cluster # 487

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Oryza sativa
cluster # 487 cluster # 487 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_487#0 length = 920 sequences # 2

consensusID : consensus_487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 920
fasta sequence

                              [CGCCGCTTGCAAGGTCGCCGCCGACGACGCGCGGAGAGGAGAGGAGAGGAGAGAGGAAGAGAAAATCTTCCGATTCCGGCGAGGAGGGGATGGGGTCGGCGCTGCTGCCGACGCTGCGGCGGAAGCCGGAGGTGGACGCCGCCATCCGCGACACGCTCGACAAGGTCCTCGTCCTCCGCTTCGGCCGCGCCGACGACGCCGCCTGCCTCCACCTCGACGACATCCTCGCTAAATCTTCTTGGGACATATCAAGGTTTGCGACGGTAGCATTGGTCGATATGGATTCTGAGGAGATGCAAGTCTACATTGACTATTTCGATATCACTTTGGTTCCAGCTACCATTTTTTTCTTCAATGCCCAACACATGAAGATGGACTCAGGGACACCTGATCACACAAAATGGATTGGCTCTTTCAGCAGCAAGCAAGATTTCATTGATGTAGTTGAGGCAATATTTAGGGGTGCGATGAAAGGTAAACTGATTGTTTCTTGCCCACTTCCACCAGAGAGGATACCCAAATTCCAGCTCCTTTTCAAGGATGTTTGAGCAAGGAAAGTGCTCATCACATGCGCATGCTAAAAGAGTGTCTTGGTCATGATGACAGAACTATATGAAGCTATGTTCAGGCAGAAGAGTTTGTGAAGATCTCGTCTCTCCAATTGGTTTGTCTCGACTACTTTCATTTATGTAGTAGTATATCACATGCTGTGTTGATATGTACCAGGCATGGTAGCTTTTGTTCTGTACTTCTATAGGAGGCAAACTGAATCGATCAAGAAAAGTGCATATCTGACATGGTGCCGCATAGTAAGCTTTTAGTAATTAACACAAGTTAGAATGACACTTTGCATGTAGTTTGCATTGCACTCTAAATACAGAGAAGGGTATAAAATATTATTGCTCGNTAATTGTGAGGTG]

[+] EMBL AK067692             [CGCCGCTTGCAAGGTCGCCGCCGACGACGCGCGGAGAGGAGAGGAGAGGAGAGAGGAAGAGAAAATCTTCCGATTCCGGCGAGGAGGGGATGGGGTCGGCGCTGCTGCCGACGCTGCGGCGGAAGCCGGAGGTGGACGCCGCCATCCGCGACACGCTCGACAAGGTCCTCGTCCTCCGCTTCGGCCGCGCCGACGACGCCGCCTGCCTCCACCTCGACGACATCCTCGCTAAATCTTCTTGGGACATATCAAGGTTTGCGACGGTAGCATTGGTCGATATGGATTCTGAGGAGATGCAAGTCTACATTGACTATTTCGATATCACTTTGGTTCCAGCTACCATTTTTTTCTTCAATGCCCAACACATGAAGATGGACTCAGGGACACCTGATCACACAAAATGGATTGGCTCTTTCAGCAGCAAGCAAGATTTCATTGATGTAGTTGAGGCAATATTTAGGGGTGCGATGAAAGGTAAACTGATTGTTTCTTGCCCACTTCCACCAGAGAGGATACCCAAATTCCAGCTCCTTTTCAAGGATGTTTGAGCAAGGAAAGTGCTCATCACATGCGCATGCTAAAAGAGTGTCTTGGTCATGATGACAGAACTATATGAAGCTATGTTCAGGCAGAAGAGTTTGTGAAGATCTCGTCTCTCCAATTGGTTTGTCTCGACTACTTTCATTTATGTAGTAGTATATCACATGCTGTGTTGATATGTACCAGGCATGGTAGCTTTTGTTCTGTACTTCTATAGGAGGCAAACTGAATCGATCAAGAAAAGTGCATATCTGACATGGTGCCGCATAGTAAGCTTTTAGTAATTAACACAAGTTAGAATGACACTTTGCATGTAGTTTGCATTGCACTCTAAATACAGAGAAGGGTATAAAATATT                      ]
[+] EMBL CA764134             [                                                                                                                                                                                                                                                          AAGGTTTGCGACGGTAGCATTGGTCGATATGGATTCTGAGGAGATGCAAGTCTACATTGACTATTTCGATATCACTTTGGTTCCAGCTACCATTTTTTTCTTCAATGCCCAACACATGAAGATGGACTCAGGGACACCTGATCACACAAAATGGATTGGCTCTTTCAGCAGCAAGCAAGATTTCATTGATGTAGTTGAGGCAATATTTAGGGGTGCGATGAAAGGTAAACTGATTGTTTCTTGCCCACTTCCACCAGAGAGGATACCCAAATTCCAGCTCCTTTTCAAAGATGTTTGAGCAAGGAAAGTGCTCATCACATGCGCATGCTAAAAGAGTGTCTTGGTCATGATGACAGAACTATATGAAGCTATGTTCAGGCAGAAGAGTTTGTGAAGATCTCGTCTCTCCAATTGGTTTGTCTCGACTACTTTCATTTATGTAGTAGTATATCACATGCTGTGTTGATATGTACCAGGCATGGTAGCTTTTGTTCTGTACTTCTATAGGAGGCAAACTGAATCGATCAAGAAAAGTGCATATCTGACATGGTGCCGCATAGTAAGCTTTTAGTAATTAACACAAGTTAGAATGACACTTTGCATGTAGTTTGCATTGCACTCTAAATACAGAGAAGGGTATAAAATATTATTGCTCGNTAATTGTGAGGTG]




>consensus_487#0
CGCCGCTTGCAAGGTCGCCGCCGACGACGCGCGGAGAGGAGAGGAGAGGAGAGAGGAAGA
GAAAATCTTCCGATTCCGGCGAGGAGGGGATGGGGTCGGCGCTGCTGCCGACGCTGCGGC
GGAAGCCGGAGGTGGACGCCGCCATCCGCGACACGCTCGACAAGGTCCTCGTCCTCCGCT
TCGGCCGCGCCGACGACGCCGCCTGCCTCCACCTCGACGACATCCTCGCTAAATCTTCTT
GGGACATATCAAGGTTTGCGACGGTAGCATTGGTCGATATGGATTCTGAGGAGATGCAAG
TCTACATTGACTATTTCGATATCACTTTGGTTCCAGCTACCATTTTTTTCTTCAATGCCC
AACACATGAAGATGGACTCAGGGACACCTGATCACACAAAATGGATTGGCTCTTTCAGCA
GCAAGCAAGATTTCATTGATGTAGTTGAGGCAATATTTAGGGGTGCGATGAAAGGTAAAC
TGATTGTTTCTTGCCCACTTCCACCAGAGAGGATACCCAAATTCCAGCTCCTTTTCAAGG
ATGTTTGAGCAAGGAAAGTGCTCATCACATGCGCATGCTAAAAGAGTGTCTTGGTCATGA
TGACAGAACTATATGAAGCTATGTTCAGGCAGAAGAGTTTGTGAAGATCTCGTCTCTCCA
ATTGGTTTGTCTCGACTACTTTCATTTATGTAGTAGTATATCACATGCTGTGTTGATATG
TACCAGGCATGGTAGCTTTTGTTCTGTACTTCTATAGGAGGCAAACTGAATCGATCAAGA
AAAGTGCATATCTGACATGGTGCCGCATAGTAAGCTTTTAGTAATTAACACAAGTTAGAA
TGACACTTTGCATGTAGTTTGCATTGCACTCTAAATACAGAGAAGGGTATAAAATATTAT
TGCTCGNTAATTGTGAGGTG

clustalw multiple alignements is not computed in this case