cluster # 4828

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Oryza sativa
cluster # 4828 cluster # 4828 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4828#0 length = 3265 sequences # 1

consensus_4828#1 length = 755 sequences # 2

consensusID : consensus_4828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3265
fasta sequence

                              [TGATTTCTCCTTCTCCGCCGCCGCCCAACCCTAACCCCCCATATCATCATCCGCGTCGTCCTTCGTCGCTCCTCGGCTCAAGGGTTCAACTCGAACTCACGGCACAGGAGCATGAACACGGCGACGGCGGCGGCAGAGGATAACGGCGGCGGCGGCGGCGGCAGAGCAACATGGCAGCGAAAGGCAAGGAGAGCAAATACTAGGGTTCGAGCGAGTTGCCACTTGCCAGCCCCGATCCATCCCTCCTGATCCATCCAGTAGCAACGCGAAGTTACAATAATACCCTTCCAACCAAGTTGTCTGGGCGGTACCGCATCAGGGACATTCTTGGTACCGGGAGGTACCAAACAATCCAGCCGTTGGATCGGGCCAGATCCAACGGCCAGCATTCGGTACCGCCCGGTACCATTGGACGGTAAAAACTCTCATCTATGTAAGGCAACTAAACAATACAGAGTGGAGAGATTTCAACCCAGAGAGTTATTTTATGGTTATGTTCTCAAACCGGATCAAGAATTCCAATTTTTTATCACATAGGCAAGCATGGTAGATATTTGTAAGAATCCATACATTTCCAGAAATATTTGATGTTAGAGCAACTGGGAGAGAGAAGTCATTAAAATATGTTTGTTCCCTTCTAACTGTACTTCTGACCGGACAATCAGTAAACCTCCCAAATTTCCTTGAGATGGTAAGAACACGAACTTGTTCAACTGAGCTGGGTAGAAATTTTTAGTATATGTTGCCTCAATTGTTTTTCTTTGTTTCTTGAAGGCAGATGATGTTATAATTAGAATCACTGATTTTATTTTCTGATTGCATTCCACTTATCAGCAGAATGAATGCCTCTAACATTCCAACATGGAATATTGAAATTTTTGATTCATTGTCAATGCTTGTTGTTCAGAATTAAAATTTCTGATATCTTTCAAAAGACCAGAAGTGAGCAGATTTTAGACAGCTAGTGTGTCTTCCACAATTATGCATATAGGAGTGGACCAGAAGAAATAACATTGATGTTATAAAGGATTCTCTGGATCTTGTACCTGTGGTAACATATGCTGGAGATACTGCATTTCAGATTCACTGCTTGGAGCGATCAACATATACCCTTGAAAGTTCTGTACAAAGAAAGATGCATTGCATAGTGATATCTCGTGATCTAGCTTGTATAATTAAGTGAACGACAGATAAACGGTATACTCTTGAGAGGAGTTTTGTTCATTCCATATTATCTTTCTTTTGTGCAGTTATAGTTATTATATACTCTTATGGAATTATTTTGATTTATTATACTTCATTGCTTCGTCTGTATATTCTGTTGTTTTTACCTTACAATTACAGGCCAAACTTCTTACTAAACTTCCTTTTTTTTACGCAAAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGAACGAAGGAAGAAGATAGAAGAGAAAAAAGAAAGAAGAAAGAAAGAAGAAATAAGAAAGAAAATGAAAGAGGGAAAGAGTAGCATATGAATACAATTGTCTGCATATTCTGGGAGGTTGGAAACGCTTGTGTTAGCTCAGTTGAATACCGCATCATTCCTTGCCTTCCATAGGTTGTGAGCACAGGCAGCGAAGCATATCAACCATCCCAGCTTGAGGTGGCCCTGAGAAGAACCTAGGACTTCATCAACGAATTGGAGGATGTCAGTGCATTGGATTGCTATGGAATTTAGGCCGAGTTTTGTCCAGAGGGCCTCAGCCAGTTTGCAACGCAACACAATGTGGTCTGCTGATTCAATTGCTGGGCAGATGTTGCAGTGTGGGTCAGACGACCACTTTTGTGCGTTCTGTTGTTGTTGGAGTTTAACCTGTCTTTGAAGGCTAGCTAGAGGAAGATTCTGCAAGTATTTGGGATGGCTTTGAGCCATATGAATTCAGCCGGCTTCCATGATATGCCATGGAATGTGAGGAGTCTGTAAAATGCTGCGGTTGTTATTCCGTTGAGGGATTGAAGGCATGATCTTGTATCTGGTGCATCTGCATGTGGTTGAAGAGTTGCCAAAGTGTTCATGAGGAGGTTGAGTTCTGTCTGTGCCTGGTTTGATAACACTGGGTGGAGATTAATCGCTCAGGTGTTTTGTGTGAATTGTGAGGCGACTGTACAGTTGATGTTGGTTGCAAATGATGCCAGTGATGGGTAGGTGATGAAGAAGCAGCCGTCGTCCGTCCAATGGTCTTTCCAGAATTGCACCGCAAGGTCGCTTCCCAGCGAAACTTTGGTTGATGCTATTGTTGGTTCCAATGCTCCACAGATCATCTTCCAAACCGGTGTATCAGTTGGTCTTGCTAGGATAGGAATCTCGTTCTGCAGGTGCTGTGCTCTGAGCCAGTGGAAGCATGGCTCCGGGGAGCCAGATAGCAGCTTGCTTGCAAGTTTCATTAGTAGCGACAGGTTGTGAGCTTTGAGATCTCGTATGCCCAGTCCTCCCTCTTCTTTTGACATGGTGACAGTATCCCAGGCGAAAAGGCAATGACCTCCTACTAAACTGAGAAATAAACTAAAATTTCGGATGCTGAGCTTAGAGAAGTTTTCATGAATATCACTTCAAATGAGTATAGTTACTTCGAATGAGTATGTCACGCCTTTGCGGTGAACATATCTACTTGTTGCCTCCCAGGAAACAAAAATCATGCTGATTAATCAGATGTCAATTACTTCTTTGCAGTAAGCAGGAAATGTTGTTTGGCAAATAACTCTGTTCTTTAGGATCCTGCTTTTGGTGCACATGCCATGGTTCCAGATAAGATTGTCAAAGATGGACAAGCTTCACCTCATTCACAAACTGCATCAGTTTGGCTTAGGAATCACAAATACCTTGACGTTCAATGCCATCCATGAGGTGACTGTATCTTCTTTATTATTTCACATAAGATTGTTCAGAAATCAAGTAACTGTTGGGTTTTCAGCTCGCTGACCAATTTTGGACTTATGAAACAGGAGTGTCGACATATTATGGATCATGCAGTAATCTAAGAAGTTGAAATCTGGAAATGGGTGTGCATTATCATATTTAAAAATCTTCTCCTGCTGAACAATTGCCAGTTGCGGGATTCCTCTGTGCAGGTGGTATGTATTGTTTTGTTTTTTAAGTTAAGATCGAACTATAATATGTGTGCTTTTCTCAATGAAATGGTTTATTTGGTGCTTCTTT]

[+] EMBL AK065401             [TGATTTCTCCTTCTCCGCCGCCGCCCAACCCTAACCCCCCATATCATCATCCGCGTCGTCCTTCGTCGCTCCTCGGCTCAAGGGTTCAACTCGAACTCACGGCACAGGAGCATGAACACGGCGACGGCGGCGGCAGAGGATAACGGCGGCGGCGGCGGCGGCAGAGCAACATGGCAGCGAAAGGCAAGGAGAGCAAATACTAGGGTTCGAGCGAGTTGCCACTTGCCAGCCCCGATCCATCCCTCCTGATCCATCCAGTAGCAACGCGAAGTTACAATAATACCCTTCCAACCAAGTTGTCTGGGCGGTACCGCATCAGGGACATTCTTGGTACCGGGAGGTACCAAACAATCCAGCCGTTGGATCGGGCCAGATCCAACGGCCAGCATTCGGTACCGCCCGGTACCATTGGACGGTAAAAACTCTCATCTATGTAAGGCAACTAAACAATACAGAGTGGAGAGATTTCAACCCAGAGAGTTATTTTATGGTTATGTTCTCAAACCGGATCAAGAATTCCAATTTTTTATCACATAGGCAAGCATGGTAGATATTTGTAAGAATCCATACATTTCCAGAAATATTTGATGTTAGAGCAACTGGGAGAGAGAAGTCATTAAAATATGTTTGTTCCCTTCTAACTGTACTTCTGACCGGACAATCAGTAAACCTCCCAAATTTCCTTGAGATGGTAAGAACACGAACTTGTTCAACTGAGCTGGGTAGAAATTTTTAGTATATGTTGCCTCAATTGTTTTTCTTTGTTTCTTGAAGGCAGATGATGTTATAATTAGAATCACTGATTTTATTTTCTGATTGCATTCCACTTATCAGCAGAATGAATGCCTCTAACATTCCAACATGGAATATTGAAATTTTTGATTCATTGTCAATGCTTGTTGTTCAGAATTAAAATTTCTGATATCTTTCAAAAGACCAGAAGTGAGCAGATTTTAGACAGCTAGTGTGTCTTCCACAATTATGCATATAGGAGTGGACCAGAAGAAATAACATTGATGTTATAAAGGATTCTCTGGATCTTGTACCTGTGGTAACATATGCTGGAGATACTGCATTTCAGATTCACTGCTTGGAGCGATCAACATATACCCTTGAAAGTTCTGTACAAAGAAAGATGCATTGCATAGTGATATCTCGTGATCTAGCTTGTATAATTAAGTGAACGACAGATAAACGGTATACTCTTGAGAGGAGTTTTGTTCATTCCATATTATCTTTCTTTTGTGCAGTTATAGTTATTATATACTCTTATGGAATTATTTTGATTTATTATACTTCATTGCTTCGTCTGTATATTCTGTTGTTTTTACCTTACAATTACAGGCCAAACTTCTTACTAAACTTCCTTTTTTTTACGCAAAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGAACGAAGGAAGAAGATAGAAGAGAAAAAAGAAAGAAGAAAGAAAGAAGAAATAAGAAAGAAAATGAAAGAGGGAAAGAGTAGCATATGAATACAATTGTCTGCATATTCTGGGAGGTTGGAAACGCTTGTGTTAGCTCAGTTGAATACCGCATCATTCCTTGCCTTCCATAGGTTGTGAGCACAGGCAGCGAAGCATATCAACCATCCCAGCTTGAGGTGGCCCTGAGAAGAACCTAGGACTTCATCAACGAATTGGAGGATGTCAGTGCATTGGATTGCTATGGAATTTAGGCCGAGTTTTGTCCAGAGGGCCTCAGCCAGTTTGCAACGCAACACAATGTGGTCTGCTGATTCAATTGCTGGGCAGATGTTGCAGTGTGGGTCAGACGACCACTTTTGTGCGTTCTGTTGTTGTTGGAGTTTAACCTGTCTTTGAAGGCTAGCTAGAGGAAGATTCTGCAAGTATTTGGGATGGCTTTGAGCCATATGAATTCAGCCGGCTTCCATGATATGCCATGGAATGTGAGGAGTCTGTAAAATGCTGCGGTTGTTATTCCGTTGAGGGATTGAAGGCATGATCTTGTATCTGGTGCATCTGCATGTGGTTGAAGAGTTGCCAAAGTGTTCATGAGGAGGTTGAGTTCTGTCTGTGCCTGGTTTGATAACACTGGGTGGAGATTAATCGCTCAGGTGTTTTGTGTGAATTGTGAGGCGACTGTACAGTTGATGTTGGTTGCAAATGATGCCAGTGATGGGTAGGTGATGAAGAAGCAGCCGTCGTCCGTCCAATGGTCTTTCCAGAATTGCACCGCAAGGTCGCTTCCCAGCGAAACTTTGGTTGATGCTATTGTTGGTTCCAATGCTCCACAGATCATCTTCCAAACCGGTGTATCAGTTGGTCTTGCTAGGATAGGAATCTCGTTCTGCAGGTGCTGTGCTCTGAGCCAGTGGAAGCATGGCTCCGGGGAGCCAGATAGCAGCTTGCTTGCAAGTTTCATTAGTAGCGACAGGTTGTGAGCTTTGAGATCTCGTATGCCCAGTCCTCCCTCTTCTTTTGACATGGTGACAGTATCCCAGGCGAAAAGGCAATGACCTCCTACTAAACTGAGAAATAAACTAAAATTTCGGATGCTGAGCTTAGAGAAGTTTTCATGAATATCACTTCAAATGAGTATAGTTACTTCGAATGAGTATGTCACGCCTTTGCGGTGAACATATCTACTTGTTGCCTCCCAGGAAACAAAAATCATGCTGATTAATCAGATGTCAATTACTTCTTTGCAGTAAGCAGGAAATGTTGTTTGGCAAATAACTCTGTTCTTTAGGATCCTGCTTTTGGTGCACATGCCATGGTTCCAGATAAGATTGTCAAAGATGGACAAGCTTCACCTCATTCACAAACTGCATCAGTTTGGCTTAGGAATCACAAATACCTTGACGTTCAATGCCATCCATGAGGTGACTGTATCTTCTTTATTATTTCACATAAGATTGTTCAGAAATCAAGTAACTGTTGGGTTTTCAGCTCGCTGACCAATTTTGGACTTATGAAACAGGAGTGTCGACATATTATGGATCATGCAGTAATCTAAGAAGTTGAAATCTGGAAATGGGTGTGCATTATCATATTTAAAAATCTTCTCCTGCTGAACAATTGCCAGTTGCGGGATTCCTCTGTGCAGGTGGTATGTATTGTTTTGTTTTTTAAGTTAAGATCGAACTATAATATGTGTGCTTTTCTCAATGAAATGGTTTATTTGGTGCTTCTTT]




>consensus_4828#0
TGATTTCTCCTTCTCCGCCGCCGCCCAACCCTAACCCCCCATATCATCATCCGCGTCGTC
CTTCGTCGCTCCTCGGCTCAAGGGTTCAACTCGAACTCACGGCACAGGAGCATGAACACG
GCGACGGCGGCGGCAGAGGATAACGGCGGCGGCGGCGGCGGCAGAGCAACATGGCAGCGA
AAGGCAAGGAGAGCAAATACTAGGGTTCGAGCGAGTTGCCACTTGCCAGCCCCGATCCAT
CCCTCCTGATCCATCCAGTAGCAACGCGAAGTTACAATAATACCCTTCCAACCAAGTTGT
CTGGGCGGTACCGCATCAGGGACATTCTTGGTACCGGGAGGTACCAAACAATCCAGCCGT
TGGATCGGGCCAGATCCAACGGCCAGCATTCGGTACCGCCCGGTACCATTGGACGGTAAA
AACTCTCATCTATGTAAGGCAACTAAACAATACAGAGTGGAGAGATTTCAACCCAGAGAG
TTATTTTATGGTTATGTTCTCAAACCGGATCAAGAATTCCAATTTTTTATCACATAGGCA
AGCATGGTAGATATTTGTAAGAATCCATACATTTCCAGAAATATTTGATGTTAGAGCAAC
TGGGAGAGAGAAGTCATTAAAATATGTTTGTTCCCTTCTAACTGTACTTCTGACCGGACA
ATCAGTAAACCTCCCAAATTTCCTTGAGATGGTAAGAACACGAACTTGTTCAACTGAGCT
GGGTAGAAATTTTTAGTATATGTTGCCTCAATTGTTTTTCTTTGTTTCTTGAAGGCAGAT
GATGTTATAATTAGAATCACTGATTTTATTTTCTGATTGCATTCCACTTATCAGCAGAAT
GAATGCCTCTAACATTCCAACATGGAATATTGAAATTTTTGATTCATTGTCAATGCTTGT
TGTTCAGAATTAAAATTTCTGATATCTTTCAAAAGACCAGAAGTGAGCAGATTTTAGACA
GCTAGTGTGTCTTCCACAATTATGCATATAGGAGTGGACCAGAAGAAATAACATTGATGT
TATAAAGGATTCTCTGGATCTTGTACCTGTGGTAACATATGCTGGAGATACTGCATTTCA
GATTCACTGCTTGGAGCGATCAACATATACCCTTGAAAGTTCTGTACAAAGAAAGATGCA
TTGCATAGTGATATCTCGTGATCTAGCTTGTATAATTAAGTGAACGACAGATAAACGGTA
TACTCTTGAGAGGAGTTTTGTTCATTCCATATTATCTTTCTTTTGTGCAGTTATAGTTAT
TATATACTCTTATGGAATTATTTTGATTTATTATACTTCATTGCTTCGTCTGTATATTCT
GTTGTTTTTACCTTACAATTACAGGCCAAACTTCTTACTAAACTTCCTTTTTTTTACGCA
AAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTACATGG
CCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGAACGAA
GGAAGAAGATAGAAGAGAAAAAAGAAAGAAGAAAGAAAGAAGAAATAAGAAAGAAAATGA
AAGAGGGAAAGAGTAGCATATGAATACAATTGTCTGCATATTCTGGGAGGTTGGAAACGC
TTGTGTTAGCTCAGTTGAATACCGCATCATTCCTTGCCTTCCATAGGTTGTGAGCACAGG
CAGCGAAGCATATCAACCATCCCAGCTTGAGGTGGCCCTGAGAAGAACCTAGGACTTCAT
CAACGAATTGGAGGATGTCAGTGCATTGGATTGCTATGGAATTTAGGCCGAGTTTTGTCC
AGAGGGCCTCAGCCAGTTTGCAACGCAACACAATGTGGTCTGCTGATTCAATTGCTGGGC
AGATGTTGCAGTGTGGGTCAGACGACCACTTTTGTGCGTTCTGTTGTTGTTGGAGTTTAA
CCTGTCTTTGAAGGCTAGCTAGAGGAAGATTCTGCAAGTATTTGGGATGGCTTTGAGCCA
TATGAATTCAGCCGGCTTCCATGATATGCCATGGAATGTGAGGAGTCTGTAAAATGCTGC
GGTTGTTATTCCGTTGAGGGATTGAAGGCATGATCTTGTATCTGGTGCATCTGCATGTGG
TTGAAGAGTTGCCAAAGTGTTCATGAGGAGGTTGAGTTCTGTCTGTGCCTGGTTTGATAA
CACTGGGTGGAGATTAATCGCTCAGGTGTTTTGTGTGAATTGTGAGGCGACTGTACAGTT
GATGTTGGTTGCAAATGATGCCAGTGATGGGTAGGTGATGAAGAAGCAGCCGTCGTCCGT
CCAATGGTCTTTCCAGAATTGCACCGCAAGGTCGCTTCCCAGCGAAACTTTGGTTGATGC
TATTGTTGGTTCCAATGCTCCACAGATCATCTTCCAAACCGGTGTATCAGTTGGTCTTGC
TAGGATAGGAATCTCGTTCTGCAGGTGCTGTGCTCTGAGCCAGTGGAAGCATGGCTCCGG
GGAGCCAGATAGCAGCTTGCTTGCAAGTTTCATTAGTAGCGACAGGTTGTGAGCTTTGAG
ATCTCGTATGCCCAGTCCTCCCTCTTCTTTTGACATGGTGACAGTATCCCAGGCGAAAAG
GCAATGACCTCCTACTAAACTGAGAAATAAACTAAAATTTCGGATGCTGAGCTTAGAGAA
GTTTTCATGAATATCACTTCAAATGAGTATAGTTACTTCGAATGAGTATGTCACGCCTTT
GCGGTGAACATATCTACTTGTTGCCTCCCAGGAAACAAAAATCATGCTGATTAATCAGAT
GTCAATTACTTCTTTGCAGTAAGCAGGAAATGTTGTTTGGCAAATAACTCTGTTCTTTAG
GATCCTGCTTTTGGTGCACATGCCATGGTTCCAGATAAGATTGTCAAAGATGGACAAGCT
TCACCTCATTCACAAACTGCATCAGTTTGGCTTAGGAATCACAAATACCTTGACGTTCAA
TGCCATCCATGAGGTGACTGTATCTTCTTTATTATTTCACATAAGATTGTTCAGAAATCA
AGTAACTGTTGGGTTTTCAGCTCGCTGACCAATTTTGGACTTATGAAACAGGAGTGTCGA
CATATTATGGATCATGCAGTAATCTAAGAAGTTGAAATCTGGAAATGGGTGTGCATTATC
ATATTTAAAAATCTTCTCCTGCTGAACAATTGCCAGTTGCGGGATTCCTCTGTGCAGGTG
GTATGTATTGTTTTGTTTTTTAAGTTAAGATCGAACTATAATATGTGTGCTTTTCTCAAT
GAAATGGTTTATTTGGTGCTTCTTT

consensusID : consensus_4828#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 755
fasta sequence

                              [ATCCCTTCTCCTAGCCCCGTCGTCCGCGCGGGCGGCGAGACGACTTTAGGGTTTAGGAGGGCGGCCCCCTGGGGCTCCGCCGCGACCTCCTTCGACGACGGGTGCCGGTCCGACGCCGGCGCGGCCGACCCCGTTAGCCTCCGCCTCGGCCGTGCGCGTGGGGGCGAGGGCCGAGGGCCGCGCTCCCCACGGTCGGCCCCGCGGAGCCGGCGGGGGGCGACGCGACCGCGACCACGGCGAGGGCCGCTCCTGGCGGCTGATTCCAGGGTCTGCGCCGCGCTGAATCCGAGCAGGGTTCTCCGCTATTCTTGCGAGAAGATGATAGGGTTTTCCTCTTTTGCGCCTCTCTGGATTGTGATGCACTGAGGGATCATGGGATGAGCAAACTACAAACTCGGGCACGAAAGGGATTGATAGGATGAGGATCAGCTCAAGAATGAGGAGTGGACCAGAAGAAATAACATTGATGTTATGATGGATTCTCTGGATCTTGTACCTGTGGTAACAGATGCTGGAGATACTGCATTTCAGATTCACTGCTTGGAGCGATCAGCATATGCTTCTGTGTTAAGAATTTTTTTTGCTATGTCAAAACTCCTCTCAAGGAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGAACGAGCGAAGAAGATAGAAGAGAAAAAAAAATAGA]

[+] EMBL CB632662             [ATCCCTTCTCCTAGCCCCGTCGTCCGCGCGGGCGGCGAGACGACTTTAGGGTTTAGGAGGGCGGCCCCCTGGGGCTCCGCCGCGACCTCCTTCGACGACGGGTGCCGGTCCGACGCCGGCGCGGCCGACCCCGTTAGCCTCCGCCTCGGCCGTGCGCGTGGGGGCGAGGGCCGAGGGCCGCGCTCCCCACGGTCGGCCCCGCGGAGCCGGCGGGGGGCGACGCGACCGCGACCACGGCGAGGGCCGCTCCTGGCGGCTGATTCCAGGGTCTGCGCCGCGCTGAATCCGAGCAGGGTTCTCCGCTATTCTTGCGAGAAGATGATAGGGTTTTCCTCTTTTGCGCCTCTCTGGATTGTGATGCACTGAGGGATCATGGGATGAGCAAACTACAAACTCGGGCACGAAAGGGATTGATAGGATGAGGATCAGCTCAAGAATGAGGAGTGGACCAGAAGAAATAACATTGATGTTATGATGGATTCTCTGGATCTTGTACCTGTGGTAACAGATGCTGGAGATACTGCATTTCAGATTCACTGCTTGGAGCGATCAGCATATGCTTCTGTGTTAAGAATTTTTTTTGCTATGTCAAAACTCCTCTCAAGGAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGAACGAGCGAAGAA                       ]
[-] EMBL CB632661             [                                                                                                        CCGGTCCGACGCCGGCGCGGCCGACCCCGTTAGCCTCCGCCTCGGCCGTGCGCGTGGGGGCGAGGGCCGAGGGCCGCGCTCCCCACGGTCGGCCCCGCGGAGCCGGCGGGGGGCGACGCGACCGCGACCACGGCGAGGGCCGCTCCTGGCGGCTGATTCCAGGGTCTGCGCCGCGCTGAATCCGAGCAGGGTTCTCCGCTATTCTTGCGAGAAGATGATAGGGTTTTCCTCTTTTGCGCCTCTCTGGATTGTGATGCACTGAGGGATCATGGGATGAGCAAACTACAAACTCGGGCACGAAAGGGATTGATAGGATGAGGATCAGCTCAAGAATGAGGAGTGGACCAGAAGAAATAACATTGATGTTATGATGGATTCTCTGGATCTTGTACCTGTGGTAACAGATGCTGGAGATACTGCATTTCAGATTCACTGCTTGGAGCGATCAGCATATGCTTCTGTGTTAAGAATTTTTTTTGCTATGTCAAAACTCCTCTCAAGGAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGAACGAGCGAAGAAGATAGAAGAGAAAAAAAAATAGA]




>consensus_4828#1
ATCCCTTCTCCTAGCCCCGTCGTCCGCGCGGGCGGCGAGACGACTTTAGGGTTTAGGAGG
GCGGCCCCCTGGGGCTCCGCCGCGACCTCCTTCGACGACGGGTGCCGGTCCGACGCCGGC
GCGGCCGACCCCGTTAGCCTCCGCCTCGGCCGTGCGCGTGGGGGCGAGGGCCGAGGGCCG
CGCTCCCCACGGTCGGCCCCGCGGAGCCGGCGGGGGGCGACGCGACCGCGACCACGGCGA
GGGCCGCTCCTGGCGGCTGATTCCAGGGTCTGCGCCGCGCTGAATCCGAGCAGGGTTCTC
CGCTATTCTTGCGAGAAGATGATAGGGTTTTCCTCTTTTGCGCCTCTCTGGATTGTGATG
CACTGAGGGATCATGGGATGAGCAAACTACAAACTCGGGCACGAAAGGGATTGATAGGAT
GAGGATCAGCTCAAGAATGAGGAGTGGACCAGAAGAAATAACATTGATGTTATGATGGAT
TCTCTGGATCTTGTACCTGTGGTAACAGATGCTGGAGATACTGCATTTCAGATTCACTGC
TTGGAGCGATCAGCATATGCTTCTGTGTTAAGAATTTTTTTTGCTATGTCAAAACTCCTC
TCAAGGAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAATGGTTTA
CATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTAAAGGGGA
ACGAGCGAAGAAGATAGAAGAGAAAAAAAAATAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4828#0      TGATTTCTCCTTCTCCGCCGCCGCCCAACCCTAACCCCCCATATCATCATCCGCGTCGTC 60
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CTTCGTCGCTCCTCGGCTCAAGGGTTCAACTCGAACTCACGGCACAGGAGCATGAACACG 120
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GCGACGGCGGCGGCAGAGGATAACGGCGGCGGCGGCGGCGGCAGAGCAACATGGCAGCGA 180
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      AAGGCAAGGAGAGCAAATACTAGGGTTCGAGCGAGTTGCCACTTGCCAGCCCCGATCCAT 240
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CCCTCCTGATCCATCCAGTAGCAACGCGAAGTTACAATAATACCCTTCCAACCAAGTTGT 300
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CTGGGCGGTACCGCATCAGGGACATTCTTGGTACCGGGAGGTACCAAACAATCCAGCCGT 360
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TGGATCGGGCCAGATCCAACGGCCAGCATTCGGTACCGCCCGGTACCATTGGACGGTAAA 420
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      AACTCTCATCTATGTAAGGCAACTAAACAATACAGAGTGGAGAGATTTCAACCCAGAGAG 480
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TTATTTTATGGTTATGTTCTCAAACCGGATCAAGAATTCCAATTTTTTATCACATAGGCA 540
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      AGCATGGTAGATATTTGTAAGAATCCATACATTTCCAGAAATATTTGATGTTAGAGCAAC 600
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TGGGAGAGAGAAGTCATTAAAATATGTTTGTTCCCTTCTAACTGTACTTCTGACCGGACA 660
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      ATCAGTAAACCTCCCAAATTTCCTTGAGATGGTAAGAACACGAACTTGTTCAACTGAGCT 720
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GGGTAGAAATTTTTAGTATATGTTGCCTCAATTGTTTTTCTTTGTTTCTTGAAGGCAGAT 780
consensus_4828#1      -----------------ATCCCTTCTCCTAGCC--CCGTCGTCCGCGCGGGCGGCGAGAC 41
                                       **   **  *  *        ** *     *  *  *  *** 

consensus_4828#0      GATGTTATAATTAGAATCACTGATTTTATTTTCTGATTGCATTCC-ACTTATCAGCAGAA 839
consensus_4828#1      GACTTTAGGGTTTAGGAGGGCGGCCC---CCTGGGGCTCCGCCGCGACCTCCTTCGACGA 98
                      **  ***   **         *         *  *  * *    * ** *      *  *

consensus_4828#0      TGAATGCCTCTAACATTCCAACATGGAATATTGAAATTTTTGATTCATTGTCAATGCTTG 899
consensus_4828#1      CGGGTGCCGGTCCGACGCCGGCGCGGCCGACCCCGTTAGCCTCCGCCTCGGCCGTGCGCG 158
                       *  ****  *   *  **  *  **   *      *        * * * *  ***  *

consensus_4828#0      TTGT--TCAGAATTAAAATTTCTGATATCTTTCAAAAGACCAGAAGTGAGCAGATTTTAG 957
consensus_4828#1      TGGGGGCGAGGGCCGAGGGCCGCGCTCCCCACGGTCGGCCCCGCGG--AGCCGGCGGGGG 216
                      * *     **     *       * *  *        * ** *  *  *** *      *

consensus_4828#0      ACA--GCTAGTGTGTCTTCCACAATTAT-GCATATAGGAGTGGACCAGAAGAAATA---- 1010
consensus_4828#1      GCGACGCGACCGCGACCACGGCGAGGGCCGCTCCTGGCGGCTGATTCCAGGGTCTGCGCC 276
                       *   ** *  * * *  *  * *     **   * *  *  **    * *   *     

consensus_4828#0      ACATTGATGTTATAAAGGATTCTCTGGATCTTGTACCTGTGGTAACATATGCTGGAGATA 1070
consensus_4828#1      GCGCTGAATCCGAGCAGGGTTCTCCG----CTATTCTTGCGAGAAGATG-ATAGGGTTTT 331
                       *  ***        *** ***** *     * * * ** *  ** **     **   * 

consensus_4828#0      CTGCATTTCAGATTCACTGCTTGGAGCGATCAACATATACCCTTGAAAGTTCTG--TACA 1128
consensus_4828#1      CCTCTTTTGCGCCTCTCTGGATTGTGATGCACTGAGGGATCATGGGATGAGCAAACTACA 391
                      *  * ***  *  ** ***  * * *        *   * * * * * *  *    ****

consensus_4828#0      AAGAAAGATGCATTGCATAGTGATATCTCGTGATCTAGCTTGTATAATTAAGTGAACGAC 1188
consensus_4828#1      AACTCGGGCACGAAAGGGATTGATAGGATGAGGATCAGCTCA-AGAATGAGGAGTGGACC 450
                      **    *   *       * *****    * *    ****   * *** * * *     *

consensus_4828#0      AGATAAACGGTATACTCTTGAGAGGAGTTTTGTTCATTCCATATTATCTTTCTTTTGTGC 1248
consensus_4828#1      AGAAGAA----ATAACATTGA---------TGTT-ATGATGGATTCTCTGGATCTTGTAC 496
                      ***  **    ***   ****         **** **     *** ***   * **** *

consensus_4828#0      AGTTATAGTTATTATATACTCTTATGGAATTATTTTGATTTATTATACTTCATTGCTTCG 1308
consensus_4828#1      --CTGTGGTAAC-AGATGCT-----GGAGATACTGCATTTCA----GATTCACTGCTTGG 544
                         * * ** *  * ** **     ***  ** *    ** *      **** ***** *

consensus_4828#0      TCTGTATATTCTGTTGTTTTTACCTTACAATTACAGGCCAAACTTCTTACTAAACTTCCT 1368
consensus_4828#1      AGCGATCAGCATATGCTTCTGTGTTAAGAATT----------TTTTTTGCTATGTCAAAA 594
                         *   *   * *  ** *    * * ****           ** ** ***        

consensus_4828#0      TTTTTTTACGCAAAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAA 1428
consensus_4828#1      CTCCTCT-CAAGGAAGGTAGAGAGGCTCTACCTTATTACCATTGTATTAATGGTGGTCAA 653
                       *  * * *    ***********************************************

consensus_4828#0      TGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTA 1488
consensus_4828#1      TGGTTTACATGGCCAAGTGGCCAATTACAAAAGGAAAGGAAGAGAGAAAATACAGAGGTA 713
                      ************************************************************

consensus_4828#0      AAGGGGAACGAAGGAAGAAGATAGAAGAGAAAAAAGAAAGAAGAAAGAAAGAAGAAATAA 1548
consensus_4828#1      AAGGGGAACGAGCGAAGAAGATAGAAGAGAAAAAAAAATAGA------------------ 755
                      ***********  ********************** **   *                  

consensus_4828#0      GAAAGAAAATGAAAGAGGGAAAGAGTAGCATATGAATACAATTGTCTGCATATTCTGGGA 1608
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GGTTGGAAACGCTTGTGTTAGCTCAGTTGAATACCGCATCATTCCTTGCCTTCCATAGGT 1668
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TGTGAGCACAGGCAGCGAAGCATATCAACCATCCCAGCTTGAGGTGGCCCTGAGAAGAAC 1728
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CTAGGACTTCATCAACGAATTGGAGGATGTCAGTGCATTGGATTGCTATGGAATTTAGGC 1788
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CGAGTTTTGTCCAGAGGGCCTCAGCCAGTTTGCAACGCAACACAATGTGGTCTGCTGATT 1848
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CAATTGCTGGGCAGATGTTGCAGTGTGGGTCAGACGACCACTTTTGTGCGTTCTGTTGTT 1908
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GTTGGAGTTTAACCTGTCTTTGAAGGCTAGCTAGAGGAAGATTCTGCAAGTATTTGGGAT 1968
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GGCTTTGAGCCATATGAATTCAGCCGGCTTCCATGATATGCCATGGAATGTGAGGAGTCT 2028
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GTAAAATGCTGCGGTTGTTATTCCGTTGAGGGATTGAAGGCATGATCTTGTATCTGGTGC 2088
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      ATCTGCATGTGGTTGAAGAGTTGCCAAAGTGTTCATGAGGAGGTTGAGTTCTGTCTGTGC 2148
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CTGGTTTGATAACACTGGGTGGAGATTAATCGCTCAGGTGTTTTGTGTGAATTGTGAGGC 2208
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GACTGTACAGTTGATGTTGGTTGCAAATGATGCCAGTGATGGGTAGGTGATGAAGAAGCA 2268
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GCCGTCGTCCGTCCAATGGTCTTTCCAGAATTGCACCGCAAGGTCGCTTCCCAGCGAAAC 2328
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TTTGGTTGATGCTATTGTTGGTTCCAATGCTCCACAGATCATCTTCCAAACCGGTGTATC 2388
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      AGTTGGTCTTGCTAGGATAGGAATCTCGTTCTGCAGGTGCTGTGCTCTGAGCCAGTGGAA 2448
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GCATGGCTCCGGGGAGCCAGATAGCAGCTTGCTTGCAAGTTTCATTAGTAGCGACAGGTT 2508
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GTGAGCTTTGAGATCTCGTATGCCCAGTCCTCCCTCTTCTTTTGACATGGTGACAGTATC 2568
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CCAGGCGAAAAGGCAATGACCTCCTACTAAACTGAGAAATAAACTAAAATTTCGGATGCT 2628
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GAGCTTAGAGAAGTTTTCATGAATATCACTTCAAATGAGTATAGTTACTTCGAATGAGTA 2688
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TGTCACGCCTTTGCGGTGAACATATCTACTTGTTGCCTCCCAGGAAACAAAAATCATGCT 2748
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GATTAATCAGATGTCAATTACTTCTTTGCAGTAAGCAGGAAATGTTGTTTGGCAAATAAC 2808
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TCTGTTCTTTAGGATCCTGCTTTTGGTGCACATGCCATGGTTCCAGATAAGATTGTCAAA 2868
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GATGGACAAGCTTCACCTCATTCACAAACTGCATCAGTTTGGCTTAGGAATCACAAATAC 2928
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CTTGACGTTCAATGCCATCCATGAGGTGACTGTATCTTCTTTATTATTTCACATAAGATT 2988
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GTTCAGAAATCAAGTAACTGTTGGGTTTTCAGCTCGCTGACCAATTTTGGACTTATGAAA 3048
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      CAGGAGTGTCGACATATTATGGATCATGCAGTAATCTAAGAAGTTGAAATCTGGAAATGG 3108
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GTGTGCATTATCATATTTAAAAATCTTCTCCTGCTGAACAATTGCCAGTTGCGGGATTCC 3168
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      TCTGTGCAGGTGGTATGTATTGTTTTGTTTTTTAAGTTAAGATCGAACTATAATATGTGT 3228
consensus_4828#1      ------------------------------------------------------------
                                                                                  

consensus_4828#0      GCTTTTCTCAATGAAATGGTTTATTTGGTGCTTCTTT 3265
consensus_4828#1      -------------------------------------