cluster # 4881

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Oryza sativa
cluster # 4881 cluster # 4881 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4881#0 length = 771 sequences # 3

consensusID : consensus_4881#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 771
fasta sequence

                              [TTTTTTTTTTTTTAGCACATGAAAGCCACCACACAGGTTCACTCATAGATCACAATATGTTCATATACATCAGTACATTGACCATAGCAAAATAAATAAGTTTAGTACATACATCTTCACCAAATCCAGCCACAAAAGCAAACTAGGTTAAGTTTATTTTTTTCTACCAAACACTAGATAGAAACATGAGGCCGTACATTATTGACCAAATCCATATAGTCCAACCACAATTAACTGAACAAAATAGGTAACATGTCCAAAACTCCAAATAGTTCAAAATTCACTGAAGTCACATGTCCAAAGCATACCAGCCTGCGGAATAGGGACCAGCCTACTCCAGCCAATGCAGCCGGGCGCTGATCGGTAAAGGCCACAAGTAGCCACCACCGTCAACGCACGGAGCAGGATGGGGAGCCCGCAGCAGTGGCCAGCGCTGCCGCCGACGCCACCACAAGGAGACATCA-CCACCCTTCGGTTCTTCAACAAATCTTCTGATCTCACAGCTCCACCGCCACCTGCTATCACCGCCGCCATCCACTCCTGCATCCATGGCTCCTCACCAGCAAAACACTCATACGAGACAGACCCGAACCACAGGAAAGACCTGACAACCAAACTACGAGCCTAGCTACACTATACTAGTAGGGTAGATGGCCGGACCCCTCCTCCAACACTCACCGATGGTGAACCGCCGGAATCAGGGGAAGAGGGGCCAGGAAACAGGAGAGAAAGGAAACTACTGTAGCAAGGGGAGGGGAAAGAAGACTCGGC]

[+] EMBL CF281762             [TTTTTTTTTTTTTAGCACATGAAAGCCACCACACAGGTTCACTCATAGATCACAATATGTTCATATACATCAGTACATTGACCATAGCAAAATAAATAAGTTTAGTACATACATCTTCACCAAATCCAGCCACAAAAGCAAACTAGGTTAAGTTTATTTTTTTCTACCAAACACTAGATAGAAACATGAGGCCGTACATTATTGACCAAATCCATATAGTCCAACCACAATTAACTGAACAAAATAGGTAACATGTCCAAAACTCCAAATAGTTCAAAATTCACTGAAGTCACATGTCCAAAGCATACCAGCCTGCGGAATAGGGACCAGCCTACTCCAGCCAATGCAGCCGGGCGCTGATCGGTAAAGGCCACAAGTAGCCACCACCGTCAACGCACGGAGCAGGATGGGGAGCCCGCAGCAGTGGCCAGCGCTGCCGCCGACGCCACCACAAGGAGACATCA CCACCCTTCGGTTCTTCAACAAATCTTCTGATCTCACAGCTCCACCGCCACCTGCTATCACCGCCGCCATCCACTCCTGCATCCATGGCTCCTCACCAGCAAAACACTCATACGAGACAGACCCGAACCACAGGAAAGACCTGACAACCAAACTACGAGCCTAGCT                                                                                                                                             ]
[-] EMBL CF282278             [                                                                                                                                                                                                                                                AAAATAGGTAACATGTCCAAAACTCCAAATAGTTCAAAATTCACTGAAGTCACATGTCCAAAGCATACCAGCCTGCGGAATAGGGACCAGCCTACTCCAGCCAATGCAGCCGGGCGCTGATCGGTAAAGGCCACAAGTAGCCACCACCGTCAACGCACGGAGCAGGATGGGGAGCCCGCAGCAGTGGCCAGCGCTGCCGCCGACGCCACCACAAGGAGACATCACCCACCCTTCGGTTCTTCAACAAATCTTCTGATCTCACAGCTCCACCGCCACCTGCTATCACCGCCGCCATCCACTCCTGCATCCATGGCTCCTCACCAGCAAAACACTCATACGAGACAGACCCGAACCACAGGAAAGACCTGACAACCAAACTACGAGCCTAGCTACACTATACTAGTAGGGTAGATGGCCGGACCCCTCCTCCAACACTCACCGATGGTGAACCGCCGGAATCAGGGGAAGAGGGGCCAGGAAACAGGAGAGAAAGGAAACTACTGTAGCAAGGGGAGGGGAAAGAAGACTCGGC]
[-] EMBL CF281761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAGCCTAGCTACACTATACTAGTAGGGTAGATGGCCGGACCCCTCCTCCAACACTCACCGATGGTGAACCGCCGGAATCAGGGGAAGAGGGGCCAGGAAACAGGAGAGAAAGGAAACTACTGTAGCAAGGGGAGGGGAAAGAAG       ]




>consensus_4881#0
TTTTTTTTTTTTTAGCACATGAAAGCCACCACACAGGTTCACTCATAGATCACAATATGT
TCATATACATCAGTACATTGACCATAGCAAAATAAATAAGTTTAGTACATACATCTTCAC
CAAATCCAGCCACAAAAGCAAACTAGGTTAAGTTTATTTTTTTCTACCAAACACTAGATA
GAAACATGAGGCCGTACATTATTGACCAAATCCATATAGTCCAACCACAATTAACTGAAC
AAAATAGGTAACATGTCCAAAACTCCAAATAGTTCAAAATTCACTGAAGTCACATGTCCA
AAGCATACCAGCCTGCGGAATAGGGACCAGCCTACTCCAGCCAATGCAGCCGGGCGCTGA
TCGGTAAAGGCCACAAGTAGCCACCACCGTCAACGCACGGAGCAGGATGGGGAGCCCGCA
GCAGTGGCCAGCGCTGCCGCCGACGCCACCACAAGGAGACATCACCACCCTTCGGTTCTT
CAACAAATCTTCTGATCTCACAGCTCCACCGCCACCTGCTATCACCGCCGCCATCCACTC
CTGCATCCATGGCTCCTCACCAGCAAAACACTCATACGAGACAGACCCGAACCACAGGAA
AGACCTGACAACCAAACTACGAGCCTAGCTACACTATACTAGTAGGGTAGATGGCCGGAC
CCCTCCTCCAACACTCACCGATGGTGAACCGCCGGAATCAGGGGAAGAGGGGCCAGGAAA
CAGGAGAGAAAGGAAACTACTGTAGCAAGGGGAGGGGAAAGAAGACTCGGC

clustalw multiple alignements is not computed in this case