cluster # 4846

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Oryza sativa
cluster # 4846 cluster # 4846 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4846#0 length = 1567 sequences # 3
consensusID : consensus_4846#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1567
fasta sequence
                              [CCCACCCTCTTCGCTCACTGCAGATAGAAGAAAAAGAGATTTGTTTCTGCTTCCGCTGCTGCGAGCGATCCGAGGGGCGGGGAGAAAAAAGAAAAAAAGGAAAACAAGCCGCGCAGCCTCTCCCCGCGCCGACAAATCGCTGTGGGCGGCAACCAACTCTGCGAGCTCCGCGGCGGCGGTTCGGATCGGCGGATCTCGTCGGCCGGCGGTGCGGTCGCCACCACCATGATGAGCAGCAGTAGCTCCCCTCCACCGCCCTCAATTCCCACGGGGGGTGGAGGCTTCTTCAGAGGTTACACCAAGCTTTGCAAGGGCCTCGCTGTCATATTGCTTCTCGTGCACCTTTTGATCCAGCTTTTTCCATCAGCTGTCACCTATCTTGCTCTTGTTCCTGGAAGGACAATCCCTTTTGCCTGGGACCTGATAACTGGTGGCTATGTTGAGCTAACAATTCCAGGGGTTATTATCAGCATAGTTGGTCTTCTTTTATTTGGGAAATTATTAGAACCTTTATGGGGCTCAAAGGAGTTATCGAAGTTCATTTTTGTTGTCAACTTTTCAACATCTTTGTGTGTCTTCATAACTGCTATTGCTCTATACTACACAACACAAGAAGAGAGCTACCTCTATGCTCCTCTTTCTGGATTTTATGGAGTTCTGACTGGACTGCTGGTGGGTATCAAGCAGCTTATGTCAGAACAGGAGCTAAATCTTTTTGTGCTGAAGATTAAGGCAAAGTGGATTCCATCACTTGTTGCATTGATCTCAGTTATTGTAAGCTTCTTCGTAAAGGAGCTGGTCTCTTACCTCCCAGTTATATTGTTTGGCATTTATATGAGTTGGATTTACCTGCGGTACTT-CCAAAGGAGATTAGAGACAGGCTTGAAAGGAGACCCAAGCGAAGAGTTCTCTTTCTCAAGTTTCTTCCCTGAATTTCTAAGACCTGTGCTGGATCCGATAGCTTCAATATTCCACAGGCTTCTTTGTGGAAGATCTGAAAGGGCTGATGCTAGAGGTCAGACA-TTGGATACCACACCTTTGCCTGGTTCAGATTCTATTGAGGCGAACAGAAGAAGAGAAAGGGGTCAAAGGGCACTGGAGCAAAGATTAGCTGAGAAGCTGGCTGCGGTCAAAAGTTCTGAGGGCACATCACAGGATGCCTCTGACAAAGTTTGAGCCTTCCATGCAACGACATGTGCATTTTGTGAATTCCCGGTAGTGTTGTCAATGTCACATTCTCTGAGGACACAGAAGTTACAAGACACCATCGAATTACCCCTCGCGGCCT-TTTACTGTTTTTTTCA-TTGGTTCTCTTGCTTATCATCTGTAATCAGTTTGTAGTGCATGGCAACGGTGGTCCGAGAATGTGACATTTACTGATTTTAGGAAGTAAACCCTGCTTAACAACGTGTGATGTTTTTTTTCTTAGGACAAGCTAGTTGCATGCATTACCACAGTTTGTGGTGGTGCCCTTTTGCCCCTGGTAAAAAAAGCTTTTCTTTCCCTGCATGTTTTAAAGACCACTGGACGCTTTGCGTGAACAAAGTGATGTCAAATTGTCAGGAGT]

[+] EMBL AK102349             [CCCACCCTCTTCGCTCACTGCAGATAGAAGAAAAAGAGATTTGTTTCTGCTTCCGCTGCTGCGAGCGATCCGAGGGGCGGGGAGAAAAAAGAAAAAAAGGAAAACAAGCCGCGCAGCCTCTCCCCGCGCCGACAAATCGCTGTGGGCGGCAACCAACTCTGCGAGCTCCGCGGCGGCGGTTCGGATCGGCGGATCTCGTCGGCCGGCGGTGCGGTCGCCACCACCATGATGAGCAGCAGTAGCTCCCCTCCACCGCCCTCAATTCCCACGGGGGGTGGAGGCTTCTTCAGAGGTTACACCAAGCTTTGCAAGGGCCTCGCTGTCATATTGCTTCTCGTGCACCTTTTGATCCAGCTTTTTCCATCAGCTGTCACCTATCTTGCTCTTGTTCCTGGAAGGACAATCCCTTTTGCCTGGGACCTGATAACTGGTGGCTATGTTGAGCTAACAATTCCAGGGGTTATTATCAGCATAGTTGGTCTTCTTTTATTTGGGAAATTATTAGAACCTTTATGGGGCTCAAAGGAGTTATCGAAGTTCATTTTTGTTGTCAACTTTTCAACATCTTTGTGTGTCTTCATAACTGCTATTGCTCTATACTACACAACACAAGAAGAGAGCTACCTCTATGCTCCTCTTTCTGGATTTTATGGAGTTCTGACTGGACTGCTGGTGGGTATCAAGCAGCTTATGTCAGAACAGGAGCTAAATCTTTTTGTGCTGAAGATTAAGGCAAAGTGGATTCCATCACTTGTTGCATTGATCTCAGTTATTGTAAGCTTCTTCGTAAAGGAGCTGGTCTCTTACCTCCCAGTTATATTGTTTGGCATTTATATGAGTTGGATTTACCTGCGGTACTT CCAAAGGAGATTAGAGACAGGCTTGAAAGGAGACCCAAGCGAAGAGTTCTCTTTCTCAAGTTTCTTCCCTGAATTTCTAAGACCTGTGCTGGATCCGATAGCTTCAATATTCCACAGGCTTCTTTGTGGAAGATCTGAAAGGGCTGATGCTAGAGGTCAGACA TTGGATACCACACCTTTGCCTGGTTCAGATTCTATTGAGGCGAACAGAAGAAGAGAAAGGGGTCAAAGGGCACTGGAGCAAAGATTAGCTGAGAAGCTGGCTGCGGTCAAAAGTTCTGAGGGCACATCACAGGATGCCTCTGACAAAGTTTGAGCCTTCCATGCAACGACATGTGCATTTTGTGAATTCCCGGTAGTGTTGTCAATGTCACATTCTCTGAGGACACAGAAGTTACAAGACACCATCGAATTACCCCTCGCGGCCT TTTACTGTTTTTTTCA TTGGTTCTCTTGCTTATCATCTGTAATCAGTTTGTAGTGCATGGCAACGGTGGTCCGAGAATGTGACATTTACTGATTTTAGGAAGTAAACCCTGCTTAACAACGTGTGATGTTTTTTTTCTTAGGACAAGCTAGTTGCATGCATTACCACAGTTTGTGGTGGTGCCCTTTTGCCCCTGGTAAAAAAAGCTTTTCTTTCCCTGCATGTTTTAAAGACCACTGGACGCTTTGCGTGAACAAAGTGATGTCAAATTGTCAGGAGT]
[+] EMBL OSS3642A             [                                   nAGATTTGTTTCTGCTTCCGCTGCTGCNAGCNATCCGAGGGGCGGGGAGAAAAAAGAAAAAAAGGAAAACAAGCCGCGCA NCTCTCCCCGCGCCGACAAATCGCTGTGGGCGGCAACCAACTCTGCGAGCTCCGCGGCGGCGGTTCGGATCGGCGGATCTCGTCGGCCGGCGGTGCGGTCGCCACCACCATGATGAGCAGCAGTAGCTCCGCTCCACCGCCCTCAATTCCCACGGGGGGTGGAGGCTTCTTCAGAGGTTACACCAAGCTTTGCAAGGGCCTCGCTGTCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI801688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGTACTTCCCAAAGGAGA TAGAGACAGGCTTGAAAGGAGACCCAAGCGAGGAGTTCTCTTTCTCAAGTTTCTTCCCTGAATTTCTAAGACCTGTGCTGGATCCGATAGCTTCGATATTCCACAGGCTTCTTTGTGGAAGATCTGAAAGGGCTGATGCTAGAGGTCAGACACTTGGATACCACACCTTTGCCTGGTTCAGATTCTATTGAGGCGAACAGAAGAAGAGAAAGGGGTCAAAGGGCACTGGAGCCAAGATTAGCTGAGAAGCTGGCT CGGTCAAAAGTTCTGAGGGCACATCACAGGATGCCTCTGATAAAGTTTGAGCCTTCCATGCAACGACATGTGCATTTTGTGAATTCCCGGTAGTGTTGTCAATGTCACATTCTCTGAGG  ACAGAAGTTACAAGACACCATCGAATTACCCCTCGCGGCCTGTTTGCTCGTTTTTTCATTTGGTTCCCCTGCTTATCATCTGTAATCAGTTTACAGTGCATAGCAACGGTGGTCCGAGAATGTGACATTTACTGATTTTAGGAAGTAAACCCTGCTTAACAcaaa                                                                                                                                                             ]




>consensus_4846#0
CCCACCCTCTTCGCTCACTGCAGATAGAAGAAAAAGAGATTTGTTTCTGCTTCCGCTGCT
GCGAGCGATCCGAGGGGCGGGGAGAAAAAAGAAAAAAAGGAAAACAAGCCGCGCAGCCTC
TCCCCGCGCCGACAAATCGCTGTGGGCGGCAACCAACTCTGCGAGCTCCGCGGCGGCGGT
TCGGATCGGCGGATCTCGTCGGCCGGCGGTGCGGTCGCCACCACCATGATGAGCAGCAGT
AGCTCCCCTCCACCGCCCTCAATTCCCACGGGGGGTGGAGGCTTCTTCAGAGGTTACACC
AAGCTTTGCAAGGGCCTCGCTGTCATATTGCTTCTCGTGCACCTTTTGATCCAGCTTTTT
CCATCAGCTGTCACCTATCTTGCTCTTGTTCCTGGAAGGACAATCCCTTTTGCCTGGGAC
CTGATAACTGGTGGCTATGTTGAGCTAACAATTCCAGGGGTTATTATCAGCATAGTTGGT
CTTCTTTTATTTGGGAAATTATTAGAACCTTTATGGGGCTCAAAGGAGTTATCGAAGTTC
ATTTTTGTTGTCAACTTTTCAACATCTTTGTGTGTCTTCATAACTGCTATTGCTCTATAC
TACACAACACAAGAAGAGAGCTACCTCTATGCTCCTCTTTCTGGATTTTATGGAGTTCTG
ACTGGACTGCTGGTGGGTATCAAGCAGCTTATGTCAGAACAGGAGCTAAATCTTTTTGTG
CTGAAGATTAAGGCAAAGTGGATTCCATCACTTGTTGCATTGATCTCAGTTATTGTAAGC
TTCTTCGTAAAGGAGCTGGTCTCTTACCTCCCAGTTATATTGTTTGGCATTTATATGAGT
TGGATTTACCTGCGGTACTTCCAAAGGAGATTAGAGACAGGCTTGAAAGGAGACCCAAGC
GAAGAGTTCTCTTTCTCAAGTTTCTTCCCTGAATTTCTAAGACCTGTGCTGGATCCGATA
GCTTCAATATTCCACAGGCTTCTTTGTGGAAGATCTGAAAGGGCTGATGCTAGAGGTCAG
ACATTGGATACCACACCTTTGCCTGGTTCAGATTCTATTGAGGCGAACAGAAGAAGAGAA
AGGGGTCAAAGGGCACTGGAGCAAAGATTAGCTGAGAAGCTGGCTGCGGTCAAAAGTTCT
GAGGGCACATCACAGGATGCCTCTGACAAAGTTTGAGCCTTCCATGCAACGACATGTGCA
TTTTGTGAATTCCCGGTAGTGTTGTCAATGTCACATTCTCTGAGGACACAGAAGTTACAA
GACACCATCGAATTACCCCTCGCGGCCTTTTACTGTTTTTTTCATTGGTTCTCTTGCTTA
TCATCTGTAATCAGTTTGTAGTGCATGGCAACGGTGGTCCGAGAATGTGACATTTACTGA
TTTTAGGAAGTAAACCCTGCTTAACAACGTGTGATGTTTTTTTTCTTAGGACAAGCTAGT
TGCATGCATTACCACAGTTTGTGGTGGTGCCCTTTTGCCCCTGGTAAAAAAAGCTTTTCT
TTCCCTGCATGTTTTAAAGACCACTGGACGCTTTGCGTGAACAAAGTGATGTCAAATTGT
CAGGAGT
clustalw multiple alignements is not computed in this case