cluster # 4929

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Oryza sativa
cluster # 4929 cluster # 4929 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4929#0 length = 1328 sequences # 3
consensusID : consensus_4929#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1328
fasta sequence
                              [TCTCAACACGCGCGCA-CGGGGCGGCATGG-CGGTCGTCAGCGGCGGGAAGCGCGCGCTCCTCGTCGGCGTGAGCTACAAGGGCGACACCAGCAGAGAGCTGACGGGCGCGGCCGAAGACGTCAAGAACATGAACAGCCTCCTCAAAAAATTCCTCTTCCCCGAGGAATCCATCCACATGCTCACCGAGGAGTTGGGCGCCAAGGACCCGTTGAAGGCGCCGACGAGGGAGAACATTATGAAGGAGATGCGGTGGCTGGTGGAGGGGTGCCGCGCCGGCGACTCGCTGGTGTTCCACTTCTCCGGCCACGGCCGGCAGAGGAAGGACGACAACGGCGACGAGGTGGACGGCCGAGACGAGGAGCTCTGCCCAGTGGACTACAAGGTGAGCGGCAACATCTTGGACGACGACATCAACGATGCCATCGTCAAGCCGCTCACCCAAGGCGTGAAGCTGCACGCCATCATCGACACCTGCCACAGCGGCACCATGCTCGACCTCCCCTACCTCTGCCGCTTTAACAGAATGGGTCTATGTTCAAGATACAAGTGGGTTGGCCAAACGCGTTGGCGACTATCCCCAAAGAAAGAGTGGGCGATGGTCCCCGTAGGCGGCCACGCCATCTCCATCAGCGGCTGCAAGGACTACCAGAATTCTCTAGAGCCAGACAACACCGCCGGCGGCGGCGTCATGACATGGAGCTTCCTGGAGGCAGTGGGATCGCGGAGGACGATGACGTATGGGGAGCTGCTGGACTCGATGCGGGCGAAGGTACACCATAGGTTGCAGCAAAGCAGCTCCGGCAAGTGCCTCGTAACGGGCTGCCTCGGCTCGCTCGCCGCCAAGTGTCTCCCCTGCTGCTTCCTCAGCGTGCAGGAGCCGCAGCTCTGTTCGTCGAAGGAGTTCAACGTCTACGAGGAGCAGTTTATCCTGTGACCGACCGCATTGTCCCGGGCACAAGCTCCATTCAGATGAAAACCTCTGCTCCTCCAGCTCCATTCTAATTGCGGATGCTGGATATCATACACGTAGGCTCGCTTTCTTAAAATAAAATTTAAATATTATTGTTCGTAGAAAAGAGTATGATAGTGTGATATCAAAATGTGGACGAGGAAAAAAACCGTGTTCTAAGTATCGTGTATTAGCGAAGGATATATGTTGCTCTGTTGCTGCGGCCATGGCCATGCATGTGTGTTCTTACAAAAACTCAAGCGTGTGATCATATTTATAATAAGGTAGCGCAGAGCGACGGATTGGAACTGAAATTGTGTAATTGAGCGTGTACTTTGTATTGTCCAAATCTGTTTTTATAATTTGTAAGTTTGTTAAG]

[+] EMBL AK063170             [TCTCAACACGCGCGCA CGGGGCGGCATGG CGGTCGTCAGCGGCGGGAAGCGCGCGCTCCTCGTCGGCGTGAGCTACAAGGGCGACACCAGCAGAGAGCTGACGGGCGCGGCCGAAGACGTCAAGAACATGAACAGCCTCCTCAAAAAATTCCTCTTCCCCGAGGAATCCATCCACATGCTCACCGAGGAGTTGGGCGCCAAGGACCCGTTGAAGGCGCCGACGAGGGAGAACATTATGAAGGAGATGCGGTGGCTGGTGGAGGGGTGCCGCGCCGGCGACTCGCTGGTGTTCCACTTCTCCGGCCACGGCCGGCAGAGGAAGGACGACAACGGCGACGAGGTGGACGGCCGAGACGAGGAGCTCTGCCCAGTGGACTACAAGGTGAGCGGCAACATCTTGGACGACGACATCAACGATGCCATCGTCAAGCCGCTCACCCAAGGCGTGAAGCTGCACGCCATCATCGACACCTGCCACAGCGGCACCATGCTCGACCTCCCCTACCTCTGCCGCTTTAACAGAATGGGTCTATGTTCAAGATACAAGTGGGTTGGCCAAACGCGTTGGCGACTATCCCCAAAGAAAGAGTGGGCGATGGTCCCCGTAGGCGGCCACGCCATCTCCATCAGCGGCTGCAAGGACTACCAGAATTCTCTAGAGCCAGACAACACCGCCGGCGGCGGCGTCATGACATGGAGCTTCCTGGAGGCAGTGGGATCGCGGAGGACGATGACGTATGGGGAGCTGCTGGACTCGATGCGGGCGAAGGTACACCATAGGTTGCAGCAAAGCAGCTCCGGCAAGTGCCTCGTAACGGGCTGCCTCGGCTCGCTCGCCGCCAAGTGTCTCCCCTGCTGCTTCCTCAGCGTGCAGGAGCCGCAGCTCTGTTCGTCGAAGGAGTTCAACGTCTACGAGGAGCAGTTTATCCTGTGACCGACCGCATTGTCCCGGGCACAAGCTCCATTCAGATGAAAACCTCTGCTCCTCCAGCTCCATTCTAATTGCGGATGCTGGATATCATACACGTAGGCTCGCTTTCTTAAAATAAAATTTAAATATTATTGTTCGTAGAAAAGAGTATGATAGTGTGATATCAAAATGTGGACGAGGAAAAAAACCGTGTTCTAAGTATCGTGTATTAGCGAAGGATATATGTTGCTCTGTTGCTGCGGCCATGGCCATGCATGTGTGTTCTTACAAAAACTCAAGCGTGTGATCATATTTATAATAAGGTAGCGCAGAGCGACGGATTGGAACTGAAATTGTGTAATTGAGCGTGTACTTTGTATTGTCCAAATCTGTTTTTATAATTTGTAAGTTTGTTAAG]
[+] EMBL CB650255             [          CGCGCACCGGTGCGGCATGGTCGGTCGTCAGCGGCGGGAAGCGCGCGCTCCTCGTCGGCGTGAGCTACAAGGGCGACACCATCAGAGAGCTGACGGGCGCGGCCGAAGACGTCAAGAACATGAACAGCCTCCTCAAAAAATTCCTCTTCCCCGAGGAATCCATCCACATGCTCACCGAGGAGTTGGGCGCCAAGGACCCGTTGAAGGCGCCGACGAGGGAGAACATTATGAAGGAGATGCGGTGGCTGGTGGAGGGGTGCCGCGCCGGCGACTCGCTGGTGTTCCACTTCTCCGGCCACGGCCGGCAGAGGAAGGACGACAACGGCGACGAGGTGGACGGCCGAGACGAGGAGCTCTGCCCAGTGGACTACAAGGTGAGCGGCAACATCTTGGACGACGACATCAACGATGCCATCGTCAAGCCGCTCACCCAAGGCGTGAAGCTGCACGCCATCATCGACACCTGCCACAGCGGCACCATGCTCGACCTCCCCTACCTCTGCCGCTTTAACAGAATGGGTCTATGTTCAAGATACAAGTGGGTTGGCCAAACGCGTTGGCGACTATCCCCAAAGAAAGAGTGGGCGATGGTCCCCGTAGGCGGCCACGCCATCTCCATCAGCGGCTGCAAGGACTACCAGAATTCTCTAGAGCCAGACAACACCGCCGGCGGCGGCGTCATGACATGGAGCTTCCTGGAGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB650256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCGAAGGTACCCCATAGGTTGCAGCAAAGCAGCTCCGGCAAGTGCCTCGTAACGGGGTGCCTCGGCTCGCTCGCCGCCAAGTGTCTCCCCTGCTGCTTCCTCAGCGTGCAGGAGCCGCAGCTATGTTCGTCGAAGGAGTTCAACGTATATGAGGAGCAGTTTATCCTGTGACCGCCCGCATTGTCCCGGGCACAAGCTCCATTCAGATGAAAACCTCTGGTCCTCCAGGTCCATTTTAATTGCGGATGCTGGATATCATACACGTAGGCTCGCTTTCTTAAAATAAAATTTCAATATTATc                                                                                                                                                                                                                                                                        ]




>consensus_4929#0
TCTCAACACGCGCGCACGGGGCGGCATGGCGGTCGTCAGCGGCGGGAAGCGCGCGCTCCT
CGTCGGCGTGAGCTACAAGGGCGACACCAGCAGAGAGCTGACGGGCGCGGCCGAAGACGT
CAAGAACATGAACAGCCTCCTCAAAAAATTCCTCTTCCCCGAGGAATCCATCCACATGCT
CACCGAGGAGTTGGGCGCCAAGGACCCGTTGAAGGCGCCGACGAGGGAGAACATTATGAA
GGAGATGCGGTGGCTGGTGGAGGGGTGCCGCGCCGGCGACTCGCTGGTGTTCCACTTCTC
CGGCCACGGCCGGCAGAGGAAGGACGACAACGGCGACGAGGTGGACGGCCGAGACGAGGA
GCTCTGCCCAGTGGACTACAAGGTGAGCGGCAACATCTTGGACGACGACATCAACGATGC
CATCGTCAAGCCGCTCACCCAAGGCGTGAAGCTGCACGCCATCATCGACACCTGCCACAG
CGGCACCATGCTCGACCTCCCCTACCTCTGCCGCTTTAACAGAATGGGTCTATGTTCAAG
ATACAAGTGGGTTGGCCAAACGCGTTGGCGACTATCCCCAAAGAAAGAGTGGGCGATGGT
CCCCGTAGGCGGCCACGCCATCTCCATCAGCGGCTGCAAGGACTACCAGAATTCTCTAGA
GCCAGACAACACCGCCGGCGGCGGCGTCATGACATGGAGCTTCCTGGAGGCAGTGGGATC
GCGGAGGACGATGACGTATGGGGAGCTGCTGGACTCGATGCGGGCGAAGGTACACCATAG
GTTGCAGCAAAGCAGCTCCGGCAAGTGCCTCGTAACGGGCTGCCTCGGCTCGCTCGCCGC
CAAGTGTCTCCCCTGCTGCTTCCTCAGCGTGCAGGAGCCGCAGCTCTGTTCGTCGAAGGA
GTTCAACGTCTACGAGGAGCAGTTTATCCTGTGACCGACCGCATTGTCCCGGGCACAAGC
TCCATTCAGATGAAAACCTCTGCTCCTCCAGCTCCATTCTAATTGCGGATGCTGGATATC
ATACACGTAGGCTCGCTTTCTTAAAATAAAATTTAAATATTATTGTTCGTAGAAAAGAGT
ATGATAGTGTGATATCAAAATGTGGACGAGGAAAAAAACCGTGTTCTAAGTATCGTGTAT
TAGCGAAGGATATATGTTGCTCTGTTGCTGCGGCCATGGCCATGCATGTGTGTTCTTACA
AAAACTCAAGCGTGTGATCATATTTATAATAAGGTAGCGCAGAGCGACGGATTGGAACTG
AAATTGTGTAATTGAGCGTGTACTTTGTATTGTCCAAATCTGTTTTTATAATTTGTAAGT
TTGTTAAG
clustalw multiple alignements is not computed in this case