cluster # 4949

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Oryza sativa
cluster # 4949 cluster # 4949 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4949#0 length = 724 sequences # 3

consensusID : consensus_4949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 724
fasta sequence

                              [GTGTTCCTTACACACCAAGGAAACAGTTTTTGATTGGCAACAACAGTTTCAGCAGTTTGCAGCTTATGCAACACACGCGAATCCAATCTACGGAGCCTCCTTCCTTGTTTTCACTGTTGTCTTGGTGGGAGTGGTCTGTGCTTGTTGCAAGTTTGCAAGAAGGCGTGCTAGTGGAGTCCCATATCAGCAACTTGAGATGGGAGCCCAAGCCCCCAACTCATCAGGCGTGGAAAACACTACAAGCACTGTG-GATGGTTGGGAAGATGGCTGGGATGATGACTGGGATGATGAAGAAGCGGCAGCAAAACCTTCAGATAAGAAACCATCTGGAAGTATCTCTGCAAATGGCCTTTCTTTGAGACCTCAGACCAATAGCAAAGATGGCTGGGATGTAGATTGGGATGACTAAGCTGCATAGAATGTTGAGAAATGTGATCTGGACGAGCTGCAGAAAAAGCACAGACAAACTGATAGCATCTGTGATTGACAAGGTCACTCGCATTCTGGAAGATAGGTTTGTCTGTCTTCATACGGTTTGTACCATATTGTTCCACTACTACTTTTTGTTTCTAGGCTGATACACAAACTGTTAGTGGGTACAAATTGTAATTTCGGTAGTAACACAACAGCACGGGTTTCTTAGTTACATGACCAAAACACCGACCTGTAATTTTTTTGACAGAGGTAACTATCATTGGNTTTTCCATTCGTAAAAAAATCAGAT]

[+] EMBL CA765879             [GTGTTCCTTACACACCAAGGAAACAGTTTTTGATTGGCAACAACAGTTTCAGCAGTTTGCAGCTTATGCAACACACGCGAATCCAATCTACGGAGCCTCCTTCCTTGTTTTCACTGTTGTCTTGGTGGGAGTGGTCTGTGCTTGTTGCAAGTTTGCAAGAAGGCGTGCTAGTGGAGTCCCATATCAGCAACTTGAGATGGGAGCCCAAGCCCCCAACTCATCAGGCGTGGAAAACACTATAAGCACTGTG GATGGTTGGGAAGATGGCTGGGATGATGACTGGGATGATGAAGAAGCGGCAGCAAAACCTTCAGATAAGAAACCATCTGGAAGTATCTCTGCAAATGGCCTTTCTTTGAGACCTCAGACCAATAGCAAAGATGGCTGGGATGTAGATTGGGATGACTAAGCTGCATAGAATGTTGAGAAATGTGATCTGGACGAGCTGCAGAAAAAGCACAGACAAACTGATAGCATCTGTGATTGACAAGGTCACTCGCATTCTGGAAGATAGGTTTGTCTGTCTTCATACGGTTTGTACCATATTGTTCCACTACTACTTTTTGGTTCTAGGCTGATACACAAACTGTTAGTGGGTACAAATTGTAATTTCGGTAGTAACACAACAGCACGGGTTTCTTAGTTACATGACCAAAACACCGACCTGTAATTTTTTTGACAGAGGTAACTATCATTGGNTTTTCCA                  ]
[-] EMBL CB664545             [                                       ACAACAGTTTCAGCAGTTTGCAGCTTATGCAACACGCGCGAATCCAATCTACGGAGCCTCCTTCCTAGTTTTCACAGTTGTCTTGGTGGGAGTGGTCTGTGCTTGTTGCAAGTTTGCAAGAAGGCGTGGTAGTGGAGTCCCATATCAGCAACTTGAGATGGGAGACCAAGCCCCCAACTTATCAGGGGTGGAAAACACTACAAGCACTGTGTGATGGTTGGGAAGATGGCTGGGATGATGACTGGGATGATGAAGAAGCGGCAGCAAAACCTTCAGATAAGAAACCATCTGGAAGTATCTGTGCAAATGGCCTTTCTTTGAGACCTCAGACCAATAGCAAAGATGGGTGGGATGTAGATTGGGATGACTAAGATGCATAGAATGTTGAGAAATGTGATCTGGACGAGCTGCAGAAAAAGCACAGACAAAGTGATAGCATTTGTGATTGACAAGGTCACTCGCATTTTGGAAGATAGGTTTGTCTGTCTTCATACGGTTTGTACCATATTGTTCCATTACTACTTTTTGTTTTTAGGATGATACACAAACTGTTAGTGGGTACAAATTGTAATTTCGGTAGTAACACAACAGCAC GGTTTTTTAGTTACATGACCAAAACA CGAACTGTAATTTTTTTGACAGAGGTAAGTATCATTG  TTTTCCATTCGTAAAAAAATCAGAT]
[+] EMBL CA998794             [                                                                                                                                                                                                                      AACTCATCAGGCGTGGAAAACACTACAAGCACTGTG GATGGTTGGGAAGATGGCTGGGATGATGACTGGGATGATGAAGAAGCGGCAGCAAAACCTTCAGATAAGAAAGCATCTGGAAGTATCTCTGCAAATGGCCTTTCTTTGAGACCTCAGACCAATAGCAAAGATGGCTGGGATGTAGATTGGGATGACTAAGCTGCATAGAATGTTGAGAAATGTGATCTGGACGAGCTGCAGAAAAAGCACAGACAAACTGATAGCATCTGTGATTGACAAGGTCACTCGCATTCTGGAAGATAGGTTTGTCTGTCTTCATACGGTTTGTACCATATTGTTCCACTACTACTTTTTGTTTCTAGGCTGATACACAAAC                                                                                                                                         ]




>consensus_4949#0
GTGTTCCTTACACACCAAGGAAACAGTTTTTGATTGGCAACAACAGTTTCAGCAGTTTGC
AGCTTATGCAACACACGCGAATCCAATCTACGGAGCCTCCTTCCTTGTTTTCACTGTTGT
CTTGGTGGGAGTGGTCTGTGCTTGTTGCAAGTTTGCAAGAAGGCGTGCTAGTGGAGTCCC
ATATCAGCAACTTGAGATGGGAGCCCAAGCCCCCAACTCATCAGGCGTGGAAAACACTAC
AAGCACTGTGGATGGTTGGGAAGATGGCTGGGATGATGACTGGGATGATGAAGAAGCGGC
AGCAAAACCTTCAGATAAGAAACCATCTGGAAGTATCTCTGCAAATGGCCTTTCTTTGAG
ACCTCAGACCAATAGCAAAGATGGCTGGGATGTAGATTGGGATGACTAAGCTGCATAGAA
TGTTGAGAAATGTGATCTGGACGAGCTGCAGAAAAAGCACAGACAAACTGATAGCATCTG
TGATTGACAAGGTCACTCGCATTCTGGAAGATAGGTTTGTCTGTCTTCATACGGTTTGTA
CCATATTGTTCCACTACTACTTTTTGTTTCTAGGCTGATACACAAACTGTTAGTGGGTAC
AAATTGTAATTTCGGTAGTAACACAACAGCACGGGTTTCTTAGTTACATGACCAAAACAC
CGACCTGTAATTTTTTTGACAGAGGTAACTATCATTGGNTTTTCCATTCGTAAAAAAATC
AGAT

clustalw multiple alignements is not computed in this case