cluster # 4888

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Oryza sativa
cluster # 4888 cluster # 4888 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4888#0 length = 652 sequences # 3

consensusID : consensus_4888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 652
fasta sequence

                              [TTTTTTTTTTTTGAAGACACCAAATAATGTCTACTATAATATTACTCAGCTCATGACTTCCCACAAAAGAATGGAATTTCAGTACAACCAATAATCCAAGCCACTGGTACACAATGGCACCAATCCGTACACAAATTCTCCTATACAAATCAAAACAACAGCACATACACAGATACACTCAAACACGCCACAAAAATTATAGCAAAATAACACAAACTAATTTAATCGATGGGTCAATCATCCAACAGCCAAATGAATAATCTGATGATGAGAAGTTGAGGCTTTCAGAACAGCATGGCAGCTAGCAGCAGCAGAAACGCAGGAAAACCGGCATGGGTGGCGACCCTCCGTGCAGAGCTGGGCACCACCTGCGGCCTCGTCTGCGTCTGGCTCGTCGCCGGCGGCGTGGCCGTCGCCGTCGGCGATCCGGCACCGGCCGTCGACTCCGGCGGACTTGGCGGCAGTGGTGGCATGGCCGGAGAAACTGCAACGGGTACTCCTGCAGCTGGAATCTGAGCTGA-TGTATCTT-CGCATTGGAGGGGA-ACAGACATGGAGTAGCAGGCTTTAGGCAATGTAACGGCT-AGCGTCCGGTTGATGGGGGATGCCGAGGGGCACGTTGCGGTGAGGACGAGGCAGGCGCAGTGGGCTCGTG]

[-] EMBL AU085735             [TTTTTTTTTTTTGAAGACACCAAATAATGTCTACTATAATATTACTCAGCTCATGACTTCCCACAAAAGAATGGAATTTCAGTACAACCAATAATCCAAGCCACTGGTACACAATGGCACCAATCCGTACACAAATTCTCCTATACAAATCAAAACAACAGCACATACACAGATACACTCAAACACGCCACAAAAATTATAGCAAAATAACACAAACTAATTTAATCGATTGGTCAATCAACCANCAGCCANATGAATAATCNGATGATGAGAAGTTGAGGCTTTCAGAACAGCATGGCAGCTAGC                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB965319             [                                    TAATATTACTCAGCTCATGACTTCCCACAAAAGAATGGAATTTCAGTACAACCAATAATCCAAGCCACGGGTACACAAGGGCACCAATCCGTACACAAATTCTCCTATACAAATCAAAACAACAGCACATACACAGATACACTCAAACACGCCACAAAAATTATAGCAAAATAACACAAACTAATTTAATCGATGGGTCAATCATCCAACAGCCAAATGAATAATCTGATGATGAGAAGTTGAGGCTTTCAGAACAGCATGGCAGCTAGCAGCAGCAGAAACGCAGGAAAACCGGCATGGGTGGCGACCCTCCGTGCAGAGCTGGGCACCACCTGCGGCCTCGTCTGCGTCTGGCTCGTCGCCGGCGGCGTGGCCGTCGCCGTCGGCGATCCGGCACCGGCCGTCGACTCCGGCGGACTTGGCGGCAGTGGTGGCATGGCCGGAGAAACTGCAACGGGTACTCCTGCAGCTGGAATCTGAGCTGA TGTATCTT CGCATTGGAGGGGA ACAGACATGGAGTAGCAGGCTTTAGGCAATGTAACGGCT AGCGTCCGGTT                                                           ]
[+] EMBL BU673115             [                                                                                                                            CCGGACACAAATTCTCCTATACAAATCAAAACAACAGCACATACACAGATACACTCAAACACGCCACAAAAATTATAGCAAAATAACACAAACTAATTTAATCGATGGGTCAATCATCCAACAGCCAAATGAATAATCTGATGATGAGAAGTCGAGGCTTTCAGAACAGCATGGCAGCTAGCAGCAGCAGAAACGCAGGAAAACCGGCATTGGTGGCGACCCTCCGTGCAGAGCTGGGCACCACCTGCGGCCTCGTCTGCGTCTGGCTCGTCGCCGGCGGCGTGGCCGTCGCCGTCGGCGATCCGGCACCGGCCGTCGACTCCGGGGGACTTGGCGGCAGTGGTGGCATGGCCGGAGAAACTGCAACGGGTACTCCTGGAGGTGGAATCTGAGCTGATTGTATCTTGTGC TGGGAGGGGACACAGACATGGAGTTGCAGGCTTTAGGCAATGTAACGGTTAAGCGTCCGGTTGATGGGGGATGCCGAGGGGCACGTTGCGGTGAGGACGAGGCAGGCGCAGTGGGCTCGTG]




>consensus_4888#0
TTTTTTTTTTTTGAAGACACCAAATAATGTCTACTATAATATTACTCAGCTCATGACTTC
CCACAAAAGAATGGAATTTCAGTACAACCAATAATCCAAGCCACTGGTACACAATGGCAC
CAATCCGTACACAAATTCTCCTATACAAATCAAAACAACAGCACATACACAGATACACTC
AAACACGCCACAAAAATTATAGCAAAATAACACAAACTAATTTAATCGATGGGTCAATCA
TCCAACAGCCAAATGAATAATCTGATGATGAGAAGTTGAGGCTTTCAGAACAGCATGGCA
GCTAGCAGCAGCAGAAACGCAGGAAAACCGGCATGGGTGGCGACCCTCCGTGCAGAGCTG
GGCACCACCTGCGGCCTCGTCTGCGTCTGGCTCGTCGCCGGCGGCGTGGCCGTCGCCGTC
GGCGATCCGGCACCGGCCGTCGACTCCGGCGGACTTGGCGGCAGTGGTGGCATGGCCGGA
GAAACTGCAACGGGTACTCCTGCAGCTGGAATCTGAGCTGATGTATCTTCGCATTGGAGG
GGAACAGACATGGAGTAGCAGGCTTTAGGCAATGTAACGGCTAGCGTCCGGTTGATGGGG
GATGCCGAGGGGCACGTTGCGGTGAGGACGAGGCAGGCGCAGTGGGCTCGTG

clustalw multiple alignements is not computed in this case