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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4811#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3404 fasta sequence
[GCTCATGTTTAGCCATTTTTTTATTATTGTGTGAATTTATTTATTTTAGAATTTTTAAGATTAATGTGAGGGCTTCTTATTAGTATAAACAAAGCTTCAGCCGGGATTCTTCTACTGGCCTGCCAAAAAACTATTTTGTAAATTTACAGGATAACAATGGTGTAATTACTCAGATGATGGCATTTGGCCCTTAAGAATTTGAAAAATATTTAACCAGTGCAGATGTTAAAGAAAATATAGCTACTCCCTCCGTCCTAAAATATAAGCATTTTTTGAACCTTGACATGGTCTCCGAGATACTACTTTGACCAACAATATCTATAAAAATAAGATGTTTTAAATAAAAAGAGTTGCATATTATGATTGTTTGTTTAATAATAAATCTAGTAACATCAATTTTATATGATTGCTCTTTTTTAATTTTTTTTTGCTATTAGTGGTCAAAGTTAAAAATGTTTGACTTGTCACTGTGCTAAAAATGCTTATATTTTGGGACGGAGGGAGTATTTATTCTCAAGTAGCTCAAGATTACCAAATTTAATCTATTCAGATTGTTATGTGCAAGCAGATCATAACACCTGAATTGAAGCACATGTTGGGACTCTATCAAATGTTAACATGTGCAGTCAGGCCTCCTCATAGGTTAAACATAAAAATTCTAATACATGGTGGATGGCTCAATGTGTTAGTTCGTGATAGCTCAATTATGTGCTATTAATATACAGAAGGCATGGAACTACAGAACTACAGAAAAGCATAGCATATGTACAACATGAGTCACTCATATTACTCTCAAATACGTAAATGTCTTTCCCTAATCAAATTCAGGATTTTCTGATTTATGTGCTCTGAAATTGTGAACCACCTGAAGTAGAACTCTTTGTCTGCGAAGAAGCTGTGCTATTATGCATCTGCGAAGTTTGACTTGATGAAACATCTGAGAAAAAATTTATGACATCAGGGCTTTCATCAAGAACCTTCAGTGACCTTGGAACAGGAGGCATGTTGACATCAAGGAATCCCTCTAAAATTTGGACGACCTGACCCATTGTAGGTCTGCCATTTTCATCATCTTGGATACACCAGCAGGCAACCTTGCAAGCTTTTGTGAGCTCATCAGCACTGGCATCTCCATTCAACCTGGGGTCTAACAAGGTCTGCACATCACCTTCCTGGAGTTTGTTTACAGCCAAAGTTGGGAAGAAAGAGGACTTTCCCTCCTCCCCTAGATCAGCATTCCTTCTGCCTGATATGAGTTCGAAGAGCATCATGCCATAGCTGAAGACATCTGCCTTAGGAGTAATCGGCACACCACTGATCCACTCAGGCGCAAGGTAATTTAGGCCCCTTGCTGTTCCAAGTGCAATTTGATACCTTATGGCCCAGTTCAGTGCCGTTGTCTCACCATGGAACAGCTGCAATTCCAGGGAGCCCTTTGGCATGTACTCATAGACAAGCAGTCTTCTTGATCCTTCAGAGCAGAAACCAAGTAGGCGAACCAGATTGACATGTTGGATGGTCCCGATGGTGCTTACCTCAGCACGGAATTGCTTCTCCCCCTGGCTCAGTCCATCAAGCCTCTTCACTGCAATGGCTGTTGAATCTGGGAGCTTCCCTTTAAATACTGTGCCAAAGGCACCTCCACCCAGCTTCTCTGAGAAGTTGCTGGTGACATGCTGCAGATCACTGTACCGGAAGGCAATCAGTGCGCCCCCTGTAGTCTTGGATATGCGAAGAGTCCTGTCTCGGCGGCATTTCTGGAATACGATGAACAACACAATTGCAAGGATTATCAAAGCTGCAGCAACTCCACCTACAACTGCACCAATGATCATTTTCTTGCTCTTTTTAGAGTCTGGAAGTTCAGACGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTCCCATTGTATTGGTCTTGGAGGTTAATCAAGTCCCCATGCCAAACAAAGCAGCCACTACTATTGTAAGTGTAAGCATTACAGGAGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCACTCTGAGCATTATCAGGTAGCCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTCTGTGCAGAGCTTGAGTTGGTCTGGCACTGCAACGGTACGTTTCTCTTGCACCCACCAGTAAAATCCTGGAGGTCCCAATCACTCTGAAACTTCTGGCTGAACCCCTTGATGCAGTTGCAGAACGGCAGGACATTGAGGTTGCAACTTCCATATGCGCCGCAGAGCCCGTACACCTCACACTGCGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCCATGTCCACTGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATGGAGTATATGAAGTAGCTCTCCGAGACATTGTTAATGAACCGGAAGTTGTAGTTGTAGCCGGCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAAGGGCCGCTGGTCCAGTAAGTGATGGAGTCGTTCCACTGGATGAAGTACTGCGTTGTGCCGTTGGGATCCAGCTCAAGGGAGAACAGCCCAGGGGACGGGTTTGCATTGTTCCTCCATGGCACAAGCCGCTGGCTCACACCAGTGGTCTTGTTCAGCCCCAGCTTGCCGCCCGGAAGCCAGGTGTTTGTCGGATGATCTATGCTCCTCCAGTAGACTATGGATGAATTGGTGGCATCCATGAGGTCGAGGCTACCGCCGTCCTGGATGACGGCAACGGTGGAGTTGGAGGCCACACTTACGTTGGTCGACCACAGCTGCCTGTTCTTGGATTGATCAAGGAGGACAAGATTGCCATCGCTGCCGATGGACAAGGATGCGGTGGTCGGGTCAGACACCGGCACGTCGCTGTTGGCCGTCCACACCGTCGTCTGCAACGGTATGTTGTTGTACCATATAGCTATGTAGTAGTTGCCGGTGCCGGAGGCGGTGTTGTTACCTTGTGGCGGGGTGTAGAATCCAAGGGCGAACCTGCCGCCCTTGGAGACGATCTTCTGCGTCCCGGACAGCGGCGTGGTGGAGTTGATGGTGTCCACTGCGGTGCAGAGAAAGATTTGGCTGAAGAGGAGGAGGAAGAAGACAGGAGCCATGGATGGATCTTGGCAGAGCAGCCAGGGCTGAGAACCTGGGACGAATGGAAGCTGAGCTTGGCCTTTGGAGTAATTTGATTATGGTGGTTGGAACCTGAGAGGAAGGTAAGCTTGGTCTTATAACTCATATGGACAGCAAGGCTCCACTTCACGAGATATTGCAGAATGAACGCTCTTTGACCTGGCACAGTAGAGGGTTCTGTGGAAAAGGTACATACCCGAAGACCTGGTGTTTGTTTATAGAAGAATAATCAA]
[+] EMBL AK121172 [GCTCATGTTTAGCCATTTTTTTATTATTGTGTGAATTTATTTATTTTAGAATTTTTAAGATTAATGTGAGGGCTTCTTATTAGTATAAACAAAGCTTCAGCCGGGATTCTTCTACTGGCCTGCCAAAAAACTATTTTGTAAATTTACAGGATAACAATGGTGTAATTACTCAGATGATGGCATTTGGCCCTTAAGAATTTGAAAAATATTTAACCAGTGCAGATGTTAAAGAAAATATAGCTACTCCCTCCGTCCTAAAATATAAGCATTTTTTGAACCTTGACATGGTCTCCGAGATACTACTTTGACCAACAATATCTATAAAAATAAGATGTTTTAAATAAAAAGAGTTGCATATTATGATTGTTTGTTTAATAATAAATCTAGTAACATCAATTTTATATGATTGCTCTTTTTTAATTTTTTTTTGCTATTAGTGGTCAAAGTTAAAAATGTTTGACTTGTCACTGTGCTAAAAATGCTTATATTTTGGGACGGAGGGAGTATTTATTCTCAAGTAGCTCAAGATTACCAAATTTAATCTATTCAGATTGTTATGTGCAAGCAGATCATAACACCTGAATTGAAGCACATGTTGGGACTCTATCAAATGTTAACATGTGCAGTCAGGCCTCCTCATAGGTTAAACATAAAAATTCTAATACATGGTGGATGGCTCAATGTGTTAGTTCGTGATAGCTCAATTATGTGCTATTAATATACAGAAGGCATGGAACTACAGAACTACAGAAAAGCATAGCATATGTACAACATGAGTCACTCATATTACTCTCAAATACGTAAATGTCTTTCCCTAATCAAATTCAGGATTTTCTGATTTATGTGCTCTGAAATTGTGAACCACCTGAAGTAGAACTCTTTGTCTGCGAAGAAGCTGTGCTATTATGCATCTGCGAAGTTTGACTTGATGAAACATCTGAGAAAAAATTTATGACATCAGGGCTTTCATCAAGAACCTTCAGTGACCTTGGAACAGGAGGCATGTTGACATCAAGGAATCCCTCTAAAATTTGGACGACCTGACCCATTGTAGGTCTGCCATTTTCATCATCTTGGATACACCAGCAGGCAACCTTGCAAGCTTTTGTGAGCTCATCAGCACTGGCATCTCCATTCAACCTGGGGTCTAACAAGGTCTGCACATCACCTTCCTGGAGTTTGTTTACAGCCAAAGTTGGGAAGAAAGAGGACTTTCCCTCCTCCCCTAGATCAGCATTCCTTCTGCCTGATATGAGTTCGAAGAGCATCATGCCATAGCTGAAGACATCTGCCTTAGGAGTAATCGGCACACCACTGATCCACTCAGGCGCAAGGTAATTTAGGCCCCTTGCTGTTCCAAGTGCAATTTGATACCTTATGGCCCAGTTCAGTGCCGTTGTCTCACCATGGAACAGCTGCAATTCCAGGGAGCCCTTTGGCATGTACTCATAGACAAGCAGTCTTCTTGATCCTTCAGAGCAGAAACCAAGTAGGCGAACCAGATTGACATGTTGGATGGTCCCGATGGTGCTTACCTCAGCACGGAATTGCTTCTCCCCCTGGCTCAGTCCATCAAGCCTCTTCACTGCAATGGCTGTTGAATCTGGGAGCTTCCCTTTAAATACTGTGCCAAAGGCACCTCCACCCAGCTTCTCTGAGAAGTTGCTGGTGACATGCTGCAGATCACTGTACCGGAAGGCAATCAGTGCGCCCCCTGTAGTCTTGGATATGCGAAGAGTCCTGTCTCGGCGGCATTTCTGGAATACGATGAACAACACAATTGCAAGGATTATCAAAGCTGCAGCAACTCCACCTACAACTGCACCAATGATCATTTTCTTGCTCTTTTTAGAGTCTGGAAGTTCAGACGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTCCCATTGTATTGGTCTTGGAGGTTAATCAAGTCCCCATGCCAAACAAAGCAGCCACTACTATTGTAAGTGTAAGCATTACAGGAGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCACTCTGAGCATTATCAGGTAGCCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTCTGTGCAGAGCTTGAGTTGGTCTGGCACTGCAACGGTACGTTTCTCTTGCACCCACCAGTAAAATCCTGGAGGTCCCAATCACTCTGAAACTTCTGGCTGAACCCCTTGATGCAGTTGCAGAACGGCAGGACATTGAGGTTGCAACTTCCATATGCGCCGCAGAGCCCGTACACCTCACACTGCGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCCATGTCCACTGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATGGAGTATATGAAGTAGCTCTCCGAGACATTGTTAATGAACCGGAAGTTGTAGTTGTAGCCGGCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAAGGGCCGCTGGTCCAGTAAGTGATGGAGTCGTTCCACTGGATGAAGTACTGCGTTGTGCCGTTGGGATCCAGCTCAAGGGAGAACAGCCCAGGGGACGGGTTTGCATTGTTCCTCCATGGCACAAGCCGCTGGCTCACACCAGTGGTCTTGTTCAGCCCCAGCTTGCCGCCCGGAAGCCAGGTGTTTGTCGGATGATCTATGCTCCTCCAGTAGACTATGGATGAATTGGTGGCATCCATGAGGTCGAGGCTACCGCCGTCCTGGATGACGGCAACGGTGGAGTTGGAGGCCACACTTACGTTGGTCGACCACAGCTGCCTGTTCTTGGATTGATCAAGGAGGACAAGATTGCCATCGCTGCCGATGGACAAGGATGCGGTGGTCGGGTCAGACACCGGCACGTCGCTGTTGGCCGTCCACACCGTCGTCTGCAACGGTATGTTGTTGTACCATATAGCTATGTAGTAGTTGCCGGTGCCGGAGGCGGTGTTGTTACCTTGTGGCGGGGTGTAGAATCCAAGGGCGAACCTGCCGCCCTTGGAGACGATCTTCTGCGTCCCGGACAGCGGCGTGGTGGAGTTGATGGTGTCCACTGCGGTGCAGAGAAAGATTTGGCTGAAGAGGAGGAGGAAGAAGACAGGAGCCATGGATGGATCTTGGCAGAGCAGCCAGGGCTGAGAACCTGGGACGAATGGAAGCTGAGCTTGGCCTTTGGAGTAATTTGATTATGGTGGTTGGAACCTGAGAGGAAGGTAAGCTTGGTCTTATAACTCATATGGACAGCAAGGCTCCACTTCACGAGATATTGCAGAATGAACGCTCTTTGACCTGGCACAGTAGAGGGTTCTGTGGAAAAGGTACATACCCGAAGACCTGGTGTTTGTTTATAGAAGAATAATCAA]
[+] EMBL CB639952 [ aCACATGTTGGGACTCTATCAAATGTTAACATGTGCAGTCAGGCCTCCTCATAGGTTAAACATAAAAATTCTAATACATGGTGGATGGCTCAATGTGTTAGTTCGTGATAGCTCAATTATGTGCTATTAATATACAGAAGGCATGGAACTACAGAACTACAGAAAAGCATAGCATATGTACAACATGAGTCACTCATATTACTCTCAAATACGTAAATGTCTTTCCCTAATCAAATTCAGGATTTTCTGATTTATGTGCTCTGAAATTGTGAACCACCTGAAGTAGAACTCTTTGTCTGCGAAGAAGCTGTGCTATTATGCATCTGCGAAGTTTGACTTGATGAAACATCTGAGAAAAAATTTATGACATCAGGGCTTTCATCAAGAACCTTCAGTGACCTTGGAACAGGAGGCATGTTGACATCAAGGAATCCCTCTAAAATTTGGACGACCTGACCCATTGTAGGTCTGCCATTTTCATCATCTTGGATACACCAGCAGGCAACCTTGCAAGCTTTTGTGAGCTCATCAGCACTGGCATCTCCATTCAACCTGNGGTCTAACAAGGTCTGCACA ]
consensusID : consensus_4811#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2414 fasta sequence
[TGCACATCACCTTCCTGGAGTTTGTTTACAGCCAAAGTTGGGAAGAAAGAGGACTTTCCCTCCTCCCCTAGATCAGCATTCCTTCTGCCTGATATGAGTTCGAAGAGCATCATGCCATAGCTGAAGACATCTGCCTTAGGAGTAATCGGCACACCACTGATCCACTCAGGCGCAAGGTAATTTAGGCCCCTTGCTGTTCCAAGTGCAATTTGATACCTTATGGCCCAGTTCAGTGCCGTTGTCTCACCATGGAACAGCTGCAATTCCAGGGAGCCCTTTGGCATGTACTCATAGACAAGCAGTCTTCTTGATCCTTCAGAGCAGAAACCAAGTAGGCGAACCAGATTGACATGTTGGATGGTCCCGATGGTGCTTACCTCAGCACGGAATTGCTTCTCCCCCTGGCTCAGTCCATCAAGCCTCTTCACTGCAATGGCTGTTGAATCTGGGAGCTTCCCTTTAAATACTGTGCCAAAGGCACCTCCACCCAGCTTCTCTGAGAAGTTGCTGGTGACATGCTGCAGATCACTGTACCGGAAGGCAATCAGTGCGCCCCCTGTAGTCTTGGATATGCGAAGAGTCCTGTCTCGGCGGCATTTCTGGAATACGATGAACAACACAATTGCAAGGATTATCAAAGCTGCAGCAACTCCACCTACAACTGCACCAATGATCATTTTCTTGCTCTTTTTAGAGTCTGGAAGTTCAGACGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTCCCATTGTATTGGTCTTGGAGGTTAATCAAGTCCCCATGCCAAACAAAGCAGCCACTACTATTGTAAGTGTAAGCATTACAGGAGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCACTCTGAGCATTATCAGGTAGTCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTCTGTGCAGAGCTTGAGTTGGTCTGGCACTGCAACGGTACGTTTCTCTTGCACCCACCAGTAAAATCCTGGAGGTCCCAATCACTCTGAAACTTCTGGCTGAACCCCTTGATGCAGTTGCAGAACGGCAGGACATTGAGGTTGCAACTTCCATATGCGCCGCAGAGCCCGTACACCTCACACTGCGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCCATGTCCACTGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATGGAGTATATGAAGTAGCTCTCCGAGACATTGTTAATGAACCGGAAGTTGTAGTTGTAGCCGGCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAAGGGCCGCTGGTCCAGTAAGTGATGGAGTCGTTCCACTGGATGAAGTACTGCGTTGTGCCGTTGGGATCCAGCTCAAGGGAGAACAGCCCAGGGGACGGGTTTGCATTGTTCCTCCATGGCACAAGCCGCTGGCTCACACCAGTGGTCTTGTTCAGCCCCAGCTTGCCGCCCGGAAGCCAGGTGTTTGTCGGATGATCTATGCTCCTCCAGTAGACTATGGATGAATTGGTGGCATCCATGAGGTCGAGGCTACCGCCGTCCTGGATGACGGCAACGGTGGAGTTGGAGGCCACACTTACGTTGGTCGACCACAGCTGCCTGTTCTTGGATTGATCAAGGAGGACAAGATTGCCATCGCTGCCGATGGACAAGGATGCGGTGGTCGGGTCAGACACCGGCACGTCGCTGTTGGCCGTCCACACCGTCGTCTGCAACGGTATGTTGTTGTACCATATAGCTATGTAGTAGTTGCCGGTGCCGGAGGCGGTGTTGTTACCTTGTGGCGGGGTGTAGAATCCAAGGGCGAACCTGCCGCCCTTGGAGACGATCTTCTGCGTCCCGGACAGCGGCGTGGTGGAGTTGATGGTGTCCACTGCGGTGCAGAGAAAGATTTGGCTGAAGAGGAGGAGGAAGAAGACAGGAGCCATGGATGGATCTTGGCAGAGCAGCCAGGGCTGAGAACCTGGGACGAATGGAAGCTGAGCTTGGCCTTTGGAGTAATTTGATTATGGTGGTTGGAACCTGAGAGGAAGGTAAGCTTGGTCTTATAACTCATATGGACAGCAAGGCTCCACTTCACGAGATATTGCAGAATGAACGCTCTTTGACCTGGCACAGTAGAGGGTTCTGTGGAAAAGGAGGGGTGCAGAAAATTGGTTCTACAGTTTTGCTTGCGAAATAGTACTGTTCCTAGTATTAATTAATTTTGCTGCCTGTTCAACTAATCAACTTGTGTTCTAGGATTGAAGATATTCGTGTCCCCTCTTAGTAATTTATTAGTATTCACATTTGTGAACAGAGACGCCAACATCTGCTATGATGCTATCCTCTTAGTAATTTATTCTGTTGCG]
[+] EMBL AK064506 [TGCACATCACCTTCCTGGAGTTTGTTTACAGCCAAAGTTGGGAAGAAAGAGGACTTTCCCTCCTCCCCTAGATCAGCATTCCTTCTGCCTGATATGAGTTCGAAGAGCATCATGCCATAGCTGAAGACATCTGCCTTAGGAGTAATCGGCACACCACTGATCCACTCAGGCGCAAGGTAATTTAGGCCCCTTGCTGTTCCAAGTGCAATTTGATACCTTATGGCCCAGTTCAGTGCCGTTGTCTCACCATGGAACAGCTGCAATTCCAGGGAGCCCTTTGGCATGTACTCATAGACAAGCAGTCTTCTTGATCCTTCAGAGCAGAAACCAAGTAGGCGAACCAGATTGACATGTTGGATGGTCCCGATGGTGCTTACCTCAGCACGGAATTGCTTCTCCCCCTGGCTCAGTCCATCAAGCCTCTTCACTGCAATGGCTGTTGAATCTGGGAGCTTCCCTTTAAATACTGTGCCAAAGGCACCTCCACCCAGCTTCTCTGAGAAGTTGCTGGTGACATGCTGCAGATCACTGTACCGGAAGGCAATCAGTGCGCCCCCTGTAGTCTTGGATATGCGAAGAGTCCTGTCTCGGCGGCATTTCTGGAATACGATGAACAACACAATTGCAAGGATTATCAAAGCTGCAGCAACTCCACCTACAACTGCACCAATGATCATTTTCTTGCTCTTTTTAGAGTCTGGAAGTTCAGACGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTCCCATTGTATTGGTCTTGGAGGTTAATCAAGTCCCCATGCCAAACAAAGCAGCCACTACTATTGTAAGTGTAAGCATTACAGGAGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCACTCTGAGCATTATCAGGTAGTCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTCTGTGCAGAGCTTGAGTTGGTCTGGCACTGCAACGGTACGTTTCTCTTGCACCCACCAGTAAAATCCTGGAGGTCCCAATCACTCTGAAACTTCTGGCTGAACCCCTTGATGCAGTTGCAGAACGGCAGGACATTGAGGTTGCAACTTCCATATGCGCCGCAGAGCCCGTACACCTCACACTGCGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCCATGTCCACTGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATGGAGTATATGAAGTAGCTCTCCGAGACATTGTTAATGAACCGGAAGTTGTAGTTGTAGCCGGCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAAGGGCCGCTGGTCCAGTAAGTGATGGAGTCGTTCCACTGGATGAAGTACTGCGTTGTGCCGTTGGGATCCAGCTCAAGGGAGAACAGCCCAGGGGACGGGTTTGCATTGTTCCTCCATGGCACAAGCCGCTGGCTCACACCAGTGGTCTTGTTCAGCCCCAGCTTGCCGCCCGGAAGCCAGGTGTTTGTCGGATGATCTATGCTCCTCCAGTAGACTATGGATGAATTGGTGGCATCCATGAGGTCGAGGCTACCGCCGTCCTGGATGACGGCAACGGTGGAGTTGGAGGCCACACTTACGTTGGTCGACCACAGCTGCCTGTTCTTGGATTGATCAAGGAGGACAAGATTGCCATCGCTGCCGATGGACAAGGATGCGGTGGTCGGGTCAGACACCGGCACGTCGCTGTTGGCCGTCCACACCGTCGTCTGCAACGGTATGTTGTTGTACCATATAGCTATGTAGTAGTTGCCGGTGCCGGAGGCGGTGTTGTTACCTTGTGGCGGGGTGTAGAATCCAAGGGCGAACCTGCCGCCCTTGGAGACGATCTTCTGCGTCCCGGACAGCGGCGTGGTGGAGTTGATGGTGTCCACTGCGGTGCAGAGAAAGATTTGGCTGAAGAGGAGGAGGAAGAAGACAGGAGCCATGGATGGATCTTGGCAGAGCAGCCAGGGCTGAGAACCTGGGACGAATGGAAGCTGAGCTTGGCCTTTGGAGTAATTTGATTATGGTGGTTGGAACCTGAGAGGAAGGTAAGCTTGGTCTTATAACTCATATGGACAGCAAGGCTCCACTTCACGAGATATTGCAGAATGAACGCTCTTTGACCTGGCACAGTAGAGGGTTCTGTGGAAAAGGAGGGGTGCAGAAAATTGGTTCTACAGTTTTGCTTGCGAAATAGTACTGTTCCTAGTATTAATTAATTTTGCTGCCTGTTCAACTAATCAACTTGTGTTCTAGGATTGAAGATATTCGTGTCCCCTCTTAGTAATTTATTAGTATTCACATTTGTGAACAGAGACGCCAACATCTGCTATGATGCTATCCTCTTAGTAATTTATTCTGTTGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4811#0 GCTCATGTTTAGCCATTTTTTTATTATTGTGTGAATTTATTTATTTTAGAATTTTTAAGA 60
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TTAATGTGAGGGCTTCTTATTAGTATAAACAAAGCTTCAGCCGGGATTCTTCTACTGGCC 120
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TGCCAAAAAACTATTTTGTAAATTTACAGGATAACAATGGTGTAATTACTCAGATGATGG 180
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CATTTGGCCCTTAAGAATTTGAAAAATATTTAACCAGTGCAGATGTTAAAGAAAATATAG 240
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CTACTCCCTCCGTCCTAAAATATAAGCATTTTTTGAACCTTGACATGGTCTCCGAGATAC 300
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TACTTTGACCAACAATATCTATAAAAATAAGATGTTTTAAATAAAAAGAGTTGCATATTA 360
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TGATTGTTTGTTTAATAATAAATCTAGTAACATCAATTTTATATGATTGCTCTTTTTTAA 420
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TTTTTTTTTGCTATTAGTGGTCAAAGTTAAAAATGTTTGACTTGTCACTGTGCTAAAAAT 480
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 GCTTATATTTTGGGACGGAGGGAGTATTTATTCTCAAGTAGCTCAAGATTACCAAATTTA 540
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 ATCTATTCAGATTGTTATGTGCAAGCAGATCATAACACCTGAATTGAAGCACATGTTGGG 600
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 ACTCTATCAAATGTTAACATGTGCAGTCAGGCCTCCTCATAGGTTAAACATAAAAATTCT 660
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 AATACATGGTGGATGGCTCAATGTGTTAGTTCGTGATAGCTCAATTATGTGCTATTAATA 720
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TACAGAAGGCATGGAACTACAGAACTACAGAAAAGCATAGCATATGTACAACATGAGTCA 780
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CTCATATTACTCTCAAATACGTAAATGTCTTTCCCTAATCAAATTCAGGATTTTCTGATT 840
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 TATGTGCTCTGAAATTGTGAACCACCTGAAGTAGAACTCTTTGTCTGCGAAGAAGCTGTG 900
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CTATTATGCATCTGCGAAGTTTGACTTGATGAAACATCTGAGAAAAAATTTATGACATCA 960
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 GGGCTTTCATCAAGAACCTTCAGTGACCTTGGAACAGGAGGCATGTTGACATCAAGGAAT 1020
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CCCTCTAAAATTTGGACGACCTGACCCATTGTAGGTCTGCCATTTTCATCATCTTGGATA 1080
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CACCAGCAGGCAACCTTGCAAGCTTTTGTGAGCTCATCAGCACTGGCATCTCCATTCAAC 1140
consensus_4811#1 ------------------------------------------------------------
consensus_4811#0 CTGGGGTCTAACAAGGTCTGCACATCACCTTCCTGGAGTTTGTTTACAGCCAAAGTTGGG 1200
consensus_4811#1 ------------------TGCACATCACCTTCCTGGAGTTTGTTTACAGCCAAAGTTGGG 42
******************************************
consensus_4811#0 AAGAAAGAGGACTTTCCCTCCTCCCCTAGATCAGCATTCCTTCTGCCTGATATGAGTTCG 1260
consensus_4811#1 AAGAAAGAGGACTTTCCCTCCTCCCCTAGATCAGCATTCCTTCTGCCTGATATGAGTTCG 102
************************************************************
consensus_4811#0 AAGAGCATCATGCCATAGCTGAAGACATCTGCCTTAGGAGTAATCGGCACACCACTGATC 1320
consensus_4811#1 AAGAGCATCATGCCATAGCTGAAGACATCTGCCTTAGGAGTAATCGGCACACCACTGATC 162
************************************************************
consensus_4811#0 CACTCAGGCGCAAGGTAATTTAGGCCCCTTGCTGTTCCAAGTGCAATTTGATACCTTATG 1380
consensus_4811#1 CACTCAGGCGCAAGGTAATTTAGGCCCCTTGCTGTTCCAAGTGCAATTTGATACCTTATG 222
************************************************************
consensus_4811#0 GCCCAGTTCAGTGCCGTTGTCTCACCATGGAACAGCTGCAATTCCAGGGAGCCCTTTGGC 1440
consensus_4811#1 GCCCAGTTCAGTGCCGTTGTCTCACCATGGAACAGCTGCAATTCCAGGGAGCCCTTTGGC 282
************************************************************
consensus_4811#0 ATGTACTCATAGACAAGCAGTCTTCTTGATCCTTCAGAGCAGAAACCAAGTAGGCGAACC 1500
consensus_4811#1 ATGTACTCATAGACAAGCAGTCTTCTTGATCCTTCAGAGCAGAAACCAAGTAGGCGAACC 342
************************************************************
consensus_4811#0 AGATTGACATGTTGGATGGTCCCGATGGTGCTTACCTCAGCACGGAATTGCTTCTCCCCC 1560
consensus_4811#1 AGATTGACATGTTGGATGGTCCCGATGGTGCTTACCTCAGCACGGAATTGCTTCTCCCCC 402
************************************************************
consensus_4811#0 TGGCTCAGTCCATCAAGCCTCTTCACTGCAATGGCTGTTGAATCTGGGAGCTTCCCTTTA 1620
consensus_4811#1 TGGCTCAGTCCATCAAGCCTCTTCACTGCAATGGCTGTTGAATCTGGGAGCTTCCCTTTA 462
************************************************************
consensus_4811#0 AATACTGTGCCAAAGGCACCTCCACCCAGCTTCTCTGAGAAGTTGCTGGTGACATGCTGC 1680
consensus_4811#1 AATACTGTGCCAAAGGCACCTCCACCCAGCTTCTCTGAGAAGTTGCTGGTGACATGCTGC 522
************************************************************
consensus_4811#0 AGATCACTGTACCGGAAGGCAATCAGTGCGCCCCCTGTAGTCTTGGATATGCGAAGAGTC 1740
consensus_4811#1 AGATCACTGTACCGGAAGGCAATCAGTGCGCCCCCTGTAGTCTTGGATATGCGAAGAGTC 582
************************************************************
consensus_4811#0 CTGTCTCGGCGGCATTTCTGGAATACGATGAACAACACAATTGCAAGGATTATCAAAGCT 1800
consensus_4811#1 CTGTCTCGGCGGCATTTCTGGAATACGATGAACAACACAATTGCAAGGATTATCAAAGCT 642
************************************************************
consensus_4811#0 GCAGCAACTCCACCTACAACTGCACCAATGATCATTTTCTTGCTCTTTTTAGAGTCTGGA 1860
consensus_4811#1 GCAGCAACTCCACCTACAACTGCACCAATGATCATTTTCTTGCTCTTTTTAGAGTCTGGA 702
************************************************************
consensus_4811#0 AGTTCAGACGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTCCCATTGTATTGGTCT 1920
consensus_4811#1 AGTTCAGACGCTGCAAGCCTGAGGAAGAGTGTGCCTCCTCCATTCCCATTGTATTGGTCT 762
************************************************************
consensus_4811#0 TGGAGGTTAATCAAGTCCCCATGCCAAACAAAGCAGCCACTACTATTGTAAGTGTAAGCA 1980
consensus_4811#1 TGGAGGTTAATCAAGTCCCCATGCCAAACAAAGCAGCCACTACTATTGTAAGTGTAAGCA 822
************************************************************
consensus_4811#0 TTACAGGAGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCA 2040
consensus_4811#1 TTACAGGAGCAATTATTCAGGCAAGCAACCTGACAGGCCTGAGAACTAGCGGCCACTGCA 882
************************************************************
consensus_4811#0 CTCTGAGCATTATCAGGTAGCCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTC 2100
consensus_4811#1 CTCTGAGCATTATCAGGTAGTCTCACACTAACCATGGAATAGAACTTATCAGGCTGAGTC 942
******************** ***************************************
consensus_4811#0 TGTGCAGAGCTTGAGTTGGTCTGGCACTGCAACGGTACGTTTCTCTTGCACCCACCAGTA 2160
consensus_4811#1 TGTGCAGAGCTTGAGTTGGTCTGGCACTGCAACGGTACGTTTCTCTTGCACCCACCAGTA 1002
************************************************************
consensus_4811#0 AAATCCTGGAGGTCCCAATCACTCTGAAACTTCTGGCTGAACCCCTTGATGCAGTTGCAG 2220
consensus_4811#1 AAATCCTGGAGGTCCCAATCACTCTGAAACTTCTGGCTGAACCCCTTGATGCAGTTGCAG 1062
************************************************************
consensus_4811#0 AACGGCAGGACATTGAGGTTGCAACTTCCATATGCGCCGCAGAGCCCGTACACCTCACAC 2280
consensus_4811#1 AACGGCAGGACATTGAGGTTGCAACTTCCATATGCGCCGCAGAGCCCGTACACCTCACAC 1122
************************************************************
consensus_4811#0 TGCGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCCATGTCCAC 2340
consensus_4811#1 TGCGTCCGTGGCTGGGACCAGAACAAGATCCAATTCTCCGAGGCTGGTACCCATGTCCAC 1182
************************************************************
consensus_4811#0 TGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATG 2400
consensus_4811#1 TGCTTGATCTGCCCATTCACATCAATGGTGAACCGCGAGATGATCGAGTCATCCTTCATG 1242
************************************************************
consensus_4811#0 GAGTATATGAAGTAGCTCTCCGAGACATTGTTAATGAACCGGAAGTTGTAGTTGTAGCCG 2460
consensus_4811#1 GAGTATATGAAGTAGCTCTCCGAGACATTGTTAATGAACCGGAAGTTGTAGTTGTAGCCG 1302
************************************************************
consensus_4811#0 GCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAAGGGCCGCTGGTCCAGTAA 2520
consensus_4811#1 GCCGTCATCTCGGGCACAAGACTGAAGATATTACCGTTCCAAGGGCCGCTGGTCCAGTAA 1362
************************************************************
consensus_4811#0 GTGATGGAGTCGTTCCACTGGATGAAGTACTGCGTTGTGCCGTTGGGATCCAGCTCAAGG 2580
consensus_4811#1 GTGATGGAGTCGTTCCACTGGATGAAGTACTGCGTTGTGCCGTTGGGATCCAGCTCAAGG 1422
************************************************************
consensus_4811#0 GAGAACAGCCCAGGGGACGGGTTTGCATTGTTCCTCCATGGCACAAGCCGCTGGCTCACA 2640
consensus_4811#1 GAGAACAGCCCAGGGGACGGGTTTGCATTGTTCCTCCATGGCACAAGCCGCTGGCTCACA 1482
************************************************************
consensus_4811#0 CCAGTGGTCTTGTTCAGCCCCAGCTTGCCGCCCGGAAGCCAGGTGTTTGTCGGATGATCT 2700
consensus_4811#1 CCAGTGGTCTTGTTCAGCCCCAGCTTGCCGCCCGGAAGCCAGGTGTTTGTCGGATGATCT 1542
************************************************************
consensus_4811#0 ATGCTCCTCCAGTAGACTATGGATGAATTGGTGGCATCCATGAGGTCGAGGCTACCGCCG 2760
consensus_4811#1 ATGCTCCTCCAGTAGACTATGGATGAATTGGTGGCATCCATGAGGTCGAGGCTACCGCCG 1602
************************************************************
consensus_4811#0 TCCTGGATGACGGCAACGGTGGAGTTGGAGGCCACACTTACGTTGGTCGACCACAGCTGC 2820
consensus_4811#1 TCCTGGATGACGGCAACGGTGGAGTTGGAGGCCACACTTACGTTGGTCGACCACAGCTGC 1662
************************************************************
consensus_4811#0 CTGTTCTTGGATTGATCAAGGAGGACAAGATTGCCATCGCTGCCGATGGACAAGGATGCG 2880
consensus_4811#1 CTGTTCTTGGATTGATCAAGGAGGACAAGATTGCCATCGCTGCCGATGGACAAGGATGCG 1722
************************************************************
consensus_4811#0 GTGGTCGGGTCAGACACCGGCACGTCGCTGTTGGCCGTCCACACCGTCGTCTGCAACGGT 2940
consensus_4811#1 GTGGTCGGGTCAGACACCGGCACGTCGCTGTTGGCCGTCCACACCGTCGTCTGCAACGGT 1782
************************************************************
consensus_4811#0 ATGTTGTTGTACCATATAGCTATGTAGTAGTTGCCGGTGCCGGAGGCGGTGTTGTTACCT 3000
consensus_4811#1 ATGTTGTTGTACCATATAGCTATGTAGTAGTTGCCGGTGCCGGAGGCGGTGTTGTTACCT 1842
************************************************************
consensus_4811#0 TGTGGCGGGGTGTAGAATCCAAGGGCGAACCTGCCGCCCTTGGAGACGATCTTCTGCGTC 3060
consensus_4811#1 TGTGGCGGGGTGTAGAATCCAAGGGCGAACCTGCCGCCCTTGGAGACGATCTTCTGCGTC 1902
************************************************************
consensus_4811#0 CCGGACAGCGGCGTGGTGGAGTTGATGGTGTCCACTGCGGTGCAGAGAAAGATTTGGCTG 3120
consensus_4811#1 CCGGACAGCGGCGTGGTGGAGTTGATGGTGTCCACTGCGGTGCAGAGAAAGATTTGGCTG 1962
************************************************************
consensus_4811#0 AAGAGGAGGAGGAAGAAGACAGGAGCCATGGATGGATCTTGGCAGAGCAGCCAGGGCTGA 3180
consensus_4811#1 AAGAGGAGGAGGAAGAAGACAGGAGCCATGGATGGATCTTGGCAGAGCAGCCAGGGCTGA 2022
************************************************************
consensus_4811#0 GAACCTGGGACGAATGGAAGCTGAGCTTGGCCTTTGGAGTAATTTGATTATGGTGGTTGG 3240
consensus_4811#1 GAACCTGGGACGAATGGAAGCTGAGCTTGGCCTTTGGAGTAATTTGATTATGGTGGTTGG 2082
************************************************************
consensus_4811#0 AACCTGAGAGGAAGGTAAGCTTGGTCTTATAACTCATATGGACAGCAAGGCTCCACTTCA 3300
consensus_4811#1 AACCTGAGAGGAAGGTAAGCTTGGTCTTATAACTCATATGGACAGCAAGGCTCCACTTCA 2142
************************************************************
consensus_4811#0 CGAGATATTGCAGAATGAACGCTCTTTGACCTGGCACAGTAGAGGGTTCTGTGGAAAAGG 3360
consensus_4811#1 CGAGATATTGCAGAATGAACGCTCTTTGACCTGGCACAGTAGAGGGTTCTGTGGAAAAGG 2202
************************************************************
consensus_4811#0 TACATACCCGAAGACCTGGTGT------TTGTTTATAGAAGAATAATCAA---------- 3404
consensus_4811#1 AGGGGTGCAGAAAATTGGTTCTACAGTTTTGCTTGCGAAATAGTACTGTTCCTAGTATTA 2262
* *** * * * * *** ** ** * ** *
consensus_4811#0 ------------------------------------------------------------
consensus_4811#1 ATTAATTTTGCTGCCTGTTCAACTAATCAACTTGTGTTCTAGGATTGAAGATATTCGTGT 2322
consensus_4811#0 ------------------------------------------------------------
consensus_4811#1 CCCCTCTTAGTAATTTATTAGTATTCACATTTGTGAACAGAGACGCCAACATCTGCTATG 2382
consensus_4811#0 --------------------------------
consensus_4811#1 ATGCTATCCTCTTAGTAATTTATTCTGTTGCG 2414
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||