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Oryza sativa
cluster # 4842 cluster # 4842       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4842#0 length = 2202 sequences # 2  
 consensus_4842#1 length = 560 sequences # 1  
consensusID : consensus_4842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2202
fasta sequence 
                              [ACCCACCCGCGCCCCAAATCACGAGGAGGCGAAGCCGCCCATCTCATCGCCGGAGCTCGCGAATTCGCCGCCGCGATTCCGACCACCGCCGCGCCGGCGCCCGCGCCCGCTACGGTACTCCGCCGCCGTGCTGAGATCGCCGGGGGAGCCATGTCGCGGTCCCTGAGCATGAGGTCGTCGATGAGCATGAGGTCGCGCCGCGACCTGCCTCCTCCCCAGCAGACAATCGAAAAGCTTGAGAATATGGTGGCTGAAGGAAATTATTATGAAGCCCAACAAATGTACAAGTCAACCGGTGCAAGGTATATTGCTGCTCAGAAGTATTTGGAAGCCTTGGACATCCTTCAGTCAGGAGCTTTAGTTCAACTGAAGCATGGGCAGGTTCTATCAAAGCTAAATTTCATAGATCTAAGTAAAAAAAAAATATTCGCTACATTTGATGGCAAAGTAACACCCCTCCCAAAAGAAAAGAGAAGAGAGAGCCAACCAAAAGCTCATTGCTCCCTTCGTAACGATTTGTTGCAACCAGCCAATGGACCTTGACGTGTTCATTTGAAGTTGTTTTTTTAATGTGTGTATTGTCGATGTGGTGGTAGTGATTCACATCTTATTATGGGATGTTTTTATTGGGTGCTATGCTGTAGTTACATACATGTGTTATCCTAGATTGGTGTTTTATATCATTTTAAACCTTCACATTTTTGCCTTATTGGTTAAAAATTCCTGATTTCAGGTAACTTGTGGTGGTGAACTTGCTATAATGTTTGTGGACACCCTTGTCAAGGCAGCGCTTCCTTATAATGAAGAAACCTTTGATCGTATCAGAAAGATGTACGACGCCTTCCCCAGGATATCTGTTCCACACTTCCTTGGAGATGATTATGATGACGACGGGCAGAAATTATCCGAAGCTATTTCTGCAGCAAAAGTGCGTTCTGAGAGTTGTTCATCATTCCTGAGAGCTGCTATCAGGTGGTCTGCTGAGGTTGGGGCATCAAGAAGTGGATCTCCTGAGCTGCATGTTATGTTGGCGGAATACATATATTCTGAATCTCCAGAAACGGACATGACTAAAGTGTCAAGTCATTTTGTGAGGGGAAATGATCCTAAAAAGTTTGCCTCTATGCTGGCGAACTTTATGGGAAAGGTAATGGTTTTTAGAAAATAATTGATAATAGACTTGCAGCTGATGATTGTCTAATGCCAAATTCTATTGAACTGTTACATTCTTCTGTTCTCTGAGCAATGATTAAAATGTCTTATCTGAATATGATCAGTAGGTTCACATTCTTTACAACAATTTTCATTTTACAACGGGTCTCTTGCTTATAGTTTTTATTTGAGTTGGAGGTCATCCTTCTCCGAAAATAGAAACACGGTGCCAGCAAGTGATTGTTCAATCAGTTATCTATATCCATTTTTGGGTTGGATTATTTCAAGACCAACATAATCTTCGTGTAAAGCAGTATTCATAGATGTTTTTTCTCAATCAAAAAAATATTTTTATTAATATTTTTCTTACTGCACAGTGCTACCCTGGTGAAGATGATACTGCAATAGCACGTGGTGTCCTAATGTATCTATCACAAGGGAATCTTAGGGATGCAAATTTGCTCATGGACGAGCTGAAGGATCAACTAAAATCTGCTGACTTGGAAATCCCCAAAACAGATTTAATTCAGTTCATCAAGTATCTCTTACCGACGCTCGAAAGAGATGCTTACCCTCTTTTCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCACGACCCTGTATTTGAGGAGTTATTAGATGAAATAGCCGCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCACAAAGCTCCCGACGCGCATTTCGTTCGCTAATACAAATTGCTGCTGGAAGATGAACACCCGGCCCGGCCCGAAAAGAGCATAAGAAAAAGTTCTGTTGCTGCCTTCCTCAGCCTTGATTATCCTGAGGCCATACATTTAGCTCCAAACTGCATATGATGATATATGCTCCAGTTACCACTGATCTCTTGTAAAACCATTCAACTGTTTTGCTCGTATCATGGTCGTGTTCTAATGATATTACTATTCTTTAACATTTTTTGTAGTTCCAGTTTTGCAGTTTTAAAACGG]

[+] EMBL AK066699             [ACCCACCCGCGCCCCAAATCACGAGGAGGCGAAGCCGCCCATCTCATCGCCGGAGCTCGCGAATTCGCCGCCGCGATTCCGACCACCGCCGCGCCGGCGCCCGCGCCCGCTACGGTACTCCGCCGCCGTGCTGAGATCGCCGGGGGAGCCATGTCGCGGTCCCTGAGCATGAGGTCGTCGATGAGCATGAGGTCGCGCCGCGACCTGCCTCCTCCCCAGCAGACAATCGAAAAGCTTGAGAATATGGTGGCTGAAGGAAATTATTATGAAGCCCAACAAATGTACAAGTCAACCGGTGCAAGGTATATTGCTGCTCAGAAGTATTTGGAAGCCTTGGACATCCTTCAGTCAGGAGCTTTAGTTCAACTGAAGCATGGGCAGGTTCTATCAAAGCTAAATTTCATAGATCTAAGTAAAAAAAAAATATTCGCTACATTTGATGGCAAAGTAACACCCCTCCCAAAAGAAAAGAGAAGAGAGAGCCAACCAAAAGCTCATTGCTCCCTTCGTAACGATTTGTTGCAACCAGCCAATGGACCTTGACGTGTTCATTTGAAGTTGTTTTTTTAATGTGTGTATTGTCGATGTGGTGGTAGTGATTCACATCTTATTATGGGATGTTTTTATTGGGTGCTATGCTGTAGTTACATACATGTGTTATCCTAGATTGGTGTTTTATATCATTTTAAACCTTCACATTTTTGCCTTATTGGTTAAAAATTCCTGATTTCAGGTAACTTGTGGTGGTGAACTTGCTATAATGTTTGTGGACACCCTTGTCAAGGCAGCGCTTCCTTATAATGAAGAAACCTTTGATCGTATCAGAAAGATGTACGACGCCTTCCCCAGGATATCTGTTCCACACTTCCTTGGAGATGATTATGATGACGACGGGCAGAAATTATCCGAAGCTATTTCTGCAGCAAAAGTGCGTTCTGAGAGTTGTTCATCATTCCTGAGAGCTGCTATCAGGTGGTCTGCTGAGGTTGGGGCATCAAGAAGTGGATCTCCTGAGCTGCATGTTATGTTGGCGGAATACATATATTCTGAATCTCCAGAAACGGACATGACTAAAGTGTCAAGTCATTTTGTGAGGGGAAATGATCCTAAAAAGTTTGCCTCTATGCTGGCGAACTTTATGGGAAAGGTAATGGTTTTTAGAAAATAATTGATAATAGACTTGCAGCTGATGATTGTCTAATGCCAAATTCTATTGAACTGTTACATTCTTCTGTTCTCTGAGCAATGATTAAAATGTCTTATCTGAATATGATCAGTAGGTTCACATTCTTTACAACAATTTTCATTTTACAACGGGTCTCTTGCTTATAGTTTTTATTTGAGTTGGAGGTCATCCTTCTCCGAAAATAGAAACACGGTGCCAGCAAGTGATTGTTCAATCAGTTATCTATATCCATTTTTGGGTTGGATTATTTCAAGACCAACATAATCTTCGTGTAAAGCAGTATTCATAGATGTTTTTTCTCAATCAAAAAAATATTTTTATTAATATTTTTCTTACTGCACAGTGCTACCCTGGTGAAGATGATACTGCAATAGCACGTGGTGTCCTAATGTATCTATCACAAGGGAATCTTAGGGATGCAAATTTGCTCATGGACGAGCTGAAGGATCAACTAAAATCTGCTGACTTGGAAATCCCCAAAACAGATTTAATTCAGTTCATCAAGTATCTCTTACCGACGCTCGAAAGAGATGCTTACCCTCTTTTCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCACGACCCTGTATTTGAGGAGTTATTAGATGAAATAGCCGCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCACAAAGCTCCCGACGCGCATTTCGTTCGCTAATACAAATTGCTGCTGGAAGATGAACACCCGGCCCGGCCCGAAAAGAGCATAAGAAAAAGTTCTGTTGCTGCCTTCCTCAGCCTTGATTATCCTGAGGCCATACATTTAGCTCCAAACTGCATATGATGATATATGCTCCAGTTACCACTGATCTCTTGTAAAACCATTCAACTGTTTTGCTCGTATCATGGTCGTGTTCTAATGATATTACTATTCTTTAACATTTTTTGTAGTTCCAGTTTTGCAGTTTTAAAACGG]
[+] EMBL AA750105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTAGATGAAATAGCCGCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTATAATNATGAGAAAAGGATTTCGTCATAAATATTCCAGCACAAAGCT CCGACNCGCATTTCG TCGCTAATACAAA TGCTACTGGAAGA GAACA CCGGCCCGAACCGAAA                                                                                                                                                                                                                       ]




>consensus_4842#0
ACCCACCCGCGCCCCAAATCACGAGGAGGCGAAGCCGCCCATCTCATCGCCGGAGCTCGC
GAATTCGCCGCCGCGATTCCGACCACCGCCGCGCCGGCGCCCGCGCCCGCTACGGTACTC
CGCCGCCGTGCTGAGATCGCCGGGGGAGCCATGTCGCGGTCCCTGAGCATGAGGTCGTCG
ATGAGCATGAGGTCGCGCCGCGACCTGCCTCCTCCCCAGCAGACAATCGAAAAGCTTGAG
AATATGGTGGCTGAAGGAAATTATTATGAAGCCCAACAAATGTACAAGTCAACCGGTGCA
AGGTATATTGCTGCTCAGAAGTATTTGGAAGCCTTGGACATCCTTCAGTCAGGAGCTTTA
GTTCAACTGAAGCATGGGCAGGTTCTATCAAAGCTAAATTTCATAGATCTAAGTAAAAAA
AAAATATTCGCTACATTTGATGGCAAAGTAACACCCCTCCCAAAAGAAAAGAGAAGAGAG
AGCCAACCAAAAGCTCATTGCTCCCTTCGTAACGATTTGTTGCAACCAGCCAATGGACCT
TGACGTGTTCATTTGAAGTTGTTTTTTTAATGTGTGTATTGTCGATGTGGTGGTAGTGAT
TCACATCTTATTATGGGATGTTTTTATTGGGTGCTATGCTGTAGTTACATACATGTGTTA
TCCTAGATTGGTGTTTTATATCATTTTAAACCTTCACATTTTTGCCTTATTGGTTAAAAA
TTCCTGATTTCAGGTAACTTGTGGTGGTGAACTTGCTATAATGTTTGTGGACACCCTTGT
CAAGGCAGCGCTTCCTTATAATGAAGAAACCTTTGATCGTATCAGAAAGATGTACGACGC
CTTCCCCAGGATATCTGTTCCACACTTCCTTGGAGATGATTATGATGACGACGGGCAGAA
ATTATCCGAAGCTATTTCTGCAGCAAAAGTGCGTTCTGAGAGTTGTTCATCATTCCTGAG
AGCTGCTATCAGGTGGTCTGCTGAGGTTGGGGCATCAAGAAGTGGATCTCCTGAGCTGCA
TGTTATGTTGGCGGAATACATATATTCTGAATCTCCAGAAACGGACATGACTAAAGTGTC
AAGTCATTTTGTGAGGGGAAATGATCCTAAAAAGTTTGCCTCTATGCTGGCGAACTTTAT
GGGAAAGGTAATGGTTTTTAGAAAATAATTGATAATAGACTTGCAGCTGATGATTGTCTA
ATGCCAAATTCTATTGAACTGTTACATTCTTCTGTTCTCTGAGCAATGATTAAAATGTCT
TATCTGAATATGATCAGTAGGTTCACATTCTTTACAACAATTTTCATTTTACAACGGGTC
TCTTGCTTATAGTTTTTATTTGAGTTGGAGGTCATCCTTCTCCGAAAATAGAAACACGGT
GCCAGCAAGTGATTGTTCAATCAGTTATCTATATCCATTTTTGGGTTGGATTATTTCAAG
ACCAACATAATCTTCGTGTAAAGCAGTATTCATAGATGTTTTTTCTCAATCAAAAAAATA
TTTTTATTAATATTTTTCTTACTGCACAGTGCTACCCTGGTGAAGATGATACTGCAATAG
CACGTGGTGTCCTAATGTATCTATCACAAGGGAATCTTAGGGATGCAAATTTGCTCATGG
ACGAGCTGAAGGATCAACTAAAATCTGCTGACTTGGAAATCCCCAAAACAGATTTAATTC
AGTTCATCAAGTATCTCTTACCGACGCTCGAAAGAGATGCTTACCCTCTTTTCAGGACAC
TGCGGCAGAAGTACAAGACAAGTACAGATCACGACCCTGTATTTGAGGAGTTATTAGATG
AAATAGCCGCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTG
ATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCACAAAGCT
CCCGACGCGCATTTCGTTCGCTAATACAAATTGCTGCTGGAAGATGAACACCCGGCCCGG
CCCGAAAAGAGCATAAGAAAAAGTTCTGTTGCTGCCTTCCTCAGCCTTGATTATCCTGAG
GCCATACATTTAGCTCCAAACTGCATATGATGATATATGCTCCAGTTACCACTGATCTCT
TGTAAAACCATTCAACTGTTTTGCTCGTATCATGGTCGTGTTCTAATGATATTACTATTC
TTTAACATTTTTTGTAGTTCCAGTTTTGCAGTTTTAAAACGG

consensusID : consensus_4842#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 560
fasta sequence 
                              [CGCGGTCCGAGGACACTGCGGCAGTAAGTGTCCTGAAAAGAGGCGTAAGCGATCTCTTGTTCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCGCGACCCTGTATTTGAGGAGTTATTAGATGANAATAGCCGCCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCACTAAAGCTCCCGACGCGCATTTCGTTCGCTAATATAAATTGCTGCTGGAAGATGAACACCCGGCCCGGCCCGAAAAGAGCATAAGAAAAAGTTCTGTCTGCTCGCCTTCCTCAGCCTTGATTATCCTGAGGCCATACATTTAGCTCCAACTGCATATGATGATATATGCTCCCAGTTACCACTGATCTCTTGTAAAACCATTCAACTGTTTTGCTTGTATCATGGTCGTGTTCTAACGATATTACTATTCCTTTAACATNTTGTTGTAGTTCCAGTTCTTCAGTTTTAACAATGGCACTTTATCCTGACTAAAAAA]

[+] EMBL BQ907929             [CGCGGTCCGAGGACACTGCGGCAGTAAGTGTCCTGAAAAGAGGCGTAAGCGATCTCTTGTTCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCGCGACCCTGTATTTGAGGAGTTATTAGATGANAATAGCCGCCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGGTGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCACTAAAGCTCCCGACGCGCATTTCGTTCGCTAATATAAATTGCTGCTGGAAGATGAACACCCGGCCCGGCCCGAAAAGAGCATAAGAAAAAGTTCTGTCTGCTCGCCTTCCTCAGCCTTGATTATCCTGAGGCCATACATTTAGCTCCAACTGCATATGATGATATATGCTCCCAGTTACCACTGATCTCTTGTAAAACCATTCAACTGTTTTGCTTGTATCATGGTCGTGTTCTAACGATATTACTATTCCTTTAACATNTTGTTGTAGTTCCAGTTCTTCAGTTTTAACAATGGCACTTTATCCTGACTAAAAAA]




>consensus_4842#1
CGCGGTCCGAGGACACTGCGGCAGTAAGTGTCCTGAAAAGAGGCGTAAGCGATCTCTTGT
TCAGGACACTGCGGCAGAAGTACAAGACAAGTACAGATCGCGACCCTGTATTTGAGGAGT
TATTAGATGANAATAGCCGCCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGG
ACTTTTTGGTGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCC
AGCACTAAAGCTCCCGACGCGCATTTCGTTCGCTAATATAAATTGCTGCTGGAAGATGAA
CACCCGGCCCGGCCCGAAAAGAGCATAAGAAAAAGTTCTGTCTGCTCGCCTTCCTCAGCC
TTGATTATCCTGAGGCCATACATTTAGCTCCAACTGCATATGATGATATATGCTCCCAGT
TACCACTGATCTCTTGTAAAACCATTCAACTGTTTTGCTTGTATCATGGTCGTGTTCTAA
CGATATTACTATTCCTTTAACATNTTGTTGTAGTTCCAGTTCTTCAGTTTTAACAATGGC
ACTTTATCCTGACTAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4842#0      ACCCACCCGCGCCCCAAATCACGAGGAGGCGAAGCCGCCCATCTCATCGCCGGAGCTCGC 60
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      GAATTCGCCGCCGCGATTCCGACCACCGCCGCGCCGGCGCCCGCGCCCGCTACGGTACTC 120
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      CGCCGCCGTGCTGAGATCGCCGGGGGAGCCATGTCGCGGTCCCTGAGCATGAGGTCGTCG 180
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      ATGAGCATGAGGTCGCGCCGCGACCTGCCTCCTCCCCAGCAGACAATCGAAAAGCTTGAG 240
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      AATATGGTGGCTGAAGGAAATTATTATGAAGCCCAACAAATGTACAAGTCAACCGGTGCA 300
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      AGGTATATTGCTGCTCAGAAGTATTTGGAAGCCTTGGACATCCTTCAGTCAGGAGCTTTA 360
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      GTTCAACTGAAGCATGGGCAGGTTCTATCAAAGCTAAATTTCATAGATCTAAGTAAAAAA 420
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      AAAATATTCGCTACATTTGATGGCAAAGTAACACCCCTCCCAAAAGAAAAGAGAAGAGAG 480
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      AGCCAACCAAAAGCTCATTGCTCCCTTCGTAACGATTTGTTGCAACCAGCCAATGGACCT 540
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TGACGTGTTCATTTGAAGTTGTTTTTTTAATGTGTGTATTGTCGATGTGGTGGTAGTGAT 600
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TCACATCTTATTATGGGATGTTTTTATTGGGTGCTATGCTGTAGTTACATACATGTGTTA 660
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TCCTAGATTGGTGTTTTATATCATTTTAAACCTTCACATTTTTGCCTTATTGGTTAAAAA 720
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TTCCTGATTTCAGGTAACTTGTGGTGGTGAACTTGCTATAATGTTTGTGGACACCCTTGT 780
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      CAAGGCAGCGCTTCCTTATAATGAAGAAACCTTTGATCGTATCAGAAAGATGTACGACGC 840
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      CTTCCCCAGGATATCTGTTCCACACTTCCTTGGAGATGATTATGATGACGACGGGCAGAA 900
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      ATTATCCGAAGCTATTTCTGCAGCAAAAGTGCGTTCTGAGAGTTGTTCATCATTCCTGAG 960
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      AGCTGCTATCAGGTGGTCTGCTGAGGTTGGGGCATCAAGAAGTGGATCTCCTGAGCTGCA 1020
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TGTTATGTTGGCGGAATACATATATTCTGAATCTCCAGAAACGGACATGACTAAAGTGTC 1080
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      AAGTCATTTTGTGAGGGGAAATGATCCTAAAAAGTTTGCCTCTATGCTGGCGAACTTTAT 1140
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      GGGAAAGGTAATGGTTTTTAGAAAATAATTGATAATAGACTTGCAGCTGATGATTGTCTA 1200
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      ATGCCAAATTCTATTGAACTGTTACATTCTTCTGTTCTCTGAGCAATGATTAAAATGTCT 1260
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TATCTGAATATGATCAGTAGGTTCACATTCTTTACAACAATTTTCATTTTACAACGGGTC 1320
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TCTTGCTTATAGTTTTTATTTGAGTTGGAGGTCATCCTTCTCCGAAAATAGAAACACGGT 1380
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      GCCAGCAAGTGATTGTTCAATCAGTTATCTATATCCATTTTTGGGTTGGATTATTTCAAG 1440
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      ACCAACATAATCTTCGTGTAAAGCAGTATTCATAGATGTTTTTTCTCAATCAAAAAAATA 1500
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      TTTTTATTAATATTTTTCTTACTGCACAGTGCTACCCTGGTGAAGATGATACTGCAATAG 1560
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      CACGTGGTGTCCTAATGTATCTATCACAAGGGAATCTTAGGGATGCAAATTTGCTCATGG 1620
consensus_4842#1      ------------------------------------------------------------
                                                                                  

consensus_4842#0      ACGAGCTGAAGGATCAACTAAAATCTGCTGACTTGGAAATCCCCAAAACAGATTTAATTC 1680
consensus_4842#1      -----------------------------------------CGCGGTCCGAGGACACTGC 19
                                                               * *    *      * * *

consensus_4842#0      AGTTCATCAAGTATCTCTTACCGACGCTCGAAAGAGATGCTTACCCTCTTTTCAGGACAC 1740
consensus_4842#1      GG--CAGTAAGTGTCCTGAAAAGAGGC--GTAAGCGAT------CTCTTGTTCAGGACAC 69
                       *  **  **** **    *  ** **  * *** ***      *   * **********

consensus_4842#0      TGCGGCAGAAGTACAAGACAAGTACAGATCACGACCCTGTATTTGAGGAGTTATTAGATG 1800
consensus_4842#1      TGCGGCAGAAGTACAAGACAAGTACAGATCGCGACCCTGTATTTGAGGAGTTATTAGATG 129
                      ****************************** *****************************

consensus_4842#0      AAA-TAGCCGC-AAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGG 1858
consensus_4842#1      ANAATAGCCGCCAAAATTTTATGGAATACGGAGCCAGAGCGCTTTGGAAGGACTTTTTGG 189
                      * * ******* ************************************************

consensus_4842#0      TGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCAC-AAA 1917
consensus_4842#1      TGATATGTTCAGGGTATAATGATGAGAAAAGGATTTCGTCATAAATATTCCAGCACTAAA 249
                      ******************************************************** ***

consensus_4842#0      GCTCCCGACGCGCATTTCGTTCGCTAATACAAATTGCTGCTGGAAGATGAACACCCGGCC 1977
consensus_4842#1      GCTCCCGACGCGCATTTCGTTCGCTAATATAAATTGCTGCTGGAAGATGAACACCCGGCC 309
                      ***************************** ******************************

consensus_4842#0      CGGCCCGAAAAGAGCATAAGAAAAAGTTCTGT-TGCT-GCCTTCCTCAGCCTTGATTATC 2035
consensus_4842#1      CGGCCCGAAAAGAGCATAAGAAAAAGTTCTGTCTGCTCGCCTTCCTCAGCCTTGATTATC 369
                      ******************************** **** **********************

consensus_4842#0      CTGAGGCCATACATTTAGCTCCAAACTGCATATGATGATATATGCTCC-AGTTACCACTG 2094
consensus_4842#1      CTGAGGCCATACATTTAGCTCCAA-CTGCATATGATGATATATGCTCCCAGTTACCACTG 428
                      ************************ *********************** ***********

consensus_4842#0      ATCTCTTGTAAAACCATTCAACTGTTTTGCTCGTATCATGGTCGTGTTCTAATGATATTA 2154
consensus_4842#1      ATCTCTTGTAAAACCATTCAACTGTTTTGCTTGTATCATGGTCGTGTTCTAACGATATTA 488
                      ******************************* ******************** *******

consensus_4842#0      CTATTC-TTTAACATTTT-TTGTAGTTCCAGTTTTGCAGTTTTAA-AACGG--------- 2202
consensus_4842#1      CTATTCCTTTAACATNTTGTTGTAGTTCCAGTTCTTCAGTTTTAACAATGGCACTTTATC 548
                      ****** ******** ** ************** * ********* ** **         

consensus_4842#0      ------------
consensus_4842#1      CTGACTAAAAAA 560


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)