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Oryza sativa
cluster # 4751 cluster # 4751       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4751#0 length = 1246 sequences # 3  

consensusID : consensus_4751#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1246
fasta sequence
                              [AACTGAGAGTTAAACAGAAGTCTCTGGAGAGCTTGTGGGAGAACAGGCTTCTATAGTAAAATCCCCCTCCCCGACCCCTCTTCCCCCCGATTCCGGTGGTTCGCCGCCGGTGAGGGCCGAAGGAGGGGCCAGGCCACCTTCCCGTACTAGTATAAAGTAGGTTAGGTCGGAGTTCTTCCGTAGTCAGGTCTTCCTGTAGCTCGGGTTTGTCCCTTTTGGAGTTTCGCCGGTGTTGCTTCATGGCGATCGGAGAAGACGATGGTGGCGGTGGTGTTTGTGGCCGTGGCTGTCCCAGTGTCGTCGCTGAAGATGGATGGATCTGGGGCGTTTGGCGTCCTTTCCATGGCGACAAGGGCTTGCGGTGGTGGATCTGGTGCAGCTGGCCTCTGTTCATTGCTTGCCCAGAGTGATGGAGATGGATGTGGTGTTTCTGGGCCGGCCGTCTCAGGCTCCCTGACAAGGACGGATGGTGGTGGCTGCAAGAGCTGCTGCTGCTCATGCTCGTTGGTGGGCTGAATGAGCTGCTCCAGCTTGTTAGTTGGTTGAATCTCCACATGCTTCTGCTTGTTGAAGCTCTTGGTGGCAAGCTTGTTGGTTGGTTGCTCAGGCTCCTGCTTATTGAAGCTCTCTGCGGCAACATTTTCCCTTCCATCTCCGGTGTTGCGTACCTCCGCCAAATCGTTACAAGACAGGGGTTCAGTCGCCGCCATCCTAATTCTTGCATGTTCAAGGCAAGTTGGAGTATGGAGACTTTCTTCAAATCTACTTGCAGTAGTATTCAAGTTGAGGGCTCCATTCGGGTTGAGTATAGACCGTCTAGTCGGCTCTTGTCGATAGGATTGCAGTCTGTGCTCCTCAGATTTGATGGAGAACTCCTTGACAATATTTTGTTGAGTCCGGTGAAGCTTAAGAAAAATTTACGACTCAACAACAAACCTCGAATAGCGCCGTTTCCGTGGAGGCAGCCGAAGGGGTCACCGGTCTGTCAAGCGGTGTGCGCGTCTTCAGTAGAGGCTCGTGGACGTGGTCGTCGCGGCATTACCGCAGTCCCCTGTCGATCGCGTTCTTTACTGCTGTTTGGATTATCTTGGAGGATGTTTTTCTTAGTTCAGCTAGCTTTACCTTCTGAATGGATGGTGTTGTTTTTTATGTCTTATCTTTTATGGCGATGTTCTGGGGATGCCATTTCCTTTGAGCTCTGTCTGTAATCCTCACTATATGAATAAATTTATGAGTTTTCAAAAAA]

[+] EMBL CF277187             [AACTGAGAGTTAAACAGAAGTCTCTGGAGAGCTTGTGGGAGAACAGGCTTCTATAGTAAAATCCCCCTCCCCGACCCCTCTTCCCCCCGATTCCGGTGGTTCGCCGCCGGTGAGGGCCGAAGGAGGGGCCAGGCCACCTTCCCGTACTAGTATAAAGTAGGTTAGGTCGGAGTTCTTCCGTAGTCAGGTCTTCCTGTAGCTCGGGTTTGTCCCTTTTGGAGTTTCGCCGGTGTTGCTTCATGGCGATCGGAGAAGACGATGGTGGCGGTGGTGTTTGTGGCCGTGGCTGTCCCAGTGTCGTCGCTGAAGATGGATGGATCTGGGGCGTTTGGCGTCCTTTCCATGGCGACAAGGGCTTGCGGTGGTGGATCTGGTGCAGCTGGCCTCTGTTCATTGCTTGCCCAGAGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK102041             [                                          atAGGCTTCTATAGTAAAATCCCCCTCCCCGACCCCTCTTCCCCCCGATTCCGGTGGTTCGCCGCCGGTGAGGGCCGAAGGAGGGGCCAGGCCACCTTCCCGTACTAGTATAAAGTAGGTTAGGTCGGAGTTCTTCCGTAGTCAGGTCTTCCTGTAGCTCGGGTTTGTCCCTTTTGGAGTTTCGCCGGTGTTGCTTCATGGCGATCGGAGAAGACGATGGTGGCGGTGGTGTTTGTGGCCGTGGCTGTCCCAGTGTCGTCGCTGAAGATGGATGGATCTGGGGCGTTTGGCGTCCTTTCCATGGCGACAAGGGCTTGCGGTGGTGGATCCGGTGCAGCTGGCCTCTGTTCATTGCTTGCCCAGAGTGATGGAGATGGATGTGGTGTTTCTGGGCCGGCCGTCTCAGGCTCCCTGACAAGGACGGATGGTGGTGGCTGCAAGAGCTGCTGCTGCTCATGCTCGTTGGTGGGCTGAATGAGCTGCTCCAGCTTGTTAGTTGGTTGAATCTCCACATGCTTCTGCTTGTTGAAGCTCTTGGTGGCAAGCTTGTTGGTTGGTTGCTCAGGCTCCTGCTTATTGAAGCTCTCTGCGGCAACATTTTCCCTTCCATCTCCGGTGTTGCGTACCTCCGCCAAATCGTTACAAGACAGGGGTTCAGTCGCCGCCATCCTAATTCTTGCATGTTCAAGGCAAGTTGGAGTATGGAGACTTTCTTCAAATCTACTTGCAGTAGTATTCAAGTTGAGGGCTCCATTCGGGTTGAGTATAGACCGTCTAGTCGGCTCTTGTCGATAGGATTGCAGTCTGTGCTCCTCAGATTTGATGGAGAACTCCTTGACAATATTTTGTTGAGTCCGGTGAAGCTTAAGAAAAATTTACGACTCAACAACAAACCTCGAATAGCGCCGTTTCCGTGGAGGCAGCCGAAGGGGTCACCGGTCTGTCAAGCGGTGTGCGCGTCTTCAGTAGAGGCTCGTGGACGTGGTCGTCGCGGCATTACCGCAGTCCCCTGTCGATCGCGTTCTTTACTGCTGTTTGGATTATCTTGGAGGATGTTTTTCTTAGTTCAGCTAGCTTTACCTTCTGAATGGATGGTGTTGTTTTTTATGTCTTATCTTTTATGGCGATGTTCTGGGGATGCCATTTCCTTTGAGCTCTGTCTGTAATCCTCACTATATGAATAAATTT                ]
[-] EMBL CF277188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCAAGTTGGAGTATGGAGACTTTCTTCAAATCTACTTGCAGTAGTATTCAAGTTGAGGGCTCCATTCGGGTTGAGTATAGACCGTCTAGTCGGCTCTTGTCGATAGGATTGCAGTCTGTGCTCCTCAGATTTGATGGAGAACTCCTTGACAATATTTTGTTGAGTCCGGTGAAGCTTAAGAAAAATTTACGACTCAACAACAAACCTCGAATAGCGCCGTTTCCGTGGAGGCAGCCGAAGGGGTCACCGGTCTGTCAAGCGGTGTGCGCGTCTTCAGTAGAGGCTCGTGGACGTGGTCGTCGCGGCATTACCGCAGTCCCCTGTCGATCGCGTTCTTTACTGCTGTTTGGATTATCTTGGAGGATGTTTTTCTTAGTTCAGCTAGCTTTACCTTCTGAATGGATGGTGTTGTTTTTTATGTCTTATCTTTTATGGCGATGTTCTGGGGATGCCATTTCCTTTGAGCTCTGTCTGTAATCCTCACTATATGAATAAATTTATGAGTTTTCAAAAAA]


>consensus_4751#0 AACTGAGAGTTAAACAGAAGTCTCTGGAGAGCTTGTGGGAGAACAGGCTTCTATAGTAAA ATCCCCCTCCCCGACCCCTCTTCCCCCCGATTCCGGTGGTTCGCCGCCGGTGAGGGCCGA AGGAGGGGCCAGGCCACCTTCCCGTACTAGTATAAAGTAGGTTAGGTCGGAGTTCTTCCG TAGTCAGGTCTTCCTGTAGCTCGGGTTTGTCCCTTTTGGAGTTTCGCCGGTGTTGCTTCA TGGCGATCGGAGAAGACGATGGTGGCGGTGGTGTTTGTGGCCGTGGCTGTCCCAGTGTCG TCGCTGAAGATGGATGGATCTGGGGCGTTTGGCGTCCTTTCCATGGCGACAAGGGCTTGC GGTGGTGGATCTGGTGCAGCTGGCCTCTGTTCATTGCTTGCCCAGAGTGATGGAGATGGA TGTGGTGTTTCTGGGCCGGCCGTCTCAGGCTCCCTGACAAGGACGGATGGTGGTGGCTGC AAGAGCTGCTGCTGCTCATGCTCGTTGGTGGGCTGAATGAGCTGCTCCAGCTTGTTAGTT GGTTGAATCTCCACATGCTTCTGCTTGTTGAAGCTCTTGGTGGCAAGCTTGTTGGTTGGT TGCTCAGGCTCCTGCTTATTGAAGCTCTCTGCGGCAACATTTTCCCTTCCATCTCCGGTG TTGCGTACCTCCGCCAAATCGTTACAAGACAGGGGTTCAGTCGCCGCCATCCTAATTCTT GCATGTTCAAGGCAAGTTGGAGTATGGAGACTTTCTTCAAATCTACTTGCAGTAGTATTC AAGTTGAGGGCTCCATTCGGGTTGAGTATAGACCGTCTAGTCGGCTCTTGTCGATAGGAT TGCAGTCTGTGCTCCTCAGATTTGATGGAGAACTCCTTGACAATATTTTGTTGAGTCCGG TGAAGCTTAAGAAAAATTTACGACTCAACAACAAACCTCGAATAGCGCCGTTTCCGTGGA GGCAGCCGAAGGGGTCACCGGTCTGTCAAGCGGTGTGCGCGTCTTCAGTAGAGGCTCGTG GACGTGGTCGTCGCGGCATTACCGCAGTCCCCTGTCGATCGCGTTCTTTACTGCTGTTTG GATTATCTTGGAGGATGTTTTTCTTAGTTCAGCTAGCTTTACCTTCTGAATGGATGGTGT TGTTTTTTATGTCTTATCTTTTATGGCGATGTTCTGGGGATGCCATTTCCTTTGAGCTCT GTCTGTAATCCTCACTATATGAATAAATTTATGAGTTTTCAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)