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Oryza sativa
cluster # 4794 cluster # 4794       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4794#0 length = 3713 sequences # 2  
 consensus_4794#1 length = 486 sequences # 1  
consensusID : consensus_4794#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3713
fasta sequence 
                              [CGAAGCATATGCCAAGATGGGGTTGACTACCCAAGCCTTTACCCCAGCACCAGCATCGCTCCGAGGATTCGGCGGAGAAGCAGTTCAAGTTCTCGGCCAAGCACAGTTGATGGTAGCCTTCGGCACGGGGGAAAACAGACGCGCAGAGCAAGTATTGTTTGACATTGTCGACATCCCATACAACTAAAATGCCATCTTCGGCCGTGCAACGTTGAACAAGTTCGAAGCCATTTCTCATCACAATTATCTCAAGCTCAAGATGCCCGGCCCGGCAGGAGTGATCGTGGTCAAGGGGCTTCAGCCTTTGGCTGCTTCAAAAGGAGATCTGGCCATAATCAACAGAGCAGTGCACAATGTTGAGGCCGAACCGCATGACCGGGCGAAGCATGTGCCAAAGCCCGCCCCTCACAGCAAGATAATCAAGATATAGATTGATGATGCCGACCCCGCAAAGCTCGTATCGTTGGGGGGCGACATGGGCAAAGAAGAAGCTGAGAACATCCTAGAGGCACTCAAGAAGAACATTGATATCTTTGCCTGGGGCTCTGATGAAGTGGGAGGTGTTTCGACAGATCTCATCATGCATCACCTGGCAGTCAAGCCAGATGCTAAGCCAAGGAAACAGAAGCTACGCAAGATGTCTGCTGATCGCCAACAGGCAGCAAAAGCCGAAGTCCAAAAATTGCTCAAGGCTGGAGTCATTCAAGAGATCGACCATCCTGAGTGGCTGGCGAATCCAGTGCTTGTGCGGAAGTCAAACGGAAAATGGCGCATGTGTGTCGACTTCACAGACCTAAACAAAGCATGTCCGAAGGACGATTTCCTCTTGCCACGGATCGACCAGCTTGTGGATTTGACAGCTAGCTGCGAACTCATGAGCTTCCTGGATGCATATTCCGGCTATCACCAGATCCACATGAACCCGGCAGACATCCCCAAGACAGCCTTCATCACACCATTTGGCACCTTTTGTCACCTCAGGATGCCTTTTGGCCTGAGGAATGCCGGAGCAACCTTCGCGAGGCTGGTGTACAAGGTCCTTTACAAGCAGTCGGGGCGAAATGTGGAGGCTTATGTCGACGATGTCGTCGTAAAAAGCCGCAAGGCTTTCGACCACGCGTCCGACTTGCAGGAGACCTTCGACAACTTGCGCGCGGCGGGTACGAAACTGAATCCTGAGAAGTGCGTTTTCGGTGTTCGCGCCGGCAAGTTGTTGGGTTTCCTAGTTTCTGAAAGAGGCATCGAGGCGAATCCCGAGAAAATTGATGCCATTCAGCAAATGAAGCCTCCGTTGAGCGTACGTGAAGTACAAAAGCTCGCAGGCCGAATTGCGGCACTCAATCGATTCCTCTCAAAGGCAGCCGAAAGAGGTTTGCCCTTCTTCAAGACCCTCCGGGGCGTGGAAAAATTCCACTGGACACCCGAATGCCAAGCAGCGTTCGGCGAGCTGAAGCAATACCTACAAAGCCCGCCAGCTCTGATCAGCCTAGCACCAGGAAGCGAACTGCTACTATACCTGGCAGCTTCGCCAGTGGCAGTCAGTGCTGCCCTTGTCCAAGAAATAGATTCAGGGCAGAAACCGGTCTATTTCATCTCCAAAGCATTGCAAGGAGCGAAGACAAGATACATTGAAATGGAAAAGCTCGCTTATGCCCTGGTGATGGCTCCGTGCAAGCTTAAGCATTACTTCCAGACCCACAAAGTCATAGTGCCATCGCAGTACCCTTTGGGCGAAATACTCTGGGGCAAAGAAGTTACCGGCCGGCTTAGCAAGTGGGCAGCAGAGCTATCCCCTTTTGACTTGCATTTTGTTGCCCGCACTGCTATCAAGTCCCAAGTGCTAGCTGACTTCGTGGCCGAATGGACACCGGCACTCGCCCCCGAGCCCGAGCCCGTCAAACAGCCCTGGGTGATGTACTCTGACGGTTCGTGGTCGCACAAGGGGGCGGGCATTGCGGCAGTGCTCATTTCGCCAAGTGGTGTGCCGATTCGGTATGCCGCAAGGCTGCAGTTCGACACGACCAACAACGCAGCAGAATACGAAGCCATTCTTCTGGGCCTAAGAAAGGCGAAAGCATTAGGGGTTCGGCGCTTGCTAATCCGAACCGACTCTAAGCTGGTGGCGGGCCATGTCGACAAGTCCTTTGAGGCAAAAGAAGAAGGAATGAAGAGGTATTTGGAGGTCGTTCGGTCTATGGAAAAGTGTTTCACCGGCATAACGGTCGAACATTTACCTAGAGGCCAGAACGAGGAAGCACACCTTGGCAAAATCTGCTGCTTGTGGTGGACCGCATTCGCCTGGCACCTTTTTTGAAGTCCTGTTTGCACCAAGCGTGCCTGTGGAGAGCTTGGAGGTCATGGCAATCGACTAGGAGAAACTGGGCGAAGATCCATACGACTGGCGAACCCCGTTCGTAAAACACCTTGAAACTGGCTGGCTTCCGGAAGACGAAGCAGAAGCAAAGCGCCTGCAACTCAGAGTCACAAAATATAAGATGGTCTCAGGCCAGCTCTATCGCTCCGGGGTACTTCAACCCTTGCTTCGCTGCATCTCTTTTGCCGAAGGCGAGGAAATGGCCAGGGAGATACACCAGGGGCTATGTGGCGCACACCAAGCCGCAAGAACAGTTGCTTCCAAAGTGTTTAGACAAGGAGTTTACTGGCCCACTGTGTTGAAAGTCTGTGTTGAGCAAGTCAAGAAGTGCGAAAGCTGCCAGCGCCATGGCCGAAGCCAAACATCGCCCCAGTATGAGTTGCAGCCCATCGCACCAATCTGGCCCTTCGCCAGATGGGGACTGGACATCATTGGGCTGTTCCCGGTGGCGTGAAACGGGTACAAGTTCGCAATTGTGGCCGTCGAGTACTTCTCTCAATGGATTGAGGCCGAACCCCTCGGAGCGATCACTTCGGCAGCAGTACAGAAGTTTGTATGGAAAAACATTGTTTGCCGTTTTGGGGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAATTCGACTCTGACAAGTTCAGAGAAATGTGCGAAGGGCTTAACCTGGAAATCAGGTTCGCATCGGTCGCGCACCCACAGTCAAATGGGGCGGCTGAACACACAAACGGTAAGATCCTAGAAGCACTAAA-AAAAGGCTTGAGGGGGCAGCGAAGGGCAAATGGCCAGAGGAGATGCTATCTGTTCTCTGGGCCCTTCGAACGACCCCCACAAGACCAACCAAGTTCAGCCCGTTCATGCTTATTTATGGCGATGAGGCAATGACCCCGACAGAGCTAGGGGCTAACTCACCAA-GGGTGATGTTCTCTGGGGACGAAGAGGGGCGCGAGGTGTCGCTCGAACTCTTGGAGGGGGTAAGAGTCGAAGCACTCGAGCACATACGCAAGTACGCCACAGGCACTTCGGCAACTTACAACAAAAAAGTTCGA-CCGATGGAGCTGTTGCCTGGTCATCTTGTCCTAAGGAAGAAGGCGAACCCGGTAGCCGTTGGCAAGCTTGAATCGAAGTGGGAAGGACCGTACCTCATCAAGCACAAGTCCCGGATGGGGTCCTTTCGACTGGCGACACTGGAAGGCGAAGAGTTCGACCATTCCTGGAACACTGTCTCTTTCAAGCATTTCTATGTCTAGAACGGGTGGCACCCAAATCGCCAACTTGTAAAAATGTATATATCATTATGTAAGCCCTTCAGCACAATGTAAGCCCTTCGGCACTATGTAAGCC]

[+] EMBL AK110112             [CGAAGCATATGCCAAGATGGGGTTGACTACCCAAGCCTTTACCCCAGCACCAGCATCGCTCCGAGGATTCGGCGGAGAAGCAGTTCAAGTTCTCGGCCAAGCACAGTTGATGGTAGCCTTCGGCACGGGGGAAAACAGACGCGCAGAGCAAGTATTGTTTGACATTGTCGACATCCCATACAACTAAAATGCCATCTTCGGCCGTGCAACGTTGAACAAGTTCGAAGCCATTTCTCATCACAATTATCTCAAGCTCAAGATGCCCGGCCCGGCAGGAGTGATCGTGGTCAAGGGGCTTCAGCCTTTGGCTGCTTCAAAAGGAGATCTGGCCATAATCAACAGAGCAGTGCACAATGTTGAGGCCGAACCGCATGACCGGGCGAAGCATGTGCCAAAGCCCGCCCCTCACAGCAAGATAATCAAGATATAGATTGATGATGCCGACCCCGCAAAGCTCGTATCGTTGGGGGGCGACATGGGCAAAGAAGAAGCTGAGAACATCCTAGAGGCACTCAAGAAGAACATTGATATCTTTGCCTGGGGCTCTGATGAAGTGGGAGGTGTTTCGACAGATCTCATCATGCATCACCTGGCAGTCAAGCCAGATGCTAAGCCAAGGAAACAGAAGCTACGCAAGATGTCTGCTGATCGCCAACAGGCAGCAAAAGCCGAAGTCCAAAAATTGCTCAAGGCTGGAGTCATTCAAGAGATCGACCATCCTGAGTGGCTGGCGAATCCAGTGCTTGTGCGGAAGTCAAACGGAAAATGGCGCATGTGTGTCGACTTCACAGACCTAAACAAAGCATGTCCGAAGGACGATTTCCTCTTGCCACGGATCGACCAGCTTGTGGATTTGACAGCTAGCTGCGAACTCATGAGCTTCCTGGATGCATATTCCGGCTATCACCAGATCCACATGAACCCGGCAGACATCCCCAAGACAGCCTTCATCACACCATTTGGCACCTTTTGTCACCTCAGGATGCCTTTTGGCCTGAGGAATGCCGGAGCAACCTTCGCGAGGCTGGTGTACAAGGTCCTTTACAAGCAGTCGGGGCGAAATGTGGAGGCTTATGTCGACGATGTCGTCGTAAAAAGCCGCAAGGCTTTCGACCACGCGTCCGACTTGCAGGAGACCTTCGACAACTTGCGCGCGGCGGGTACGAAACTGAATCCTGAGAAGTGCGTTTTCGGTGTTCGCGCCGGCAAGTTGTTGGGTTTCCTAGTTTCTGAAAGAGGCATCGAGGCGAATCCCGAGAAAATTGATGCCATTCAGCAAATGAAGCCTCCGTTGAGCGTACGTGAAGTACAAAAGCTCGCAGGCCGAATTGCGGCACTCAATCGATTCCTCTCAAAGGCAGCCGAAAGAGGTTTGCCCTTCTTCAAGACCCTCCGGGGCGTGGAAAAATTCCACTGGACACCCGAATGCCAAGCAGCGTTCGGCGAGCTGAAGCAATACCTACAAAGCCCGCCAGCTCTGATCAGCCTAGCACCAGGAAGCGAACTGCTACTATACCTGGCAGCTTCGCCAGTGGCAGTCAGTGCTGCCCTTGTCCAAGAAATAGATTCAGGGCAGAAACCGGTCTATTTCATCTCCAAAGCATTGCAAGGAGCGAAGACAAGATACATTGAAATGGAAAAGCTCGCTTATGCCCTGGTGATGGCTCCGTGCAAGCTTAAGCATTACTTCCAGACCCACAAAGTCATAGTGCCATCGCAGTACCCTTTGGGCGAAATACTCTGGGGCAAAGAAGTTACCGGCCGGCTTAGCAAGTGGGCAGCAGAGCTATCCCCTTTTGACTTGCATTTTGTTGCCCGCACTGCTATCAAGTCCCAAGTGCTAGCTGACTTCGTGGCCGAATGGACACCGGCACTCGCCCCCGAGCCCGAGCCCGTCAAACAGCCCTGGGTGATGTACTCTGACGGTTCGTGGTCGCACAAGGGGGCGGGCATTGCGGCAGTGCTCATTTCGCCAAGTGGTGTGCCGATTCGGTATGCCGCAAGGCTGCAGTTCGACACGACCAACAACGCAGCAGAATACGAAGCCATTCTTCTGGGCCTAAGAAAGGCGAAAGCATTAGGGGTTCGGCGCTTGCTAATCCGAACCGACTCTAAGCTGGTGGCGGGCCATGTCGACAAGTCCTTTGAGGCAAAAGAAGAAGGAATGAAGAGGTATTTGGAGGTCGTTCGGTCTATGGAAAAGTGTTTCACCGGCATAACGGTCGAACATTTACCTAGAGGCCAGAACGAGGAAGCACACCTTGGCAAAATCTGCTGCTTGTGGTGGACCGCATTCGCCTGGCACCTTTTTTGAAGTCCTGTTTGCACCAAGCGTGCCTGTGGAGAGCTTGGAGGTCATGGCAATCGACTAGGAGAAACTGGGCGAAGATCCATACGACTGGCGAACCCCGTTCGTAAAACACCTTGAAACTGGCTGGCTTCCGGAAGACGAAGCAGAAGCAAAGCGCCTGCAACTCAGAGTCACAAAATATAAGATGGTCTCAGGCCAGCTCTATCGCTCCGGGGTACTTCAACCCTTGCTTCGCTGCATCTCTTTTGCCGAAGGCGAGGAAATGGCCAGGGAGATACACCAGGGGCTATGTGGCGCACACCAAGCCGCAAGAACAGTTGCTTCCAAAGTGTTTAGACAAGGAGTTTACTGGCCCACTGTGTTGAAAGTCTGTGTTGAGCAAGTCAAGAAGTGCGAAAGCTGCCAGCGCCATGGCCGAAGCCAAACATCGCCCCAGTATGAGTTGCAGCCCATCGCACCAATCTGGCCCTTCGCCAGATGGGGACTGGACATCATTGGGCTGTTCCCGGTGGCGTGAAACGGGTACAAGTTCGCAATTGTGGCCGTCGAGTACTTCTCTCAATGGATTGAGGCCGAACCCCTCGGAGCGATCACTTCGGCAGCAGTACAGAAGTTTGTATGGAAAAACATTGTTTGCCGTTTTGGGGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAATTCGACTCTGACAAGTTCAGAGAAATGTGCGAAGGGCTTAACCTGGAAATCAGGTTCGCATCGGTCGCGCACCCACAGTCAAATGGGGCGGCTGAACACACAAACGGTAAGATCCTAGAAGCACTAAA AAAAGGCTTGAGGGGGCAGCGAAGGGCAAATGGCCAGAGGAGATGCTATCTGTTCTCTGGGCCCTTCGAACGACCCCCACAAGACCAACCAAGTTCAGCCCGTTCATGCTTATTTATGGCGATGAGGCAATGACCCCGACAGAGCTAGGGGCTAACTCACCAA GGGTGATGTTCTCTGGGGACGAAGAGGGGCGCGAGGTGTCGCTCGAACTCTTGGAGGGGGTAAGAGTCGAAGCACTCGAGCACATACGCAAGTACGCCACAGGCACTTCGGCAACTTACAACAAAAAAGTTCGA CCGATGGAGCTGTTGCCTGGTCATCTTGTCCTAAGGAAGAAGGCGAACCCGGTAGCCGTTGGCAAGCTTGAATCGAAGTGGGAAGGACCGTACCTCATCAAGCACAAGTCCCGGATGGGGTCCTTTCGACTGGCGACACTGGAAGGCGAAGAGTTCGACCATTCCTGGAACACTGTCTCTTTCAAGCATTTCTATGTCTAGAACGGGTGGCACCCAAATCGCCAACTTGTAAAAATGTATATATCATTATGTAAGCCCTTCAGCACAATGTAAGCCCTTCGGCACTATGTAAGCC]
[+] EMBL CF323657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCGTTTCGGAGTGCCAAAAGATTTCATCACTGACAACGGCAAGCAGTTCGACTCTGACAAGTTCAGAGAAATGTGCGAAGGGCTTAACTTGGAAATCATGTTCGTGTCGGTTGCGCACCCGCAGTCAAATGGGGCGGCCGAATATACAAATGGTAAGATCCTAGAAGCACTAAAGAAAAGGCTTGAGGGGGCAGCGAAGGGCAAATGGCCAGAGGAAATGCTATCTGTTCTCTGAGCCCTTCGGACGACCCCCACAAGACCAACCAAGTTCAGCCAGTTCATGCTTCTTTATGGCGATGAGGCAATGACCCTGACAGAGCTAGGGGCTAACTCACCAAGGGGTGACGTTCTCTGGGGGCGAAGAGGGGCGCGAGGTGTCGCCCGAACTCTTGGAGGGGGTAAGAGTCGAAGCACTTGAGCACATGCGCAAGTATGCCACAGGCACTTCGGCAACTTATAACAAAAAAGTTCGACCCGACGGAGCTGTTGCCTGGTt                                                                                                                                                                                                                                                                                 ]




>consensus_4794#0
CGAAGCATATGCCAAGATGGGGTTGACTACCCAAGCCTTTACCCCAGCACCAGCATCGCT
CCGAGGATTCGGCGGAGAAGCAGTTCAAGTTCTCGGCCAAGCACAGTTGATGGTAGCCTT
CGGCACGGGGGAAAACAGACGCGCAGAGCAAGTATTGTTTGACATTGTCGACATCCCATA
CAACTAAAATGCCATCTTCGGCCGTGCAACGTTGAACAAGTTCGAAGCCATTTCTCATCA
CAATTATCTCAAGCTCAAGATGCCCGGCCCGGCAGGAGTGATCGTGGTCAAGGGGCTTCA
GCCTTTGGCTGCTTCAAAAGGAGATCTGGCCATAATCAACAGAGCAGTGCACAATGTTGA
GGCCGAACCGCATGACCGGGCGAAGCATGTGCCAAAGCCCGCCCCTCACAGCAAGATAAT
CAAGATATAGATTGATGATGCCGACCCCGCAAAGCTCGTATCGTTGGGGGGCGACATGGG
CAAAGAAGAAGCTGAGAACATCCTAGAGGCACTCAAGAAGAACATTGATATCTTTGCCTG
GGGCTCTGATGAAGTGGGAGGTGTTTCGACAGATCTCATCATGCATCACCTGGCAGTCAA
GCCAGATGCTAAGCCAAGGAAACAGAAGCTACGCAAGATGTCTGCTGATCGCCAACAGGC
AGCAAAAGCCGAAGTCCAAAAATTGCTCAAGGCTGGAGTCATTCAAGAGATCGACCATCC
TGAGTGGCTGGCGAATCCAGTGCTTGTGCGGAAGTCAAACGGAAAATGGCGCATGTGTGT
CGACTTCACAGACCTAAACAAAGCATGTCCGAAGGACGATTTCCTCTTGCCACGGATCGA
CCAGCTTGTGGATTTGACAGCTAGCTGCGAACTCATGAGCTTCCTGGATGCATATTCCGG
CTATCACCAGATCCACATGAACCCGGCAGACATCCCCAAGACAGCCTTCATCACACCATT
TGGCACCTTTTGTCACCTCAGGATGCCTTTTGGCCTGAGGAATGCCGGAGCAACCTTCGC
GAGGCTGGTGTACAAGGTCCTTTACAAGCAGTCGGGGCGAAATGTGGAGGCTTATGTCGA
CGATGTCGTCGTAAAAAGCCGCAAGGCTTTCGACCACGCGTCCGACTTGCAGGAGACCTT
CGACAACTTGCGCGCGGCGGGTACGAAACTGAATCCTGAGAAGTGCGTTTTCGGTGTTCG
CGCCGGCAAGTTGTTGGGTTTCCTAGTTTCTGAAAGAGGCATCGAGGCGAATCCCGAGAA
AATTGATGCCATTCAGCAAATGAAGCCTCCGTTGAGCGTACGTGAAGTACAAAAGCTCGC
AGGCCGAATTGCGGCACTCAATCGATTCCTCTCAAAGGCAGCCGAAAGAGGTTTGCCCTT
CTTCAAGACCCTCCGGGGCGTGGAAAAATTCCACTGGACACCCGAATGCCAAGCAGCGTT
CGGCGAGCTGAAGCAATACCTACAAAGCCCGCCAGCTCTGATCAGCCTAGCACCAGGAAG
CGAACTGCTACTATACCTGGCAGCTTCGCCAGTGGCAGTCAGTGCTGCCCTTGTCCAAGA
AATAGATTCAGGGCAGAAACCGGTCTATTTCATCTCCAAAGCATTGCAAGGAGCGAAGAC
AAGATACATTGAAATGGAAAAGCTCGCTTATGCCCTGGTGATGGCTCCGTGCAAGCTTAA
GCATTACTTCCAGACCCACAAAGTCATAGTGCCATCGCAGTACCCTTTGGGCGAAATACT
CTGGGGCAAAGAAGTTACCGGCCGGCTTAGCAAGTGGGCAGCAGAGCTATCCCCTTTTGA
CTTGCATTTTGTTGCCCGCACTGCTATCAAGTCCCAAGTGCTAGCTGACTTCGTGGCCGA
ATGGACACCGGCACTCGCCCCCGAGCCCGAGCCCGTCAAACAGCCCTGGGTGATGTACTC
TGACGGTTCGTGGTCGCACAAGGGGGCGGGCATTGCGGCAGTGCTCATTTCGCCAAGTGG
TGTGCCGATTCGGTATGCCGCAAGGCTGCAGTTCGACACGACCAACAACGCAGCAGAATA
CGAAGCCATTCTTCTGGGCCTAAGAAAGGCGAAAGCATTAGGGGTTCGGCGCTTGCTAAT
CCGAACCGACTCTAAGCTGGTGGCGGGCCATGTCGACAAGTCCTTTGAGGCAAAAGAAGA
AGGAATGAAGAGGTATTTGGAGGTCGTTCGGTCTATGGAAAAGTGTTTCACCGGCATAAC
GGTCGAACATTTACCTAGAGGCCAGAACGAGGAAGCACACCTTGGCAAAATCTGCTGCTT
GTGGTGGACCGCATTCGCCTGGCACCTTTTTTGAAGTCCTGTTTGCACCAAGCGTGCCTG
TGGAGAGCTTGGAGGTCATGGCAATCGACTAGGAGAAACTGGGCGAAGATCCATACGACT
GGCGAACCCCGTTCGTAAAACACCTTGAAACTGGCTGGCTTCCGGAAGACGAAGCAGAAG
CAAAGCGCCTGCAACTCAGAGTCACAAAATATAAGATGGTCTCAGGCCAGCTCTATCGCT
CCGGGGTACTTCAACCCTTGCTTCGCTGCATCTCTTTTGCCGAAGGCGAGGAAATGGCCA
GGGAGATACACCAGGGGCTATGTGGCGCACACCAAGCCGCAAGAACAGTTGCTTCCAAAG
TGTTTAGACAAGGAGTTTACTGGCCCACTGTGTTGAAAGTCTGTGTTGAGCAAGTCAAGA
AGTGCGAAAGCTGCCAGCGCCATGGCCGAAGCCAAACATCGCCCCAGTATGAGTTGCAGC
CCATCGCACCAATCTGGCCCTTCGCCAGATGGGGACTGGACATCATTGGGCTGTTCCCGG
TGGCGTGAAACGGGTACAAGTTCGCAATTGTGGCCGTCGAGTACTTCTCTCAATGGATTG
AGGCCGAACCCCTCGGAGCGATCACTTCGGCAGCAGTACAGAAGTTTGTATGGAAAAACA
TTGTTTGCCGTTTTGGGGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAATTCGACT
CTGACAAGTTCAGAGAAATGTGCGAAGGGCTTAACCTGGAAATCAGGTTCGCATCGGTCG
CGCACCCACAGTCAAATGGGGCGGCTGAACACACAAACGGTAAGATCCTAGAAGCACTAA
AAAAAGGCTTGAGGGGGCAGCGAAGGGCAAATGGCCAGAGGAGATGCTATCTGTTCTCTG
GGCCCTTCGAACGACCCCCACAAGACCAACCAAGTTCAGCCCGTTCATGCTTATTTATGG
CGATGAGGCAATGACCCCGACAGAGCTAGGGGCTAACTCACCAAGGGTGATGTTCTCTGG
GGACGAAGAGGGGCGCGAGGTGTCGCTCGAACTCTTGGAGGGGGTAAGAGTCGAAGCACT
CGAGCACATACGCAAGTACGCCACAGGCACTTCGGCAACTTACAACAAAAAAGTTCGACC
GATGGAGCTGTTGCCTGGTCATCTTGTCCTAAGGAAGAAGGCGAACCCGGTAGCCGTTGG
CAAGCTTGAATCGAAGTGGGAAGGACCGTACCTCATCAAGCACAAGTCCCGGATGGGGTC
CTTTCGACTGGCGACACTGGAAGGCGAAGAGTTCGACCATTCCTGGAACACTGTCTCTTT
CAAGCATTTCTATGTCTAGAACGGGTGGCACCCAAATCGCCAACTTGTAAAAATGTATAT
ATCATTATGTAAGCCCTTCAGCACAATGTAAGCCCTTCGGCACTATGTAAGCC

consensusID : consensus_4794#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 486
fasta sequence 
                              [AAGTTGCCAACGTCATGGCCGAAGCCAAACCGTGCCCCACTATGATTTGCAGCCCATTGCGCCAATCTGGCCCTTTACCAGATGGGGACTGGACATCATTGGGCCGTTCCCGGTGGCGCGAAACGGGTATAAGTTCGTAATTGTGGCTGTGGAATATTTCTCTCGGTGGATCGAGGCCGAACCCCTCGGAGCAATCACTTCGGCAACAGTACAGAAGTTTGTTAGGAAAAACATAATCTGCCGTTTCGGAGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAGTTCGACTCTGACAAGTTCAGAGAGATGTGCGAAGGACTTAACCTGCAAATCAGGTTCGCGTCGGTCGCACACCCGCAGTCAAATGGGGCGGCCGAATGTACAAATGGCAAGATCCTAGAAGCACTAAAGAAAAGGCTCGAGGGGGCAGCGAAGGGTAAATGGCTCGAGGAAATGTTATCTGTTCTCTGGGCCCTTCGGAC]

[+] EMBL CK085076             [AAGTTGCCAACGTCATGGCCGAAGCCAAACCGTGCCCCACTATGATTTGCAGCCCATTGCGCCAATCTGGCCCTTTACCAGATGGGGACTGGACATCATTGGGCCGTTCCCGGTGGCGCGAAACGGGTATAAGTTCGTAATTGTGGCTGTGGAATATTTCTCTCGGTGGATCGAGGCCGAACCCCTCGGAGCAATCACTTCGGCAACAGTACAGAAGTTTGTTAGGAAAAACATAATCTGCCGTTTCGGAGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAGTTCGACTCTGACAAGTTCAGAGAGATGTGCGAAGGACTTAACCTGCAAATCAGGTTCGCGTCGGTCGCACACCCGCAGTCAAATGGGGCGGCCGAATGTACAAATGGCAAGATCCTAGAAGCACTAAAGAAAAGGCTCGAGGGGGCAGCGAAGGGTAAATGGCTCGAGGAAATGTTATCTGTTCTCTGGGCCCTTCGGAC]




>consensus_4794#1
AAGTTGCCAACGTCATGGCCGAAGCCAAACCGTGCCCCACTATGATTTGCAGCCCATTGC
GCCAATCTGGCCCTTTACCAGATGGGGACTGGACATCATTGGGCCGTTCCCGGTGGCGCG
AAACGGGTATAAGTTCGTAATTGTGGCTGTGGAATATTTCTCTCGGTGGATCGAGGCCGA
ACCCCTCGGAGCAATCACTTCGGCAACAGTACAGAAGTTTGTTAGGAAAAACATAATCTG
CCGTTTCGGAGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAGTTCGACTCTGACAA
GTTCAGAGAGATGTGCGAAGGACTTAACCTGCAAATCAGGTTCGCGTCGGTCGCACACCC
GCAGTCAAATGGGGCGGCCGAATGTACAAATGGCAAGATCCTAGAAGCACTAAAGAAAAG
GCTCGAGGGGGCAGCGAAGGGTAAATGGCTCGAGGAAATGTTATCTGTTCTCTGGGCCCT
TCGGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4794#0      CGAAGCATATGCCAAGATGGGGTTGACTACCCAAGCCTTTACCCCAGCACCAGCATCGCT 60
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CCGAGGATTCGGCGGAGAAGCAGTTCAAGTTCTCGGCCAAGCACAGTTGATGGTAGCCTT 120
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGGCACGGGGGAAAACAGACGCGCAGAGCAAGTATTGTTTGACATTGTCGACATCCCATA 180
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CAACTAAAATGCCATCTTCGGCCGTGCAACGTTGAACAAGTTCGAAGCCATTTCTCATCA 240
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CAATTATCTCAAGCTCAAGATGCCCGGCCCGGCAGGAGTGATCGTGGTCAAGGGGCTTCA 300
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GCCTTTGGCTGCTTCAAAAGGAGATCTGGCCATAATCAACAGAGCAGTGCACAATGTTGA 360
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GGCCGAACCGCATGACCGGGCGAAGCATGTGCCAAAGCCCGCCCCTCACAGCAAGATAAT 420
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CAAGATATAGATTGATGATGCCGACCCCGCAAAGCTCGTATCGTTGGGGGGCGACATGGG 480
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CAAAGAAGAAGCTGAGAACATCCTAGAGGCACTCAAGAAGAACATTGATATCTTTGCCTG 540
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GGGCTCTGATGAAGTGGGAGGTGTTTCGACAGATCTCATCATGCATCACCTGGCAGTCAA 600
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GCCAGATGCTAAGCCAAGGAAACAGAAGCTACGCAAGATGTCTGCTGATCGCCAACAGGC 660
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AGCAAAAGCCGAAGTCCAAAAATTGCTCAAGGCTGGAGTCATTCAAGAGATCGACCATCC 720
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TGAGTGGCTGGCGAATCCAGTGCTTGTGCGGAAGTCAAACGGAAAATGGCGCATGTGTGT 780
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGACTTCACAGACCTAAACAAAGCATGTCCGAAGGACGATTTCCTCTTGCCACGGATCGA 840
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CCAGCTTGTGGATTTGACAGCTAGCTGCGAACTCATGAGCTTCCTGGATGCATATTCCGG 900
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CTATCACCAGATCCACATGAACCCGGCAGACATCCCCAAGACAGCCTTCATCACACCATT 960
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TGGCACCTTTTGTCACCTCAGGATGCCTTTTGGCCTGAGGAATGCCGGAGCAACCTTCGC 1020
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GAGGCTGGTGTACAAGGTCCTTTACAAGCAGTCGGGGCGAAATGTGGAGGCTTATGTCGA 1080
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGATGTCGTCGTAAAAAGCCGCAAGGCTTTCGACCACGCGTCCGACTTGCAGGAGACCTT 1140
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGACAACTTGCGCGCGGCGGGTACGAAACTGAATCCTGAGAAGTGCGTTTTCGGTGTTCG 1200
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGCCGGCAAGTTGTTGGGTTTCCTAGTTTCTGAAAGAGGCATCGAGGCGAATCCCGAGAA 1260
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AATTGATGCCATTCAGCAAATGAAGCCTCCGTTGAGCGTACGTGAAGTACAAAAGCTCGC 1320
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AGGCCGAATTGCGGCACTCAATCGATTCCTCTCAAAGGCAGCCGAAAGAGGTTTGCCCTT 1380
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CTTCAAGACCCTCCGGGGCGTGGAAAAATTCCACTGGACACCCGAATGCCAAGCAGCGTT 1440
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGGCGAGCTGAAGCAATACCTACAAAGCCCGCCAGCTCTGATCAGCCTAGCACCAGGAAG 1500
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGAACTGCTACTATACCTGGCAGCTTCGCCAGTGGCAGTCAGTGCTGCCCTTGTCCAAGA 1560
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AATAGATTCAGGGCAGAAACCGGTCTATTTCATCTCCAAAGCATTGCAAGGAGCGAAGAC 1620
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AAGATACATTGAAATGGAAAAGCTCGCTTATGCCCTGGTGATGGCTCCGTGCAAGCTTAA 1680
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GCATTACTTCCAGACCCACAAAGTCATAGTGCCATCGCAGTACCCTTTGGGCGAAATACT 1740
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CTGGGGCAAAGAAGTTACCGGCCGGCTTAGCAAGTGGGCAGCAGAGCTATCCCCTTTTGA 1800
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CTTGCATTTTGTTGCCCGCACTGCTATCAAGTCCCAAGTGCTAGCTGACTTCGTGGCCGA 1860
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      ATGGACACCGGCACTCGCCCCCGAGCCCGAGCCCGTCAAACAGCCCTGGGTGATGTACTC 1920
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TGACGGTTCGTGGTCGCACAAGGGGGCGGGCATTGCGGCAGTGCTCATTTCGCCAAGTGG 1980
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TGTGCCGATTCGGTATGCCGCAAGGCTGCAGTTCGACACGACCAACAACGCAGCAGAATA 2040
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGAAGCCATTCTTCTGGGCCTAAGAAAGGCGAAAGCATTAGGGGTTCGGCGCTTGCTAAT 2100
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CCGAACCGACTCTAAGCTGGTGGCGGGCCATGTCGACAAGTCCTTTGAGGCAAAAGAAGA 2160
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AGGAATGAAGAGGTATTTGGAGGTCGTTCGGTCTATGGAAAAGTGTTTCACCGGCATAAC 2220
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GGTCGAACATTTACCTAGAGGCCAGAACGAGGAAGCACACCTTGGCAAAATCTGCTGCTT 2280
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GTGGTGGACCGCATTCGCCTGGCACCTTTTTTGAAGTCCTGTTTGCACCAAGCGTGCCTG 2340
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TGGAGAGCTTGGAGGTCATGGCAATCGACTAGGAGAAACTGGGCGAAGATCCATACGACT 2400
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GGCGAACCCCGTTCGTAAAACACCTTGAAACTGGCTGGCTTCCGGAAGACGAAGCAGAAG 2460
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CAAAGCGCCTGCAACTCAGAGTCACAAAATATAAGATGGTCTCAGGCCAGCTCTATCGCT 2520
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CCGGGGTACTTCAACCCTTGCTTCGCTGCATCTCTTTTGCCGAAGGCGAGGAAATGGCCA 2580
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GGGAGATACACCAGGGGCTATGTGGCGCACACCAAGCCGCAAGAACAGTTGCTTCCAAAG 2640
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TGTTTAGACAAGGAGTTTACTGGCCCACTGTGTTGAAAGTCTGTGTTGAGCAAGTCAAGA 2700
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      AGTGCGAAAGCTGCCAGCGCCATGGCCGAAGCCAAACATCGCCCCAGTATGAGTTGCAGC 2760
consensus_4794#1      -------AAGTTGCCAACGTCATGGCCGAAGCCAAACCGTGCCCCACTATGATTTGCAGC 53
                             *** ***** ** *****************   ****** ***** *******

consensus_4794#0      CCATCGCACCAATCTGGCCCTTCGCCAGATGGGGACTGGACATCATTGGGCTGTTCCCGG 2820
consensus_4794#1      CCATTGCGCCAATCTGGCCCTTTACCAGATGGGGACTGGACATCATTGGGCCGTTCCCGG 113
                      **** ** **************  *************************** ********

consensus_4794#0      TGGCGTGAAACGGGTACAAGTTCGCAATTGTGGCCGTCGAGTACTTCTCTCAATGGATTG 2880
consensus_4794#1      TGGCGCGAAACGGGTATAAGTTCGTAATTGTGGCTGTGGAATATTTCTCTCGGTGGATCG 173
                      ***** ********** ******* ********* ** ** ** *******  ***** *

consensus_4794#0      AGGCCGAACCCCTCGGAGCGATCACTTCGGCAGCAGTACAGAAGTTTGTATGGAAAAACA 2940
consensus_4794#1      AGGCCGAACCCCTCGGAGCAATCACTTCGGCAACAGTACAGAAGTTTGTTAGGAAAAACA 233
                      ******************* ************ ****************  *********

consensus_4794#0      TTGTTTGCCGTTTTGGGGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAATTCGACT 3000
consensus_4794#1      TAATCTGCCGTTTCGGAGTGCCAAAAGAGTTCATCACTGACAATGGCAAGCAGTTCGACT 293
                      *  * ******** ** *********************************** *******

consensus_4794#0      CTGACAAGTTCAGAGAAATGTGCGAAGGGCTTAACCTGGAAATCAGGTTCGCATCGGTCG 3060
consensus_4794#1      CTGACAAGTTCAGAGAGATGTGCGAAGGACTTAACCTGCAAATCAGGTTCGCGTCGGTCG 353
                      **************** *********** ********* ************* *******

consensus_4794#0      CGCACCCACAGTCAAATGGGGCGGCTGAACACACAAACGGTAAGATCCTAGAAGCACTAA 3120
consensus_4794#1      CACACCCGCAGTCAAATGGGGCGGCCGAATGTACAAATGGCAAGATCCTAGAAGCACTAA 413
                      * ***** ***************** ***   ***** ** *******************

consensus_4794#0      A-AAAAGGCTTGAGGGGGCAGCGAAGGGCAAATGGCCAGAGGAGATGCTATCTGTTCTCT 3179
consensus_4794#1      AGAAAAGGCTCGAGGGGGCAGCGAAGGGTAAATGGCTCGAGGAAATGTTATCTGTTCTCT 473
                      * ******** ***************** *******  ***** *** ************

consensus_4794#0      GGGCCCTTCGAACGACCCCCACAAGACCAACCAAGTTCAGCCCGTTCATGCTTATTTATG 3239
consensus_4794#1      GGGCCCTTCGGAC----------------------------------------------- 486
                      ********** **                                               

consensus_4794#0      GCGATGAGGCAATGACCCCGACAGAGCTAGGGGCTAACTCACCAAGGGTGATGTTCTCTG 3299
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GGGACGAAGAGGGGCGCGAGGTGTCGCTCGAACTCTTGGAGGGGGTAAGAGTCGAAGCAC 3359
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TCGAGCACATACGCAAGTACGCCACAGGCACTTCGGCAACTTACAACAAAAAAGTTCGAC 3419
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CGATGGAGCTGTTGCCTGGTCATCTTGTCCTAAGGAAGAAGGCGAACCCGGTAGCCGTTG 3479
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      GCAAGCTTGAATCGAAGTGGGAAGGACCGTACCTCATCAAGCACAAGTCCCGGATGGGGT 3539
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      CCTTTCGACTGGCGACACTGGAAGGCGAAGAGTTCGACCATTCCTGGAACACTGTCTCTT 3599
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TCAAGCATTTCTATGTCTAGAACGGGTGGCACCCAAATCGCCAACTTGTAAAAATGTATA 3659
consensus_4794#1      ------------------------------------------------------------
                                                                                  

consensus_4794#0      TATCATTATGTAAGCCCTTCAGCACAATGTAAGCCCTTCGGCACTATGTAAGCC 3713
consensus_4794#1      ------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)