Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4913 cluster # 4913       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4913#0 length = 2417 sequences # 1  
 consensus_4913#1 length = 2109 sequences # 2  
consensusID : consensus_4913#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2417
fasta sequence 
                              [CCAACGCCAAGAGATCGTGTCCGAATTGGGTTTGATCTGGACGGCTGGTTTGTTGCTGCATACTCTTCTGAAAAATTCAACAAGCAGATGAGGTGCTGGCTTTGTTCCTGATGCTAGTGTTCCTTCCTTTTTGTCACTTGTCAGTTGTAACTTTCACTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGATCGACAACGTCAGTTCTTGTGGATAGTTCTTGTGTGTGTTGGTCGCATTGCATGCATTTAACAACGAGCTTAGATGATACCTATGTTCAGCTGATGCCTAATGCCAGCAGCCACAGCCATGTCGATACATCGTACATGGAGCTAATCGATGACTCCAATGTAAGCATGGAAAACACCTAAGTAATACATCATATGCCACTCCAGTGATGAGAGGAGTTCGTCTTGCGGCGCTGCGTTGCTGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGAAGCCGCCGCGGCGGCCGACGATGTGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTCCAGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTGCCTTGATGATGCAGGGGAGCGGCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGGACGAGCTGGAGGCCGAGGTGGGCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGGAGGACGACGACGATGGCGTCGGCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGAGGACGAGGCATTCCACGGGGAGACGAACGCGCCGCGCGTCCCCGCGGAGAAGAAGTGCGGGAAGGCGGCGCGGCGGAGGAGGAGGCAGGCCAAAGGGGAGGTGGTGGACCTGCGCGAGCTGCTCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCCGGAGCGCCGGCGAACTCCTGGAGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCACCGAGCGGCTGGCGCATTACTTCGCCGATGGCCTGGAGGCGCGTCTGGCCGGCGCGGCGAGCCTGGAGCGCCGGCTGGTCGCGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGGAGGCGTACCAGGTGTTCATGGCGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCAACATGGCCATCCTCCGCGCGGCGGAAGGGAGGAACAGGCTGCACATCGTGGACTACGGTGGTCAGTACCACGGCCTCCAGTGGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCGGGCCGCCGGAGGTGAGGATGACGCTCGTAGGCCATCCCCAGCCAGGGTTCCGGCCAGCCCGACGGCTCGAGAGGACGGGGCGCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCCCGTTCAAGTTCCGCGCCGTGGCGGCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCGGCGTCGACCCCGACGACGAGGCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGATGGACGAGAGCGGCGTGTTCGACGACCCGAGCCCGCGGGACACGGTCCTGGGCAGCATCCGCGACATGCGCCCGGCGGTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCTTCTTCCCGACGAGGTTCCGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGGGCGCGACGACGCCGGAGGAGGGGAGCCACCTGCGGGTGGTGCTGGAGAGGGACGTGCTGAGGCGGGCGGCGGTGGGGGTGATCGCGGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGACGTACAGGCGGTGGCAGGCGAGGAATCGGCGGGCGGGGCTGAGGCAGGCGGCGGTGGAGGGCGACGTGGTGGAGGCGGTGAGGAGAAGGGTGAGGAGGAGGCATCACGAGGAGTTCGTGATCGAGGAGGATGCAGGGTGGTTGCTGCAGGGGTGGAAGGGGCGCATCCTGTACGCTCACTCGGCGTGGGTCGTGGCAGAGGATGGTGCGCACTAGGCAGCAGGCGCCGGTGGTGGTGTTCGTGTGTGTTCTGGGATGGGAATGCGTGTTTGCTTCTGTAACGTTGATCAGTGAAGCTATGGAGCGTTTCTTCCCTGGAGCAACTAGCGTTGGAGACTTGGAGAGCTCACAACTCACAAGAGTAAACAAGTTTAGTGGCAATGATCCTTTCAGCTCGGGACGAGCGTTCATTGTCCACTAATGTCATACCGGGATGTATCATGTATGAAGGCTAGCTCAGAAACATAGATAGCTTATTAATTCA]

[+] EMBL AK073051             [CCAACGCCAAGAGATCGTGTCCGAATTGGGTTTGATCTGGACGGCTGGTTTGTTGCTGCATACTCTTCTGAAAAATTCAACAAGCAGATGAGGTGCTGGCTTTGTTCCTGATGCTAGTGTTCCTTCCTTTTTGTCACTTGTCAGTTGTAACTTTCACTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGATCGACAACGTCAGTTCTTGTGGATAGTTCTTGTGTGTGTTGGTCGCATTGCATGCATTTAACAACGAGCTTAGATGATACCTATGTTCAGCTGATGCCTAATGCCAGCAGCCACAGCCATGTCGATACATCGTACATGGAGCTAATCGATGACTCCAATGTAAGCATGGAAAACACCTAAGTAATACATCATATGCCACTCCAGTGATGAGAGGAGTTCGTCTTGCGGCGCTGCGTTGCTGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGAAGCCGCCGCGGCGGCCGACGATGTGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTCCAGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTGCCTTGATGATGCAGGGGAGCGGCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGGACGAGCTGGAGGCCGAGGTGGGCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGGAGGACGACGACGATGGCGTCGGCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGAGGACGAGGCATTCCACGGGGAGACGAACGCGCCGCGCGTCCCCGCGGAGAAGAAGTGCGGGAAGGCGGCGCGGCGGAGGAGGAGGCAGGCCAAAGGGGAGGTGGTGGACCTGCGCGAGCTGCTCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCCGGAGCGCCGGCGAACTCCTGGAGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCACCGAGCGGCTGGCGCATTACTTCGCCGATGGCCTGGAGGCGCGTCTGGCCGGCGCGGCGAGCCTGGAGCGCCGGCTGGTCGCGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGGAGGCGTACCAGGTGTTCATGGCGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCAACATGGCCATCCTCCGCGCGGCGGAAGGGAGGAACAGGCTGCACATCGTGGACTACGGTGGTCAGTACCACGGCCTCCAGTGGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCGGGCCGCCGGAGGTGAGGATGACGCTCGTAGGCCATCCCCAGCCAGGGTTCCGGCCAGCCCGACGGCTCGAGAGGACGGGGCGCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCCCGTTCAAGTTCCGCGCCGTGGCGGCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCGGCGTCGACCCCGACGACGAGGCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGATGGACGAGAGCGGCGTGTTCGACGACCCGAGCCCGCGGGACACGGTCCTGGGCAGCATCCGCGACATGCGCCCGGCGGTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCTTCTTCCCGACGAGGTTCCGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGGGCGCGACGACGCCGGAGGAGGGGAGCCACCTGCGGGTGGTGCTGGAGAGGGACGTGCTGAGGCGGGCGGCGGTGGGGGTGATCGCGGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGACGTACAGGCGGTGGCAGGCGAGGAATCGGCGGGCGGGGCTGAGGCAGGCGGCGGTGGAGGGCGACGTGGTGGAGGCGGTGAGGAGAAGGGTGAGGAGGAGGCATCACGAGGAGTTCGTGATCGAGGAGGATGCAGGGTGGTTGCTGCAGGGGTGGAAGGGGCGCATCCTGTACGCTCACTCGGCGTGGGTCGTGGCAGAGGATGGTGCGCACTAGGCAGCAGGCGCCGGTGGTGGTGTTCGTGTGTGTTCTGGGATGGGAATGCGTGTTTGCTTCTGTAACGTTGATCAGTGAAGCTATGGAGCGTTTCTTCCCTGGAGCAACTAGCGTTGGAGACTTGGAGAGCTCACAACTCACAAGAGTAAACAAGTTTAGTGGCAATGATCCTTTCAGCTCGGGACGAGCGTTCATTGTCCACTAATGTCATACCGGGATGTATCATGTATGAAGGCTAGCTCAGAAACATAGATAGCTTATTAATTCA]




>consensus_4913#0
CCAACGCCAAGAGATCGTGTCCGAATTGGGTTTGATCTGGACGGCTGGTTTGTTGCTGCA
TACTCTTCTGAAAAATTCAACAAGCAGATGAGGTGCTGGCTTTGTTCCTGATGCTAGTGT
TCCTTCCTTTTTGTCACTTGTCAGTTGTAACTTTCACTATCCATACAACAAACGTAACAA
AATTTCCTTTTCAGAGAACAAAACTGATGATCTGATCGACAACGTCAGTTCTTGTGGATA
GTTCTTGTGTGTGTTGGTCGCATTGCATGCATTTAACAACGAGCTTAGATGATACCTATG
TTCAGCTGATGCCTAATGCCAGCAGCCACAGCCATGTCGATACATCGTACATGGAGCTAA
TCGATGACTCCAATGTAAGCATGGAAAACACCTAAGTAATACATCATATGCCACTCCAGT
GATGAGAGGAGTTCGTCTTGCGGCGCTGCGTTGCTGGAGTTCATGGGGCCAGCCGCGCCG
CCGTCCGAAGCCGCCGCGGCGGCCGACGATGTGGTGCTCCCGTACATCTCGCGTATTCTC
ATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACCCCGCTCTC
CTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTCCAGCATCGCCGGTGAG
GTGAACAGTGCACCCATGGAGGATTCTGCTGCCTTGATGATGCAGGGGAGCGGCAATGGT
AGGGGACGGAAGGGTAGTAAGCATGGCGGGGACGAGCTGGAGGCCGAGGTGGGCAGGGCG
AGCAAACTGATGGCCACGCCGGAGGAGGAGGAGGACGACGACGATGGCGTCGGCGAGATG
TTGGAGAAGATGATGCTCAACGGGGACGAGGACGAGGCATTCCACGGGGAGACGAACGCG
CCGCGCGTCCCCGCGGAGAAGAAGTGCGGGAAGGCGGCGCGGCGGAGGAGGAGGCAGGCC
AAAGGGGAGGTGGTGGACCTGCGCGAGCTGCTCATGTCGTGCGCGCAGGCGGTGGCATCG
GGCAACCGCCGGAGCGCCGGCGAACTCCTGGAGCAGATCAAGCGGCACTCGTCGCCGACA
GGGGACGCCACCGAGCGGCTGGCGCATTACTTCGCCGATGGCCTGGAGGCGCGTCTGGCC
GGCGCGGCGAGCCTGGAGCGCCGGCTGGTCGCGTCCGCGGAGGAGCGCGCGTCGGCCATG
GAGTTGCTGGAGGCGTACCAGGTGTTCATGGCGGCGTGCTGCTTCAAGTGGGTGGCGTTC
ACGTTCGCCAACATGGCCATCCTCCGCGCGGCGGAAGGGAGGAACAGGCTGCACATCGTG
GACTACGGTGGTCAGTACCACGGCCTCCAGTGGCCATCCTTGCTGCAGCGGCTGGCGGAG
AGGGAAGGCGGGCCGCCGGAGGTGAGGATGACGCTCGTAGGCCATCCCCAGCCAGGGTTC
CGGCCAGCCCGACGGCTCGAGAGGACGGGGCGCCGGCTCAGCAACTGCGCGCGCGCGTTC
GGGCTCCCCGTTCAAGTTCCGCGCCGTGGCGGCGGCGAGGTGGGAGACGGTCACCGCCGA
GGACGTCGTCGGCGTCGACCCCGACGACGAGGCGGCGGTCGTCGTGAACGACGTGCTCAG
CCTGGGCACCCTGATGGACGAGAGCGGCGTGTTCGACGACCCGAGCCCGCGGGACACGGT
CCTGGGCAGCATCCGCGACATGCGCCCGGCGGTGTTCGTCCAGGCCGTGGTGAACGGCGC
CCACGGCGCGCCCTTCTTCCCGACGAGGTTCCGGGAGGCGCTCTTCTTCTTCTCGGCGCT
GTTCGACATGCTGGGCGCGACGACGCCGGAGGAGGGGAGCCACCTGCGGGTGGTGCTGGA
GAGGGACGTGCTGAGGCGGGCGGCGGTGGGGGTGATCGCGGGGGAAGGGGCGGAGCGGGT
GGAGCGGCCGGAGACGTACAGGCGGTGGCAGGCGAGGAATCGGCGGGCGGGGCTGAGGCA
GGCGGCGGTGGAGGGCGACGTGGTGGAGGCGGTGAGGAGAAGGGTGAGGAGGAGGCATCA
CGAGGAGTTCGTGATCGAGGAGGATGCAGGGTGGTTGCTGCAGGGGTGGAAGGGGCGCAT
CCTGTACGCTCACTCGGCGTGGGTCGTGGCAGAGGATGGTGCGCACTAGGCAGCAGGCGC
CGGTGGTGGTGTTCGTGTGTGTTCTGGGATGGGAATGCGTGTTTGCTTCTGTAACGTTGA
TCAGTGAAGCTATGGAGCGTTTCTTCCCTGGAGCAACTAGCGTTGGAGACTTGGAGAGCT
CACAACTCACAAGAGTAAACAAGTTTAGTGGCAATGATCCTTTCAGCTCGGGACGAGCGT
TCATTGTCCACTAATGTCATACCGGGATGTATCATGTATGAAGGCTAGCTCAGAAACATA
GATAGCTTATTAATTCA

consensusID : consensus_4913#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2109
fasta sequence 
                              [GACAGGATTTATATAGAATTGCCTCAAGTTGACATGGTAAACATAGTACACAGATGCACAATACAAGTTTGTCCATTTCTCTACATCGTGTTCTGCTCGCCAGGATGAGTTGGGTTTGATCTGGACGGCTGGTTTGTTGCTGCATATTCGTCTGAAAAATTCAACAAGCAGATGAGGTGCTGGCTTTGTTTCTGATGCTAGAGTTCCTTCCTTTTTGTCACTTGTAAGTTGTAACTTTCACTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGATTGACAACGTCAGTTCTTATGTGTGTTGGTCGCATCGCATTTATCAATGAGCTTAGATGATGCCTATGTTCAGCTGATGCCTGATGCCATCAGCCACAGCCATGTCGATACGCTGGCTGATTAGCTGATCGATGACTCCAATGTAAGCATGGAAACCACCTAGTACATCATATGGCACTCCGGTGATGAGAGGAGTTCGTGTTTTCTTGGGGCGCTGCGTTGCTGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGA-AGCCGCCGCGGCGGCCGACGATGTGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTCCGGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTGCCTTGATGATGCAGGGGAGCGGCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGGACGAGCTGGAGGCCGAGGTGGGCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGGACGACGACGACGATGGCGTCGGCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGAGGAGATGAACGCGCCACGCGTCCCCGCGGAGAAAAACGGCGGGAAGGCGGCGCGGCGGAAGAGGAGGCAGGGCAAGGGGGAGGTGGTGGACCTGCGCGAGCTGCTCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCCGGAGCGCCGGCGAACTCCTGGAGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCACCGAGCGGCTGGCGCATTACTTCGCCGACGGCCTGGAGGCGCGGCTGGCCGGCGCGGCGAGCCTGGAGCACCGGCTGCTCGCGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGGAAGCGTACCAGGTGTTCATGGCGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCAACATGGCCATCCTCCGCGCGGCGGAAGGGAGGAGCAAGGTGCACATCGTGGACTACGGCGGTCAGTACCACGGCCTCCAGTGGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCGGGCCACCGGAGGTGAGGATGACGCTCGTCGGCCACCCGCAGCCAGGTTTCCGGCCAGCCCGACGGCTCGAGAGGACGGGGCGCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCCATTCAAGTTCCGCGCCGTGGCGGCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCGGCGTCGACCACGACGAGGCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGATGGACGAGAGCGGCGTGTTCGACGACCCGAGCCCTCGGGACACGGTCCTCGGCAGCATCCGCGACATGCGCCCGGCGGTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCTTCTTCCCGACGAGGTTCCGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGGACGCGACGACGCCGGAGGAGGGGAGCCACCTGCGGGCGGTGCTGGAGAGGGACGTGCTGAGGCGGGCGGCGGTGGGGGTGATCGCCGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGACGTACAGGCGGTGGCAGGCGAGGAATCGGCGCGCGGGGCTGAGACAGGTGGCGGTGGAGGCCGACGTGGTGGAGGCGGTGAGGCGCAGGGTGAGGAGGCGGCATCACGAGGAATTCGTGATCGAGGAGG]

[-] EMBL AK106901             [GACAGGATTTATATAGAATTGCCTCAAGTTGACATGGTAAACATAGTACACAGATGCACAATACAAGTTTGTCCATTTCTCTACATCGTGTTCTGCTCGCCAGGATGAGTTGGGTTTGATCTGGACGGCTGGTTTGTTGCTGCATATTCGTCTGAAAAATTCAACAAGCAGATGAGGTGCTGGCTTTGTTTCTGATGCTAGAGTTCCTTCCTTTTTGTCACTTGTAAGTTGTAACTTTCACTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGATTGACAACGTCAGTTCTTATGTGTGTTGGTCGCATCGCATTTATCAATGAGCTTAGATGATGCCTATGTTCAGCTGATGCCTGATGCCATCAGCCACAGCCATGTCGATACGCTGGCTGATTAGCTGATCGATGACTCCAATGTAAGCATGGAAACCACCTAGTACATCATATGGCACTCCGGTGATGAGAGGAGTTCGTGTTTTCTTGGGGCGCTGCGTTGCTGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGA AGCCGCCGCGGCGGCCGACGATGTGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTCCGGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTGCCTTGATGATGCAGGGGAGCGGCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGGACGAGCTGGAGGCCGAGGTGGGCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGGACGACGACGACGATGGCGTCGGCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGAGGAGATGAACGCGCCACGCGTCCCCGCGGAGAAAAACGGCGGGAAGGCGGCGCGGCGGAAGAGGAGGCAGGGCAAGGGGGAGGTGGTGGACCTGCGCGAGCTGCTCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCCGGAGCGCCGGCGAACTCCTGGAGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCACCGAGCGGCTGGCGCATTACTTCGCCGACGGCCTGGAGGCGCGGCTGGCCGGCGCGGCGAGCCTGGAGCACCGGCTGCTCGCGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGGAAGCGTACCAGGTGTTCATGGCGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCAACATGGCCATCCTCCGCGCGGCGGAAGGGAGGAGCAAGGTGCACATCGTGGACTACGGCGGTCAGTACCACGGCCTCCAGTGGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCGGGCCACCGGAGGTGAGGATGACGCTCGTCGGCCACCCGCAGCCAGGTTTCCGGCCAGCCCGACGGCTCGAGAGGACGGGGCGCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCCATTCAAGTTCCGCGCCGTGGCGGCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCGGCGTCGACCACGACGAGGCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGATGGACGAGAGCGGCGTGTTCGACGACCCGAGCCCTCGGGACACGGTCCTCGGCAGCATCCGCGACATGCGCCCGGCGGTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCTTCTTCCCGACGAGGTTCCGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGGACGCGACGACGCCGGAGGAGGGGAGCCACCTGCGGGCGGTGCTGGAGAGGGACGTGCTGAGGCGGGCGGCGGTGGGGGTGATCGCCGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGACGTACAGGCGGTGGCAGGCGAGGAATCGGCGCGCGGGGCTGAGACAGGTGGCGGTGGAGGCCGACGTGGTGGAGGCGGTGAGGCGCAGGGTGAGGAGGCGGCATCACGAGGAATTCGTGATCGAGGAGG]
[-] EMBL OSC31321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGANAG CGCCGCGGCGGCCNACGATGTGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTGCGGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_4913#1
GACAGGATTTATATAGAATTGCCTCAAGTTGACATGGTAAACATAGTACACAGATGCACA
ATACAAGTTTGTCCATTTCTCTACATCGTGTTCTGCTCGCCAGGATGAGTTGGGTTTGAT
CTGGACGGCTGGTTTGTTGCTGCATATTCGTCTGAAAAATTCAACAAGCAGATGAGGTGC
TGGCTTTGTTTCTGATGCTAGAGTTCCTTCCTTTTTGTCACTTGTAAGTTGTAACTTTCA
CTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGAT
TGACAACGTCAGTTCTTATGTGTGTTGGTCGCATCGCATTTATCAATGAGCTTAGATGAT
GCCTATGTTCAGCTGATGCCTGATGCCATCAGCCACAGCCATGTCGATACGCTGGCTGAT
TAGCTGATCGATGACTCCAATGTAAGCATGGAAACCACCTAGTACATCATATGGCACTCC
GGTGATGAGAGGAGTTCGTGTTTTCTTGGGGCGCTGCGTTGCTGGAGTTCATGGGGCCAG
CCGCGCCGCCGTCCGAAGCCGCCGCGGCGGCCGACGATGTGGTGCTCCCGTACATCTCGC
GTATTCTCATGGAGGAGGACATCGACGACGACATGTTCTTCTGCCTGTACCCCGACCACC
CCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCCTCTCCTCCTCCTCCGGCATCG
CCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTGCCTTGATGATGCAGGGGAGCG
GCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGGACGAGCTGGAGGCCGAGGTGG
GCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGGACGACGACGACGATGGCGTCG
GCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGAGGAGATGAACGCGCCACGCGTCC
CCGCGGAGAAAAACGGCGGGAAGGCGGCGCGGCGGAAGAGGAGGCAGGGCAAGGGGGAGG
TGGTGGACCTGCGCGAGCTGCTCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCC
GGAGCGCCGGCGAACTCCTGGAGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCA
CCGAGCGGCTGGCGCATTACTTCGCCGACGGCCTGGAGGCGCGGCTGGCCGGCGCGGCGA
GCCTGGAGCACCGGCTGCTCGCGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGG
AAGCGTACCAGGTGTTCATGGCGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCA
ACATGGCCATCCTCCGCGCGGCGGAAGGGAGGAGCAAGGTGCACATCGTGGACTACGGCG
GTCAGTACCACGGCCTCCAGTGGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCG
GGCCACCGGAGGTGAGGATGACGCTCGTCGGCCACCCGCAGCCAGGTTTCCGGCCAGCCC
GACGGCTCGAGAGGACGGGGCGCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCCAT
TCAAGTTCCGCGCCGTGGCGGCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCG
GCGTCGACCACGACGAGGCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGA
TGGACGAGAGCGGCGTGTTCGACGACCCGAGCCCTCGGGACACGGTCCTCGGCAGCATCC
GCGACATGCGCCCGGCGGTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCT
TCTTCCCGACGAGGTTCCGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGG
ACGCGACGACGCCGGAGGAGGGGAGCCACCTGCGGGCGGTGCTGGAGAGGGACGTGCTGA
GGCGGGCGGCGGTGGGGGTGATCGCCGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGA
CGTACAGGCGGTGGCAGGCGAGGAATCGGCGCGCGGGGCTGAGACAGGTGGCGGTGGAGG
CCGACGTGGTGGAGGCGGTGAGGCGCAGGGTGAGGAGGCGGCATCACGAGGAATTCGTGA
TCGAGGAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4913#0      ------------------------------------------------------------
consensus_4913#1      GACAGGATTTATATAGAATTGCCTCAAGTTGACATGGTAAACATAGTACACAGATGCACA 60
                                                                                  

consensus_4913#0      ----------------------CCAACGCCAAGAGATCGT--GTCCGAATTGGGTTTGAT 36
consensus_4913#1      ATACAAGTTTGTCCATTTCTCTACATCGTGTTCTGCTCGCCAGGATGAGTTGGGTTTGAT 120
                                             ** **      * ***   *   ** ***********

consensus_4913#0      CTGGACGGCTGGTTTGTTGCTGCATACTCTTCTGAAAAATTCAACAAGCAGATGAGGTGC 96
consensus_4913#1      CTGGACGGCTGGTTTGTTGCTGCATATTCGTCTGAAAAATTCAACAAGCAGATGAGGTGC 180
                      ************************** ** ******************************

consensus_4913#0      TGGCTTTGTTCCTGATGCTAGTGTTCCTTCCTTTTTGTCACTTGTCAGTTGTAACTTTCA 156
consensus_4913#1      TGGCTTTGTTTCTGATGCTAGAGTTCCTTCCTTTTTGTCACTTGTAAGTTGTAACTTTCA 240
                      ********** ********** *********************** **************

consensus_4913#0      CTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGAT 216
consensus_4913#1      CTATCCATACAACAAACGTAACAAAATTTCCTTTTCAGAGAACAAAACTGATGATCTGAT 300
                      ************************************************************

consensus_4913#0      CGACAACGTCAGTTCTTGTGGATAGTTCTTGTGTGTGTTGGTCGCATTGCATGCATTTAA 276
consensus_4913#1      TGACAACGTCAGTTCT-------------TATGTGTGTTGGTCGCATCGCAT----TTAT 343
                       ***************             * **************** ****    *** 

consensus_4913#0      CAACGAGCTTAGATGATACCTATGTTCAGCTGATGCCTAATGCCAGCAGCCACAGCCATG 336
consensus_4913#1      CAATGAGCTTAGATGATGCCTATGTTCAGCTGATGCCTGATGCCATCAGCCACAGCCATG 403
                      *** ************* ******************** ****** **************

consensus_4913#0      TCGATACATCGTACATGGAGCTAATCGATGACTCCAATGTAAGCATGGAAAACACCTAAG 396
consensus_4913#1      TCGATACGCTGGCTGATTAGCTGATCGATGACTCCAATGTAAGCATGGAAACCACC---- 459
                      *******   *       **** **************************** ****    

consensus_4913#0      TAATACATCATATGCCACTCCAGTGATGAGAGGAGTTCGT-----CTTGCGGCGCTGCGT 451
consensus_4913#1      TAGTACATCATATGGCACTCCGGTGATGAGAGGAGTTCGTGTTTTCTTGGGGCGCTGCGT 519
                      ** *********** ****** ******************     **** **********

consensus_4913#0      TGCTGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGAAGCCGCCGCGGCGGCCGACGATG 511
consensus_4913#1      TGCTGGAGTTCATGGGGCCAGCCGCGCCGCCGTCCGAAGCCGCCGCGGCGGCCGACGATG 579
                      ************************************************************

consensus_4913#0      TGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCT 571
consensus_4913#1      TGGTGCTCCCGTACATCTCGCGTATTCTCATGGAGGAGGACATCGACGACGACATGTTCT 639
                      ************************************************************

consensus_4913#0      TCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCC 631
consensus_4913#1      TCTGCCTGTACCCCGACCACCCCGCTCTCCTCGAGGCGCAGCAGCCGTTCGCCCAGATCC 699
                      ************************************************************

consensus_4913#0      TCTCCTCCTCCTCCAGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTG 691
consensus_4913#1      TCTCCTCCTCCTCCGGCATCGCCGGTGAGGTGAACAGTGCACCCATGGAGGATTCTGCTG 759
                      ************** *********************************************

consensus_4913#0      CCTTGATGATGCAGGGGAGCGGCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGG 751
consensus_4913#1      CCTTGATGATGCAGGGGAGCGGCAATGGTAGGGGACGGAAGGGTAGTAAGCATGGCGGGG 819
                      ************************************************************

consensus_4913#0      ACGAGCTGGAGGCCGAGGTGGGCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGG 811
consensus_4913#1      ACGAGCTGGAGGCCGAGGTGGGCAGGGCGAGCAAACTGATGGCCACGCCGGAGGAGGAGG 879
                      ************************************************************

consensus_4913#0      AGGACGACGACGATGGCGTCGGCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGAGG 871
consensus_4913#1      ACGACGACGACGATGGCGTCGGCGAGATGTTGGAGAAGATGATGCTCAACGGGGACGA-- 937
                      * ********************************************************  

consensus_4913#0      ACGAGGCATTCCACGGGGAGACGAACGCGCCGCGCGTCCCCGCGGAGAAGAAGTGCGGGA 931
consensus_4913#1      ----------------GGAGATGAACGCGCCACGCGTCCCCGCGGAGAAAAACGGCGGGA 981
                                      ***** ********* ***************** **  ******

consensus_4913#0      AGGCGGCGCGGCGGAGGAGGAGGCAGGCCAAAGGGGAGGTGGTGGACCTGCGCGAGCTGC 991
consensus_4913#1      AGGCGGCGCGGCGGAAGAGGAGGCAGGGCAAGGGGGAGGTGGTGGACCTGCGCGAGCTGC 1041
                      *************** *********** *** ****************************

consensus_4913#0      TCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCCGGAGCGCCGGCGAACTCCTGG 1051
consensus_4913#1      TCATGTCGTGCGCGCAGGCGGTGGCATCGGGCAACCGCCGGAGCGCCGGCGAACTCCTGG 1101
                      ************************************************************

consensus_4913#0      AGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCACCGAGCGGCTGGCGCATTACT 1111
consensus_4913#1      AGCAGATCAAGCGGCACTCGTCGCCGACAGGGGACGCCACCGAGCGGCTGGCGCATTACT 1161
                      ************************************************************

consensus_4913#0      TCGCCGATGGCCTGGAGGCGCGTCTGGCCGGCGCGGCGAGCCTGGAGCGCCGGCTGGTCG 1171
consensus_4913#1      TCGCCGACGGCCTGGAGGCGCGGCTGGCCGGCGCGGCGAGCCTGGAGCACCGGCTGCTCG 1221
                      ******* ************** ************************* ******* ***

consensus_4913#0      CGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGGAGGCGTACCAGGTGTTCATGG 1231
consensus_4913#1      CGTCCGCGGAGGAGCGCGCGTCGGCCATGGAGTTGCTGGAAGCGTACCAGGTGTTCATGG 1281
                      **************************************** *******************

consensus_4913#0      CGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCAACATGGCCATCCTCCGCGCGG 1291
consensus_4913#1      CGGCGTGCTGCTTCAAGTGGGTGGCGTTCACGTTCGCCAACATGGCCATCCTCCGCGCGG 1341
                      ************************************************************

consensus_4913#0      CGGAAGGGAGGAACAGGCTGCACATCGTGGACTACGGTGGTCAGTACCACGGCCTCCAGT 1351
consensus_4913#1      CGGAAGGGAGGAGCAAGGTGCACATCGTGGACTACGGCGGTCAGTACCACGGCCTCCAGT 1401
                      ************ ** * ******************* **********************

consensus_4913#0      GGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCGGGCCGCCGGAGGTGAGGATGA 1411
consensus_4913#1      GGCCATCCTTGCTGCAGCGGCTGGCGGAGAGGGAAGGCGGGCCACCGGAGGTGAGGATGA 1461
                      ******************************************* ****************

consensus_4913#0      CGCTCGTAGGCCATCCCCAGCCAGGGTTCCGGCCAGCCCGACGGCTCGAGAGGACGGGGC 1471
consensus_4913#1      CGCTCGTCGGCCACCCGCAGCCAGGTTTCCGGCCAGCCCGACGGCTCGAGAGGACGGGGC 1521
                      ******* ***** ** ******** **********************************

consensus_4913#0      GCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCCCGTTCAAGTTCCGCGCCGTGGCG 1531
consensus_4913#1      GCCGGCTCAGCAACTGCGCGCGCGCGTTCGGGCTCCC-ATTCAAGTTCCGCGCCGTGGCG 1580
                      *************************************  *********************

consensus_4913#0      GCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCGGCGTCGACCCCGACGACGAG 1591
consensus_4913#1      GCGGCGAGGTGGGAGACGGTCACCGCCGAGGACGTCGTCGGCGTCGACC---ACGACGAG 1637
                      *************************************************   ********

consensus_4913#0      GCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGATGGACGAGAGCGGCGTG 1651
consensus_4913#1      GCGGCGGTCGTCGTGAACGACGTGCTCAGCCTGGGCACCCTGATGGACGAGAGCGGCGTG 1697
                      ************************************************************

consensus_4913#0      TTCGACGACCCGAGCCCGCGGGACACGGTCCTGGGCAGCATCCGCGACATGCGCCCGGCG 1711
consensus_4913#1      TTCGACGACCCGAGCCCTCGGGACACGGTCCTCGGCAGCATCCGCGACATGCGCCCGGCG 1757
                      ***************** ************** ***************************

consensus_4913#0      GTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCTTCTTCCCGACGAGGTTC 1771
consensus_4913#1      GTGTTCGTCCAGGCCGTGGTGAACGGCGCCCACGGCGCGCCCTTCTTCCCGACGAGGTTC 1817
                      ************************************************************

consensus_4913#0      CGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGGGCGCGACGACGCCGGAG 1831
consensus_4913#1      CGGGAGGCGCTCTTCTTCTTCTCGGCGCTGTTCGACATGCTGGACGCGACGACGCCGGAG 1877
                      ******************************************* ****************

consensus_4913#0      GAGGGGAGCCACCTGCGGGTGGTGCTGGAGAGGGACGTGCTGAGGCGGGCGGCGGTGGGG 1891
consensus_4913#1      GAGGGGAGCCACCTGCGGGCGGTGCTGGAGAGGGACGTGCTGAGGCGGGCGGCGGTGGGG 1937
                      ******************* ****************************************

consensus_4913#0      GTGATCGCGGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGACGTACAGGCGGTGGCAG 1951
consensus_4913#1      GTGATCGCCGGGGAAGGGGCGGAGCGGGTGGAGCGGCCGGAGACGTACAGGCGGTGGCAG 1997
                      ******** ***************************************************

consensus_4913#0      GCGAGGAATCGGCGGGCGGGGCTGAGGCAGGCGGCGGTGGAGGGCGACGTGGTGGAGGCG 2011
consensus_4913#1      GCGAGGAATCGGCGCGCGGGGCTGAGACAGGTGGCGGTGGAGGCCGACGTGGTGGAGGCG 2057
                      ************** *********** **** *********** ****************

consensus_4913#0      GTGAGGAGAAGGGTGAGGAGGAGGCATCACGAGGAGTTCGTGATCGAGGAGGATGCAGGG 2071
consensus_4913#1      GTGAGGCGCAGGGTGAGGAGGCGGCATCACGAGGAATTCGTGATCGAGGAGG-------- 2109
                      ****** * ************ ************* ****************        

consensus_4913#0      TGGTTGCTGCAGGGGTGGAAGGGGCGCATCCTGTACGCTCACTCGGCGTGGGTCGTGGCA 2131
consensus_4913#1      ------------------------------------------------------------
                                                                                  

consensus_4913#0      GAGGATGGTGCGCACTAGGCAGCAGGCGCCGGTGGTGGTGTTCGTGTGTGTTCTGGGATG 2191
consensus_4913#1      ------------------------------------------------------------
                                                                                  

consensus_4913#0      GGAATGCGTGTTTGCTTCTGTAACGTTGATCAGTGAAGCTATGGAGCGTTTCTTCCCTGG 2251
consensus_4913#1      ------------------------------------------------------------
                                                                                  

consensus_4913#0      AGCAACTAGCGTTGGAGACTTGGAGAGCTCACAACTCACAAGAGTAAACAAGTTTAGTGG 2311
consensus_4913#1      ------------------------------------------------------------
                                                                                  

consensus_4913#0      CAATGATCCTTTCAGCTCGGGACGAGCGTTCATTGTCCACTAATGTCATACCGGGATGTA 2371
consensus_4913#1      ------------------------------------------------------------
                                                                                  

consensus_4913#0      TCATGTATGAAGGCTAGCTCAGAAACATAGATAGCTTATTAATTCA 2417
consensus_4913#1      ----------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)