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Oryza sativa
cluster # 4739 cluster # 4739       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4739#0 length = 3786 sequences # 2  
 consensus_4739#1 length = 570 sequences # 1  
consensusID : consensus_4739#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3786
fasta sequence 
                              [CCTTGTTCGCCGCCGGCGCCTTCTCGCGCGGCGGAATCAGGCCGCCGCGCTAGGCTTGGCGAGTGTGCGTCGCCCGTCGGCGGCTTCCGCCCGCCCGGACTACCGCATCCTTCTGCCCTCTCCTGGGACGACGAGTCTCTCTTCCTGTTCCGGTGTCCCGGCGTGTTCCGGGCCTTCGACCCGGTGGGTGGGTCAGCGTGCAGGCCGCGCCTCTCCCCTGGAGCAGCAGAGCTTGACATGGATGGGAACATGACTTCTTGGAATGGCAATGACAGATGGAATTACTTCTTAAGGGCTTCCAGAAACAATTCAATGCTCTGGAGAATAAAAAGTATTTTCGTTCTATGATCTCTTTGGTTGTGGCTATTTTTGGAGAATGAGCTACAGCTGGTGGACTTCTTTCAAAGGTGCCACATACGAAGAGGAAGTCAGGAAGGAACAAAGTTTACTTCATGCCCCTTATTTGCCTCTCAGTTGGTTTCATCCTACTGCATACCAGTGCGAGTCTTGTGACTGAACTCATGACACAGTTGATTTCTCCCAATGTGTTCTCAATTGATAGCAGATGGGGGTCAACAATATCGATCAGTCTTGCTGGATATGCCATTTCTGCATACTTCTGCAATGTCAATCCATCAGTAAACATGTCATTTGTAGGCGCCTTCCCTGTAAACATCTCAAGGAGCACTATACCAAAGCTATATACATCACCAGATGGAGAAATTTGACCACATTCAGCATATTCTGCAGTGCGTAAACGTGATAATTAAGTATTGCATGGCTCAAACCATAAGATTTATTGGAAAATAGTATTGAGTACCTGGAGCAATATATCCAATTGTTCCCATTAGCCCTACAGAACTCTTTGAATTGATCAATTGCTCTCCTTCTGGGTCAGTGAGAATCTTGGCAAGGCCAAGGTCTCCAACATGCGCAACCATGTCCTCCCCAAGAAGAATGTTGCTGGGCTTGAAATCACAGTGAACTATTGTTGGATGGCAGCTGTTGTGCAAATAATCTAGTGCAGCGGCGATATCAGAAGCAATGCTCAATCTCTGCACTAGTGTTAGAACTTTAACTGGATCTGATGAGTGTACCTCCGGATGTAACCATTTATCAAGGTTTCCGTGAGGCATGAACTTGAATACTATGGCTTTAAAGTCATTTTGATTCAAGCCAGAGCAAGAACAGCAAGTTATGACACCAATCAAGTTGCGATGGCGGATTTTGCTAATTGCGTTACACTCAGCCACAAAACTTTTGGAAGAACCAGATTGTTCAAGATTGAAAACCTTGATAGCTACAGTAGTTTCCGACTTTTTGAGCAGCATTGTCCCCTTATAAACAGATCCATACCGTCCAGTGCCAACCAAATTGTTGACATTGAAGCCATTCGTTGATTGAAACAGTTCATAATAGGATACTCGAGGATACATGCCATCTGGCAGAGGTGCTACCGTTGTTCGCATGGATGAAGGTCTTAGTTTCTTCCGTATAGAGAAGACAACAGCTGCCAGGATAAAGCACACAAAGATTGTAACAGCAGTCGGAATAACCACTTTTTGAGTGACTAGAAGTATACTTCGACTATGTTCCATGGGTTTGGTTGGGCATGAAGGCAAATGAAGCTCACGTATACCACCACAAAGCTTATCATTCCCATCAAACTTAAATCCTGTCTTAAATCCTGTCAAATTGGCAAACACTCCATGTGCTGGGACTTGGCCATCAAGGTTATTAAAGGATATGTCAAGCCAATATAATGATGTCATGTTTTCCATGTTCTCTGGGATTTGTGCAGATAGATTATTGTGTGAAAGATATAGCTCTTTCAGTCCATCCATGAGTCTTAAGTCCTGAGGAATTGCACCAAGAAGGCTATTTTTGGTCAAATTTAGCAGTACTAATCCTCGCATTTTGCTCACTGATACAGGAATGGTACCATTAAAGAAGTTATCGTCCAAATGAAGTTCCATCAAGCTCTGACAGTTGCTGAGACTATTTGGTAGCAACCCAGAAAAGTTGTTACTGTACATGTATAAGTATGTAAGTTTTGTGAGACCACCTACTGCTGATGGAAGAGAACCGCTAAAATGATTCCTTGACAGATCCAGAATGTACGACAAGGATGGAAGATTAAAAATATCTCCAGGTAATTGATCTCTAAGTTTATTGTTTGAAAAGGTTGCGATGATAAGTTGTTGCAGGTTCCCAATGCTTGCTGGCAATGGCCCCTCCAAGCTATTGTTATCTAGAGAGAGTTGCTGCAGTTGCGTTAAGTTTCCGAGTGAGGATGGTATGATCCCAGACAATAGGTTATTTTCTAGTGTCAAGTACTGCAGTGTTTCAAGCCTTCCTATGCTGTCAGGTATCGGACCACTGAAACGATTGTTAGAGAGACCCAACTTAATTAGTTTGA-GGAAGTTGTTAATACCATCTGGTATTTTACCTGAAATTTTGTTAAATCCGATATCCAGGAGTTCGAGCTGTGCTGATAGGTTGGTGATAG-AGTTTGGCAGTGCTCCACCAAGCCTGTTGTTTTGTATTGTCACAGCACGAAGTCTTGTGCAATTTGTCAAGAACGTGATGAACCTCCAGTCCTTGACACTGGTTGCCTTCAGCTGGTTTCTTTGCAGCATCAGGTATTTCAGGCAGAGCATTCCAATCTCCGGAGGTATGATTCCAGTGAAGTTGTTAGAAGAGAGGTCTATGGAGCGCATGTTGGTTGCATTTGCTATTGAAGGTGGGATGCTTCCTGTGAAATGGTTCAAGGCAACGATGAAGTATTGGATTTTTGGTAGGCCATTGCCCAAATCAGAAGGCAATCTTCCATGCAACTCATTCTCCTGCAGGCCAATGTGGATCAGCGAGGAAAGGTTGAGGAGTGTTCTTGGGATGGTGCCTGACAGATGATTTACTTGCAGTGCCAACCTCTCAAGACTGCTGATCTTGCCAAGGGCCTCAGGGATTGGTCCAGTGAGGTGATTCTCATTGAGGAAAAGTTCCGACAGCGCCGAGAGGTTGCCAAGTGATTGCGGGATGATCCCGGTGAAGATGTTCTTCCCTACTGAAATGGAATTGAGCTTCAGAAAACCTCCAAACCAATCAGGGATTTTTCCGTTCAGGCTGTTTAAGTCAAGTTTGATGCTAGCAAGGTTAGTGCAGTTCCTTAGTTCATCAGTGATCTCGCCTTGAAGTGAATTGTTTGACAGGTACAGGTAGGATAACTGTGGTAGCTGGCCAATTGTCCTAGGAATTTCACCTTGGAATGAATTGTTTGACAAGTCGAGATATGACAACTTCGACAGCCAACCAATCGTCAAAGGGATTTCACCATAAAGTTGATTGCAACTAAGATCTAGACTTCTCAAATATGTGAGATTCCCAATGGAAGCGGATATGTAGCCATGGAGCCCAGTCGAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGATCAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGATATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTCTGGCAGCTAAAAACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGTGTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACATGGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCATTAGTG]

[+] EMBL AK067540             [CCTTGTTCGCCGCCGGCGCCTTCTCGCGCGGCGGAATCAGGCCGCCGCGCTAGGCTTGGCGAGTGTGCGTCGCCCGTCGGCGGCTTCCGCCCGCCCGGACTACCGCATCCTTCTGCCCTCTCCTGGGACGACGAGTCTCTCTTCCTGTTCCGGTGTCCCGGCGTGTTCCGGGCCTTCGACCCGGTGGGTGGGTCAGCGTGCAGGCCGCGCCTCTCCCCTGGAGCAGCAGAGCTTGACATGGATGGGAACATGACTTCTTGGAATGGCAATGACAGATGGAATTACTTCTTAAGGGCTTCCAGAAACAATTCAATGCTCTGGAGAATAAAAAGTATTTTCGTTCTATGATCTCTTTGGTTGTGGCTATTTTTGGAGAATGAGCTACAGCTGGTGGACTTCTTTCAAAGGTGCCACATACGAAGAGGAAGTCAGGAAGGAACAAAGTTTACTTCATGCCCCTTATTTGCCTCTCAGTTGGTTTCATCCTACTGCATACCAGTGCGAGTCTTGTGACTGAACTCATGACACAGTTGATTTCTCCCAATGTGTTCTCAATTGATAGCAGATGGGGGTCAACAATATCGATCAGTCTTGCTGGATATGCCATTTCTGCATACTTCTGCAATGTCAATCCATCAGTAAACATGTCATTTGTAGGCGCCTTCCCTGTAAACATCTCAAGGAGCACTATACCAAAGCTATATACATCACCAGATGGAGAAATTTGACCACATTCAGCATATTCTGCAGTGCGTAAACGTGATAATTAAGTATTGCATGGCTCAAACCATAAGATTTATTGGAAAATAGTATTGAGTACCTGGAGCAATATATCCAATTGTTCCCATTAGCCCTACAGAACTCTTTGAATTGATCAATTGCTCTCCTTCTGGGTCAGTGAGAATCTTGGCAAGGCCAAGGTCTCCAACATGCGCAACCATGTCCTCCCCAAGAAGAATGTTGCTGGGCTTGAAATCACAGTGAACTATTGTTGGATGGCAGCTGTTGTGCAAATAATCTAGTGCAGCGGCGATATCAGAAGCAATGCTCAATCTCTGCACTAGTGTTAGAACTTTAACTGGATCTGATGAGTGTACCTCCGGATGTAACCATTTATCAAGGTTTCCGTGAGGCATGAACTTGAATACTATGGCTTTAAAGTCATTTTGATTCAAGCCAGAGCAAGAACAGCAAGTTATGACACCAATCAAGTTGCGATGGCGGATTTTGCTAATTGCGTTACACTCAGCCACAAAACTTTTGGAAGAACCAGATTGTTCAAGATTGAAAACCTTGATAGCTACAGTAGTTTCCGACTTTTTGAGCAGCATTGTCCCCTTATAAACAGATCCATACCGTCCAGTGCCAACCAAATTGTTGACATTGAAGCCATTCGTTGATTGAAACAGTTCATAATAGGATACTCGAGGATACATGCCATCTGGCAGAGGTGCTACCGTTGTTCGCATGGATGAAGGTCTTAGTTTCTTCCGTATAGAGAAGACAACAGCTGCCAGGATAAAGCACACAAAGATTGTAACAGCAGTCGGAATAACCACTTTTTGAGTGACTAGAAGTATACTTCGACTATGTTCCATGGGTTTGGTTGGGCATGAAGGCAAATGAAGCTCACGTATACCACCACAAAGCTTATCATTCCCATCAAACTTAAATCCTGTCTTAAATCCTGTCAAATTGGCAAACACTCCATGTGCTGGGACTTGGCCATCAAGGTTATTAAAGGATATGTCAAGCCAATATAATGATGTCATGTTTTCCATGTTCTCTGGGATTTGTGCAGATAGATTATTGTGTGAAAGATATAGCTCTTTCAGTCCATCCATGAGTCTTAAGTCCTGAGGAATTGCACCAAGAAGGCTATTTTTGGTCAAATTTAGCAGTACTAATCCTCGCATTTTGCTCACTGATACAGGAATGGTACCATTAAAGAAGTTATCGTCCAAATGAAGTTCCATCAAGCTCTGACAGTTGCTGAGACTATTTGGTAGCAACCCAGAAAAGTTGTTACTGTACATGTATAAGTATGTAAGTTTTGTGAGACCACCTACTGCTGATGGAAGAGAACCGCTAAAATGATTCCTTGACAGATCCAGAATGTACGACAAGGATGGAAGATTAAAAATATCTCCAGGTAATTGATCTCTAAGTTTATTGTTTGAAAAGGTTGCGATGATAAGTTGTTGCAGGTTCCCAATGCTTGCTGGCAATGGCCCCTCCAAGCTATTGTTATCTAGAGAGAGTTGCTGCAGTTGCGTTAAGTTTCCGAGTGAGGATGGTATGATCCCAGACAATAGGTTATTTTCTAGTGTCAAGTACTGCAGTGTTTCAAGCCTTCCTATGCTGTCAGGTATCGGACCACTGAAACGATTGTTAGAGAGACCCAACTTAATTAGTTTGA GGAAGTTGTTAATACCATCTGGTATTTTACCTGAAATTTTGTTAAATCCGATATCCAGGAGTTCGAGCTGTGCTGATAGGTTGGTGATAG AGTTTGGCAGTGCTCCACCAAGCCTGTTGTTTTGTATTGTCACAGCACGAAGTCTTGTGCAATTTGTCAAGAACGTGATGAACCTCCAGTCCTTGACACTGGTTGCCTTCAGCTGGTTTCTTTGCAGCATCAGGTATTTCAGGCAGAGCATTCCAATCTCCGGAGGTATGATTCCAGTGAAGTTGTTAGAAGAGAGGTCTATGGAGCGCATGTTGGTTGCATTTGCTATTGAAGGTGGGATGCTTCCTGTGAAATGGTTCAAGGCAACGATGAAGTATTGGATTTTTGGTAGGCCATTGCCCAAATCAGAAGGCAATCTTCCATGCAACTCATTCTCCTGCAGGCCAATGTGGATCAGCGAGGAAAGGTTGAGGAGTGTTCTTGGGATGGTGCCTGACAGATGATTTACTTGCAGTGCCAACCTCTCAAGACTGCTGATCTTGCCAAGGGCCTCAGGGATTGGTCCAGTGAGGTGATTCTCATTGAGGAAAAGTTCCGACAGCGCCGAGAGGTTGCCAAGTGATTGCGGGATGATCCCGGTGAAGATGTTCTTCCCTACTGAAATGGAATTGAGCTTCAGAAAACCTCCAAACCAATCAGGGATTTTTCCGTTCAGGCTGTTTAAGTCAAGTTTGATGCTAGCAAGGTTAGTGCAGTTCCTTAGTTCATCAGTGATCTCGCCTTGAAGTGAATTGTTTGACAGGTACAGGTAGGATAACTGTGGTAGCTGGCCAATTGTCCTAGGAATTTCACCTTGGAATGAATTGTTTGACAAGTCGAGATATGACAACTTCGACAGCCAACCAATCGTCAAAGGGATTTCACCATAAAGTTGATTGCAACTAAGATCTAGACTTCTCAAATATGTGAGATTCCCAATGGAAGCGGATATGTAGCCATGGAGCCCAGTCGAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGATCAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGATATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTCTGGCAGCTAAAAACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGTGTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACATGGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCATTAGTG]
[+] EMBL CF276841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTAAAATGATTCCTTGACAGATCCAGAATGTACGACAAGGATGGAAGATTAAAAATATCTCCAGGTAATTGATCTCTAAGTTTATTGTTTGAAAAGGTTGCGATGATAAGTTGTTGCAGGTTCCCAATGCTTGCTGGCAATGGCCCCTCCAAGCTATTGTTATCTAGAGAGAGTTGCTGCAGTTGCGTTAAGTTTCCGAGTGAGGATGGTATGATCCCAGACAATAGGTTATTTTCTAGTGTCAAGTACTGCAGTGTTTCAAGCCTTCCTATGCTGTCAGGTATCGGACCACTGAAACGATTGTTAGAGAGACCCAACTTAATTAGTTTGAGGGAAGTTGTTAATACCATCTGGTATTTTACCTGAAATTTTGTTAAATCCGATATCCAGGAGTTCGAGCTGTGCTGATAGGTTGGTGATAGAAAGTTGGCAGTGCTCCACCAAGCCTGTTGTTTTGTATTGTCACAGCACGAAGTCTTGTGCAATTTGTCAAGAACGTGATGAACCTCCAGTCCTTGACACTGGTTGCCTTCAGCTGGTTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_4739#0
CCTTGTTCGCCGCCGGCGCCTTCTCGCGCGGCGGAATCAGGCCGCCGCGCTAGGCTTGGC
GAGTGTGCGTCGCCCGTCGGCGGCTTCCGCCCGCCCGGACTACCGCATCCTTCTGCCCTC
TCCTGGGACGACGAGTCTCTCTTCCTGTTCCGGTGTCCCGGCGTGTTCCGGGCCTTCGAC
CCGGTGGGTGGGTCAGCGTGCAGGCCGCGCCTCTCCCCTGGAGCAGCAGAGCTTGACATG
GATGGGAACATGACTTCTTGGAATGGCAATGACAGATGGAATTACTTCTTAAGGGCTTCC
AGAAACAATTCAATGCTCTGGAGAATAAAAAGTATTTTCGTTCTATGATCTCTTTGGTTG
TGGCTATTTTTGGAGAATGAGCTACAGCTGGTGGACTTCTTTCAAAGGTGCCACATACGA
AGAGGAAGTCAGGAAGGAACAAAGTTTACTTCATGCCCCTTATTTGCCTCTCAGTTGGTT
TCATCCTACTGCATACCAGTGCGAGTCTTGTGACTGAACTCATGACACAGTTGATTTCTC
CCAATGTGTTCTCAATTGATAGCAGATGGGGGTCAACAATATCGATCAGTCTTGCTGGAT
ATGCCATTTCTGCATACTTCTGCAATGTCAATCCATCAGTAAACATGTCATTTGTAGGCG
CCTTCCCTGTAAACATCTCAAGGAGCACTATACCAAAGCTATATACATCACCAGATGGAG
AAATTTGACCACATTCAGCATATTCTGCAGTGCGTAAACGTGATAATTAAGTATTGCATG
GCTCAAACCATAAGATTTATTGGAAAATAGTATTGAGTACCTGGAGCAATATATCCAATT
GTTCCCATTAGCCCTACAGAACTCTTTGAATTGATCAATTGCTCTCCTTCTGGGTCAGTG
AGAATCTTGGCAAGGCCAAGGTCTCCAACATGCGCAACCATGTCCTCCCCAAGAAGAATG
TTGCTGGGCTTGAAATCACAGTGAACTATTGTTGGATGGCAGCTGTTGTGCAAATAATCT
AGTGCAGCGGCGATATCAGAAGCAATGCTCAATCTCTGCACTAGTGTTAGAACTTTAACT
GGATCTGATGAGTGTACCTCCGGATGTAACCATTTATCAAGGTTTCCGTGAGGCATGAAC
TTGAATACTATGGCTTTAAAGTCATTTTGATTCAAGCCAGAGCAAGAACAGCAAGTTATG
ACACCAATCAAGTTGCGATGGCGGATTTTGCTAATTGCGTTACACTCAGCCACAAAACTT
TTGGAAGAACCAGATTGTTCAAGATTGAAAACCTTGATAGCTACAGTAGTTTCCGACTTT
TTGAGCAGCATTGTCCCCTTATAAACAGATCCATACCGTCCAGTGCCAACCAAATTGTTG
ACATTGAAGCCATTCGTTGATTGAAACAGTTCATAATAGGATACTCGAGGATACATGCCA
TCTGGCAGAGGTGCTACCGTTGTTCGCATGGATGAAGGTCTTAGTTTCTTCCGTATAGAG
AAGACAACAGCTGCCAGGATAAAGCACACAAAGATTGTAACAGCAGTCGGAATAACCACT
TTTTGAGTGACTAGAAGTATACTTCGACTATGTTCCATGGGTTTGGTTGGGCATGAAGGC
AAATGAAGCTCACGTATACCACCACAAAGCTTATCATTCCCATCAAACTTAAATCCTGTC
TTAAATCCTGTCAAATTGGCAAACACTCCATGTGCTGGGACTTGGCCATCAAGGTTATTA
AAGGATATGTCAAGCCAATATAATGATGTCATGTTTTCCATGTTCTCTGGGATTTGTGCA
GATAGATTATTGTGTGAAAGATATAGCTCTTTCAGTCCATCCATGAGTCTTAAGTCCTGA
GGAATTGCACCAAGAAGGCTATTTTTGGTCAAATTTAGCAGTACTAATCCTCGCATTTTG
CTCACTGATACAGGAATGGTACCATTAAAGAAGTTATCGTCCAAATGAAGTTCCATCAAG
CTCTGACAGTTGCTGAGACTATTTGGTAGCAACCCAGAAAAGTTGTTACTGTACATGTAT
AAGTATGTAAGTTTTGTGAGACCACCTACTGCTGATGGAAGAGAACCGCTAAAATGATTC
CTTGACAGATCCAGAATGTACGACAAGGATGGAAGATTAAAAATATCTCCAGGTAATTGA
TCTCTAAGTTTATTGTTTGAAAAGGTTGCGATGATAAGTTGTTGCAGGTTCCCAATGCTT
GCTGGCAATGGCCCCTCCAAGCTATTGTTATCTAGAGAGAGTTGCTGCAGTTGCGTTAAG
TTTCCGAGTGAGGATGGTATGATCCCAGACAATAGGTTATTTTCTAGTGTCAAGTACTGC
AGTGTTTCAAGCCTTCCTATGCTGTCAGGTATCGGACCACTGAAACGATTGTTAGAGAGA
CCCAACTTAATTAGTTTGAGGAAGTTGTTAATACCATCTGGTATTTTACCTGAAATTTTG
TTAAATCCGATATCCAGGAGTTCGAGCTGTGCTGATAGGTTGGTGATAGAGTTTGGCAGT
GCTCCACCAAGCCTGTTGTTTTGTATTGTCACAGCACGAAGTCTTGTGCAATTTGTCAAG
AACGTGATGAACCTCCAGTCCTTGACACTGGTTGCCTTCAGCTGGTTTCTTTGCAGCATC
AGGTATTTCAGGCAGAGCATTCCAATCTCCGGAGGTATGATTCCAGTGAAGTTGTTAGAA
GAGAGGTCTATGGAGCGCATGTTGGTTGCATTTGCTATTGAAGGTGGGATGCTTCCTGTG
AAATGGTTCAAGGCAACGATGAAGTATTGGATTTTTGGTAGGCCATTGCCCAAATCAGAA
GGCAATCTTCCATGCAACTCATTCTCCTGCAGGCCAATGTGGATCAGCGAGGAAAGGTTG
AGGAGTGTTCTTGGGATGGTGCCTGACAGATGATTTACTTGCAGTGCCAACCTCTCAAGA
CTGCTGATCTTGCCAAGGGCCTCAGGGATTGGTCCAGTGAGGTGATTCTCATTGAGGAAA
AGTTCCGACAGCGCCGAGAGGTTGCCAAGTGATTGCGGGATGATCCCGGTGAAGATGTTC
TTCCCTACTGAAATGGAATTGAGCTTCAGAAAACCTCCAAACCAATCAGGGATTTTTCCG
TTCAGGCTGTTTAAGTCAAGTTTGATGCTAGCAAGGTTAGTGCAGTTCCTTAGTTCATCA
GTGATCTCGCCTTGAAGTGAATTGTTTGACAGGTACAGGTAGGATAACTGTGGTAGCTGG
CCAATTGTCCTAGGAATTTCACCTTGGAATGAATTGTTTGACAAGTCGAGATATGACAAC
TTCGACAGCCAACCAATCGTCAAAGGGATTTCACCATAAAGTTGATTGCAACTAAGATCT
AGACTTCTCAAATATGTGAGATTCCCAATGGAAGCGGATATGTAGCCATGGAGCCCAGTC
GAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGAT
CAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGAT
ATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTCTGGCAGCTAAA
AACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGT
GTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACAT
GGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCA
TTAGTG

consensusID : consensus_4739#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 570
fasta sequence 
                              [TCACCATAAAGTTGATTGCAACTAAGATCTAGACTTCTCAAATATGTGAGATTCCCAATGGAAGCGGATATGTAGCCATGGAGCCCAGTCGAGGTGAGATTCAGTGCTAATACCCTTTGCTTATGCCTATGACTGCAGATGACACCAGACCACTGACAGTAGCTTGTTGTTGTGTTCCATGAAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGATCAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGATATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTTTGGCAGCTAAAAACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGTGTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACATGGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCATTAGTGTTATAATGCTAAAAAAAAAAAAA]

[-] EMBL CF276842             [TCACCATAAAGTTGATTGCAACTAAGATCTAGACTTCTCAAATATGTGAGATTCCCAATGGAAGCGGATATGTAGCCATGGAGCCCAGTCGAGGTGAGATTCAGTGCTAATACCCTTTGCTTATGCCTATGACTGCAGATGACACCAGACCACTGACAGTAGCTTGTTGTTGTGTTCCATGAAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGATCAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGATATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTTTGGCAGCTAAAAACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGTGTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACATGGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCATTAGTGTTATAATGCTAAAAAAAAAAAAA]




>consensus_4739#1
TCACCATAAAGTTGATTGCAACTAAGATCTAGACTTCTCAAATATGTGAGATTCCCAATG
GAAGCGGATATGTAGCCATGGAGCCCAGTCGAGGTGAGATTCAGTGCTAATACCCTTTGC
TTATGCCTATGACTGCAGATGACACCAGACCACTGACAGTAGCTTGTTGTTGTGTTCCAT
GAAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGA
TCAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGA
TATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTTTGGCAGCTAA
AAACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAG
TGTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACA
TGGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTC
ATTAGTGTTATAATGCTAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4739#0      CCTTGTTCGCCGCCGGCGCCTTCTCGCGCGGCGGAATCAGGCCGCCGCGCTAGGCTTGGC 60
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GAGTGTGCGTCGCCCGTCGGCGGCTTCCGCCCGCCCGGACTACCGCATCCTTCTGCCCTC 120
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TCCTGGGACGACGAGTCTCTCTTCCTGTTCCGGTGTCCCGGCGTGTTCCGGGCCTTCGAC 180
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CCGGTGGGTGGGTCAGCGTGCAGGCCGCGCCTCTCCCCTGGAGCAGCAGAGCTTGACATG 240
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GATGGGAACATGACTTCTTGGAATGGCAATGACAGATGGAATTACTTCTTAAGGGCTTCC 300
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGAAACAATTCAATGCTCTGGAGAATAAAAAGTATTTTCGTTCTATGATCTCTTTGGTTG 360
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TGGCTATTTTTGGAGAATGAGCTACAGCTGGTGGACTTCTTTCAAAGGTGCCACATACGA 420
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGAGGAAGTCAGGAAGGAACAAAGTTTACTTCATGCCCCTTATTTGCCTCTCAGTTGGTT 480
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TCATCCTACTGCATACCAGTGCGAGTCTTGTGACTGAACTCATGACACAGTTGATTTCTC 540
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CCAATGTGTTCTCAATTGATAGCAGATGGGGGTCAACAATATCGATCAGTCTTGCTGGAT 600
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      ATGCCATTTCTGCATACTTCTGCAATGTCAATCCATCAGTAAACATGTCATTTGTAGGCG 660
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CCTTCCCTGTAAACATCTCAAGGAGCACTATACCAAAGCTATATACATCACCAGATGGAG 720
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AAATTTGACCACATTCAGCATATTCTGCAGTGCGTAAACGTGATAATTAAGTATTGCATG 780
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GCTCAAACCATAAGATTTATTGGAAAATAGTATTGAGTACCTGGAGCAATATATCCAATT 840
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GTTCCCATTAGCCCTACAGAACTCTTTGAATTGATCAATTGCTCTCCTTCTGGGTCAGTG 900
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGAATCTTGGCAAGGCCAAGGTCTCCAACATGCGCAACCATGTCCTCCCCAAGAAGAATG 960
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTGCTGGGCTTGAAATCACAGTGAACTATTGTTGGATGGCAGCTGTTGTGCAAATAATCT 1020
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGTGCAGCGGCGATATCAGAAGCAATGCTCAATCTCTGCACTAGTGTTAGAACTTTAACT 1080
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GGATCTGATGAGTGTACCTCCGGATGTAACCATTTATCAAGGTTTCCGTGAGGCATGAAC 1140
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTGAATACTATGGCTTTAAAGTCATTTTGATTCAAGCCAGAGCAAGAACAGCAAGTTATG 1200
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      ACACCAATCAAGTTGCGATGGCGGATTTTGCTAATTGCGTTACACTCAGCCACAAAACTT 1260
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTGGAAGAACCAGATTGTTCAAGATTGAAAACCTTGATAGCTACAGTAGTTTCCGACTTT 1320
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTGAGCAGCATTGTCCCCTTATAAACAGATCCATACCGTCCAGTGCCAACCAAATTGTTG 1380
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      ACATTGAAGCCATTCGTTGATTGAAACAGTTCATAATAGGATACTCGAGGATACATGCCA 1440
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TCTGGCAGAGGTGCTACCGTTGTTCGCATGGATGAAGGTCTTAGTTTCTTCCGTATAGAG 1500
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AAGACAACAGCTGCCAGGATAAAGCACACAAAGATTGTAACAGCAGTCGGAATAACCACT 1560
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTTTGAGTGACTAGAAGTATACTTCGACTATGTTCCATGGGTTTGGTTGGGCATGAAGGC 1620
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AAATGAAGCTCACGTATACCACCACAAAGCTTATCATTCCCATCAAACTTAAATCCTGTC 1680
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTAAATCCTGTCAAATTGGCAAACACTCCATGTGCTGGGACTTGGCCATCAAGGTTATTA 1740
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AAGGATATGTCAAGCCAATATAATGATGTCATGTTTTCCATGTTCTCTGGGATTTGTGCA 1800
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GATAGATTATTGTGTGAAAGATATAGCTCTTTCAGTCCATCCATGAGTCTTAAGTCCTGA 1860
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GGAATTGCACCAAGAAGGCTATTTTTGGTCAAATTTAGCAGTACTAATCCTCGCATTTTG 1920
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CTCACTGATACAGGAATGGTACCATTAAAGAAGTTATCGTCCAAATGAAGTTCCATCAAG 1980
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CTCTGACAGTTGCTGAGACTATTTGGTAGCAACCCAGAAAAGTTGTTACTGTACATGTAT 2040
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AAGTATGTAAGTTTTGTGAGACCACCTACTGCTGATGGAAGAGAACCGCTAAAATGATTC 2100
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CTTGACAGATCCAGAATGTACGACAAGGATGGAAGATTAAAAATATCTCCAGGTAATTGA 2160
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TCTCTAAGTTTATTGTTTGAAAAGGTTGCGATGATAAGTTGTTGCAGGTTCCCAATGCTT 2220
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GCTGGCAATGGCCCCTCCAAGCTATTGTTATCTAGAGAGAGTTGCTGCAGTTGCGTTAAG 2280
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTTCCGAGTGAGGATGGTATGATCCCAGACAATAGGTTATTTTCTAGTGTCAAGTACTGC 2340
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGTGTTTCAAGCCTTCCTATGCTGTCAGGTATCGGACCACTGAAACGATTGTTAGAGAGA 2400
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CCCAACTTAATTAGTTTGAGGAAGTTGTTAATACCATCTGGTATTTTACCTGAAATTTTG 2460
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTAAATCCGATATCCAGGAGTTCGAGCTGTGCTGATAGGTTGGTGATAGAGTTTGGCAGT 2520
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GCTCCACCAAGCCTGTTGTTTTGTATTGTCACAGCACGAAGTCTTGTGCAATTTGTCAAG 2580
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AACGTGATGAACCTCCAGTCCTTGACACTGGTTGCCTTCAGCTGGTTTCTTTGCAGCATC 2640
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGGTATTTCAGGCAGAGCATTCCAATCTCCGGAGGTATGATTCCAGTGAAGTTGTTAGAA 2700
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GAGAGGTCTATGGAGCGCATGTTGGTTGCATTTGCTATTGAAGGTGGGATGCTTCCTGTG 2760
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AAATGGTTCAAGGCAACGATGAAGTATTGGATTTTTGGTAGGCCATTGCCCAAATCAGAA 2820
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GGCAATCTTCCATGCAACTCATTCTCCTGCAGGCCAATGTGGATCAGCGAGGAAAGGTTG 2880
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGGAGTGTTCTTGGGATGGTGCCTGACAGATGATTTACTTGCAGTGCCAACCTCTCAAGA 2940
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      CTGCTGATCTTGCCAAGGGCCTCAGGGATTGGTCCAGTGAGGTGATTCTCATTGAGGAAA 3000
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      AGTTCCGACAGCGCCGAGAGGTTGCCAAGTGATTGCGGGATGATCCCGGTGAAGATGTTC 3060
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTCCCTACTGAAATGGAATTGAGCTTCAGAAAACCTCCAAACCAATCAGGGATTTTTCCG 3120
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      TTCAGGCTGTTTAAGTCAAGTTTGATGCTAGCAAGGTTAGTGCAGTTCCTTAGTTCATCA 3180
consensus_4739#1      ------------------------------------------------------------
                                                                                  

consensus_4739#0      GTGATCTCGCCTTGAAGTGAATTGTTTGACAGGTACAGGTAGGATAACTGTGGTAGCTGG 3240
consensus_4739#1      --------------------------------------TCACCATAAAGTTGATTGC-AA 21
                                                              *  ****   ** * **   

consensus_4739#0      CCAATTGTCCTAGGAATTTCACCTTGGAATGAATTGTTTGACAAGTCGAGATATGACAAC 3300
consensus_4739#1      CTAA--GATCTAGACTTCTCAAATATG--TGAGATTCCCAATGGAAGCGGATATG-TAGC 76
                      * **  *  ****   * ***  *  *  ***  *     *        ******  * *

consensus_4739#0      TTCGACAGCCAACCAATCGTCAAAGGGATTTCACCATAAAGTTGATTGCAACTAAGATCT 3360
consensus_4739#1      CATGGAGCCCAGTCGA-----GGTGAGATTCAGTGCTAATACCCTTTGC---TTATGCCT 128
                         *    ***  * *        * ****      ***      ****   * *   **

consensus_4739#0      AGACTTCTCAAATATGTGAGATTCCCAATGGAAGCGGATATGTAGCCATGGAGCCCAGTC 3420
consensus_4739#1      ATGACTGCAGATGACACCAGACCACTGACAGTAGC-------TTGTTGTTGTGTTCCATG 181
                      *    *    *  *    ***   *  *  * ***       * *   * * *  *  * 

consensus_4739#0      GAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGAT 3480
consensus_4739#1      AAGCCAGTGCATCTGACTGATGGCTTAGACCTGCCTTGAATCCTAGCAAGGCATCCAGAT 241
                       ***********************************************************

consensus_4739#0      CAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGAT 3540
consensus_4739#1      CAGTGTTATTGCTGAAAGGCAATCCTTGAGTACATGAAGCTGATGCCAGTAGGAGCAGAT 301
                      ************************************************************

consensus_4739#0      ATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTCTGGCAGCTAAA 3600
consensus_4739#1      ATGGCAAGAGAAGCAATTTTAGGGCAGTAAACATTTTGAAGCACTTTTTTGGCAGCTAAA 361
                      ************************************************ ***********

consensus_4739#0      AACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGT 3660
consensus_4739#1      AACAAAAAAGAATTAGTCTTCAATTCCATGCCCAGGTAAGTTTCACTTGGAATAATAAGT 421
                      ************************************************************

consensus_4739#0      GTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACAT 3720
consensus_4739#1      GTGCCAGAAAAAACTCCCATCGGTCACAACTCAGAAATACGCCATTTTGGACATTGACAT 481
                      ************************************************************

consensus_4739#0      GGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCA 3780
consensus_4739#1      GGTCTCCCAAATAAAACTTTGATATCTGATCTTTATATAAAATACTATTTATAAAGCTCA 541
                      ************************************************************

consensus_4739#0      TTAGTG----------------------- 3786
consensus_4739#1      TTAGTGTTATAATGCTAAAAAAAAAAAAA 570
                      ******


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)