cluster # 4763

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Oryza sativa
cluster # 4763 cluster # 4763 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4763#0 length = 548 sequences # 3

consensusID : consensus_4763#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 548
fasta sequence

                              [AACATTCCAGGGACTGATGAAGGATCAGTTT-GC-ATTATGTTGTACAGAGAATCCTTCAGACATGTGATGAC-AATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT-CATTACAGGAGAAAA--CCGAGT-GCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGT-CACT-AAGCTGTACAGAT-GTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAAGCAAAGCGTGTCGTTTAAAAAAA]

[+] EMBL BI808655             [AACATTCCAGGGACTGATGAAGGATCAGTTT GC ATTATGTTGTACAGAGAATCCTTCAGACATGTGATGAC AATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT CATTACAGGAGAAAA  CCGAGT GCGGATGGGGTCCAAGACTAGCC ATGTCAGCAGT CACT AAGCTGTACAGAT GTTGACGCTAATCCTTTTTAAGCATTGGCATC ATAAGGAAATCTGGTGAATTGAC AATGTGGAGATTTTTGTTTTGAGATAC CTGTAATAGCC ATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAA                       ]
[+] EMBL OS0820A              [                       ATCAGTTTGGCAATTATGTTGTACAGAGAATCCTTCAGACATGTGATGACAAATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAAT CATTACAGGAGAAAA  CCGAGT GCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGT CACT AAGCTGTACAGAT GTTGACGCTAATCCTTTTTAAGCATNGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTG                                                                                                                                                                                 ]
[+] EMBL C98156               [                                                                                                                                                                          TAATCCATTACAGGAGAAAAACCCGAGTNCCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGTCCACTAAAGCTGTACAGATGGTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAGTTGGCAAAGCGTGTCGTTTAAAAAAA]




>consensus_4763#0
AACATTCCAGGGACTGATGAAGGATCAGTTTGCATTATGTTGTACAGAGAATCCTTCAGA
CATGTGATGACAATTCCTAGTTGTGATCCTCTCAAGCATCAAGATGCATTTGAACGAACT
GAAGAACTACACTTTCGGGAAGCATATAGTTGCGCGTGTGGAGAAGTTAATCATTACAGG
AGAAAACCGAGTGCGGATGGGGTCCAAGACTAGCCAATGTCAGCAGTCACTAAGCTGTAC
AGATGTTGACGCTAATCCTTTTTAAGCATTGGCATCAATAAGCAAATCTGGTGAATTGAC
AAATGTGGAGATTTTTGTTTTGAGATACACTGTAATAGCCAATAGGGGTGTCCTGGTGGA
GACTGGATGTGTTCTCTTCTTTTTTACTGTGGCCTGTATAGATCTCTCCGGGTACTTAAA
AGGTAATTAGATGAGTGTTAGGTATCGCCGCTGTAAATCTGTTTTTTGGCCATGTACAAG
TTTACTGATGGGTATCAGCTGTACATTTGTTTGAGCTGTCAAAAAGCAAAGCGTGTCGTT
TAAAAAAA

clustalw multiple alignements is not computed in this case