAGCCTCCTCCCTGCGGTGCGCGCGGCTGGCGCGGATTGGACGCGCTCTCTCGCGAGCAGGGCGCAGGGCGGCGCTGGCGCAGGCGAGGCCGGCGCCGAGGAGGGTGAGGCGCAGGAGTGGATGGCGGAGTGGGAGGAGGAGGAGGAGGAGGAGGAAGATGTCGAGCCCGAGATCGGTGACGGTGGCGACGGCGGTGGGGTCGCCCTGAGGGGCGTCGAGTGGGGGAAGCGCGCTCTGGCGGCGGCCGAGGAGGTTCTTGGCGAGCACTTCGGCGACGACGTTGCGATGTTCGCCTTCAAGGTGTCGCCCAAGGGATACGTCTACGTCAGGCTTGACAAGCTCACCAACAGATATGGGTGCCCTGGTATCGAGGAAATCGAGAGTTTTAATAAACTCTACAAGCAGAAACTGGACGAGCTAATCGAACAAGGCGAAATACCGCTGGACCTGGCAATTGAGGTCTCATCACCAGGAGCCGAACGACTTCTCAAGGTGCCCAAGGATCTGGATCGTTTTAAAGATATGGCCATGAGGGTGCAATACCTTGTTGAAGGCGATGATGTCGTCCCGAAGCAGATCCTGCAGAAGGATGGAATCTTCTTGCTCGAGTCTGTTGACATTCAGGCAGAACATTGCATCTGGAAGCTGGCAGATGTCAAGGAGAACCGAGCTGCAGCTGGGAAAGGAAGGCCATTGAACAGGAAAAAAAGGGACTGGAGGCTGCAAACTTCGTTCCA AGCA GTGAAGAAGGCAACACTATACTTGGACTAAACCATGATGGCATATGTTTGGACAGAACTGATTTAGAACCAAATCCAGTATTAGTTTAAATTGGAACGGAATCTCGCATACTCTCTGTAATACTTGCAATACTGGCAAAGGATGTTCAGTTCTGCAGTTAGATTAGCGTCTACTTTATTTGTGGAACTGAATGAATT                                                                                                                                        ]
[+] EMBL AK104606             [GACGCGAGCCGACGGATTTTCCCAGAATGGCGCACGCGCGCGCCCAGGCGATCCGCGCGCTGCTCGCCAGGTGCTCGACGGAATGCCCCCGCCGCGCCGCCGCCTCGTCCTGCATCCGCCGCGCTTCTCTCCCTTATTGTTCCCCAGGTTCCTATCCCCGGAGCCTCCTCCCTGCGGTGCGCGCGGCTGGCGCGGATTGGACGCGCTCTCTCGCGAGCAGGGCGCAGGGCGGCGCTGGCGCAGGCGAGGCCGGCGCCGAGGAGGGTGAGGCGCAGGAGTGGATGGCGGAGTGGGAGGAGGAGGAGGAGGAGGAGGAAGATGTCGAGCCCGAGATCGGTGACGGTGGCGACGGCGGTGGGGTCGCCCTGAGGGGCGTCGAGTGGGGGAAGCGCGCTCTGGCGGCGGCCGAGGAGGTTCTTGGCGAGCACTTCGGCGACGACGTTGCGATGTTCGCCTTCAAGGTGTCGCCCAAGGGATACGTCTACGTCAGGCTTGACAAGCTCACCAACAGATATGGGTGCCCTGGTATCGAGGAAATCGAGAGTTTTAATAAACTCTACAAGCAGAAACTGGACGAGCTAATCGAACAAGGCGAAATACCGCTGGACCTGGCAATTGAGGTCTCATCACCAGGAGCCGAACGACTTCTCAAGGTGCCCAAGGATCTGGATCGTTTTAAAGATATGGCCATGAGGGTGCAATACCTTGTTGAAGGCGATGATGTCGTCCCGAAGCAGATCCTGCAGAAGGATGGAATCTTCTTGCTCGAGTCTGTTGACATTCAGGCAGAACATTGCATCTGGAAGCTGGCAGATGTCAAGGAGAACCGAGCTGCAGCTGGGAAAGGAAGGCCATTGAACAGGAAAAAAAGGGACTGGAGGCTGCAAACTTCGTTCCA AGCA GTGAAGAAGGCAACACTATACTTGGACTAAACCATGATGGCATATGTTTGGACAGAACTGATTTAGAACCAAATCCAGTATTAGTTTAAATTGGAACGGAATCTCGCATACTCTCTGTAATACTTGCAATACTGGCAAAGGATGTTCAGTTCTGCAGTTAGATTAGCGTCTACTTTATTTGTGGAACTGAATGAATT                                                                                                                                        ]
[+] EMBL BI805150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCTGCAAACTTCGTTCCACAGCACGTGAAGAAGGCAACACTATACTTGGACTAAACCCTGATGGCATATGTTTGGACAGAACTGATTTAGAACCCAATCCAGTATTAGTTTAAATTGGAACGGAATCTCGCATACTCTCTGTAATACTTGCCATACTGGCCAAGGATGTTCAGTTCTGCAGTTAGATTAGCGTCTACTTTATTTGTGGAACTGAATGAATTTTCTGGAGGCCAAATTCATTGCAAGACCCAGTTATTATCTCTGAATTACATGCTGAGTAGAACACAGAATAGCATGGCAAATGTATCTGGGAAGCAATACATTATATGGAATCACTCATTTTGGGTAAAAAAAAAA]


>consensus_4732#0 GACGCGAGCCGACGGATTTTCCCAGAATGGCGCACGCGCGCGCCCAGGCGATCCGCGCGC TGCTCGCCAGGTGCTCGACGGAATGCCCCCGCCGCGCCGCCGCCTCGTCCTGCATCCGCC GCGCTTCTCTCCCTTATTGTTCCCCAGGTTCCTATCCCCGGAGCCTCCTCCCTGCGGTGC GCGCGGCTGGCGCGGATTGGACGCGCTCTCTCGCGAGCAGGGCGCAGGGCGGCGCTGGCG CAGGCGAGGCCGGCGCCGAGGAGGGTGAGGCGCAGGAGTGGATGGCGGAGTGGGAGGAGG AGGAGGAGGAGGAGGAAGATGTCGAGCCCGAGATCGGTGACGGTGGCGACGGCGGTGGGG TCGCCCTGAGGGGCGTCGAGTGGGGGAAGCGCGCTCTGGCGGCGGCCGAGGAGGTTCTTG GCGAGCACTTCGGCGACGACGTTGCGATGTTCGCCTTCAAGGTGTCGCCCAAGGGATACG TCTACGTCAGGCTTGACAAGCTCACCAACAGATATGGGTGCCCTGGTATCGAGGAAATCG AGAGTTTTAATAAACTCTACAAGCAGAAACTGGACGAGCTAATCGAACAAGGCGAAATAC CGCTGGACCTGGCAATTGAGGTCTCATCACCAGGAGCCGAACGACTTCTCAAGGTGCCCA AGGATCTGGATCGTTTTAAAGATATGGCCATGAGGGTGCAATACCTTGTTGAAGGCGATG ATGTCGTCCCGAAGCAGATCCTGCAGAAGGATGGAATCTTCTTGCTCGAGTCTGTTGACA TTCAGGCAGAACATTGCATCTGGAAGCTGGCAGATGTCAAGGAGAACCGAGCTGCAGCTG GGAAAGGAAGGCCATTGAACAGGAAAAAAAGGGACTGGAGGCTGCAAACTTCGTTCCAAG CAGTGAAGAAGGCAACACTATACTTGGACTAAACCATGATGGCATATGTTTGGACAGAAC TGATTTAGAACCAAATCCAGTATTAGTTTAAATTGGAACGGAATCTCGCATACTCTCTGT AATACTTGCAATACTGGCAAAGGATGTTCAGTTCTGCAGTTAGATTAGCGTCTACTTTAT TTGTGGAACTGAATGAATTTTCTGGAGGCCAAATTCATTGCAAGACCCAGTTATTATCTC TGAATTACATGCTGAGTAGAACACAGAATAGCATGGCAAATGTATCTGGGAAGCAATACA TTATATGGAATCACTCATTTTGGGTAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)