cluster # 4936

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Oryza sativa
cluster # 4936 cluster # 4936 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4936#0 length = 378 sequences # 3

consensusID : consensus_4936#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 378
fasta sequence

                              [CAACGCCTTCAGGCAGAGCAGCGTGCAGCGATGCAGGCAGCAGAGAAGCTGCACAGGGAGAAATTGGCTGCAGAAAAAGAAGGGGAGAAAGAAGAGGAGACTGATACCAATGCAGACCCCATGGCTGCAGCAGAAGCTCAGGCCTTGAAACAGAGCTCTTAAATCCTTGTGTATTAATGTTAGAACAGGTAGTACTGCAGGCATGTCCATTTGTCAAATGCATGCTATTCTAAATCCGTCGGTGCAACTAACATGCTATTCTCTGCGGACTTGCTAAGCTAGTTGTTAAGTTGGAGCTTTCTGTTCATACTGCCTGTGTACCACTAGTAACATGGATTTTGGGGCTATGAAAAATTGATTTGTGTTTAAAAAAAAAAA]

[+] EMBL AK059328             [CAACGCCTTCAGGCAGAGCAGCGTGCAGCGATGCAGGCAGCAGAGAAGCTGCACAGGGAGAAATTGGCTGCAGAAAAAGAAGGGGAGAAAGAAGAGGAGACTGATACCAATGCAGACCCCATGGCTGCAGCAGAAGCTCAGGCCTTGAAACAGAGCTCTTAAATCCTTGTGTATTAATGTTAGAACAGGTAGTACTGCAGGCATGTCCATTTGTCAAATGCATGCTATTCTAAATCCGTCGGTGCAACTAACATGCTATTCTCTGCGGACTTGCTAAGCTAGTTGTTAAGTTGGAGCTTTCTGTTCATACTGCCTGTGTACCACTAGTAACATGGATTTTGGGGCTATGAAAAATTG                     ]
[+] EMBL CF332053             [                                                                                                                                                                                                                                                                                         GTTGTTAAGTTGGAGCTTTCTGTT ATACTGCCTGTGTACCACTAGTAACATGGATTTTGGGGCTATGAAAAATTGATTTGTGTTTAAAAAAAAAA ]
[-] EMBL CF332052             [                                                                                                                                                                                                                                                                                          TTGTTAAGTTGGAGCTTTCTGTTCATACTGCCTGTGTACCACTAGTAACATGGATTTTGGGGCTATGAAAAATTGATTTGTGTTTAAAAAAAAAAA]




>consensus_4936#0
CAACGCCTTCAGGCAGAGCAGCGTGCAGCGATGCAGGCAGCAGAGAAGCTGCACAGGGAG
AAATTGGCTGCAGAAAAAGAAGGGGAGAAAGAAGAGGAGACTGATACCAATGCAGACCCC
ATGGCTGCAGCAGAAGCTCAGGCCTTGAAACAGAGCTCTTAAATCCTTGTGTATTAATGT
TAGAACAGGTAGTACTGCAGGCATGTCCATTTGTCAAATGCATGCTATTCTAAATCCGTC
GGTGCAACTAACATGCTATTCTCTGCGGACTTGCTAAGCTAGTTGTTAAGTTGGAGCTTT
CTGTTCATACTGCCTGTGTACCACTAGTAACATGGATTTTGGGGCTATGAAAAATTGATT
TGTGTTTAAAAAAAAAAA

clustalw multiple alignements is not computed in this case