cluster # 4950

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Oryza sativa
cluster # 4950 cluster # 4950 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4950#0 length = 1335 sequences # 3
consensusID : consensus_4950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1335
fasta sequence
                              [CAGCGAGCGACGGGGAGAGATCGAGCCGAGCACCGGCGAGGAGGGATCGGCGATGATGGACGGCGGGAGGCGGTGGCAGTCGCCCGCCGCGGCGGCGGCGGCGGAGGGGGAGGACGCGGCGGGCGGCTACGGCGTCGGCGGCGCGGGGGGGCCCTCGAGGCGGCCTCCCCGTCGCGGGCTGAACCGCGCGTCGCCCTACGGGACGGCCGCCCCCCGCCGGTTGCTCCCCACGCTGCCCGTGGCCTCCAGGATCTTCCCCTCCGTGGCCCAAGACCACGCCGCCGCCGCCGCCGCCGCCTCCGACGATAATCAAATGGCCTGGCGTGAATCGCTGGAAGTAACCAATGAAACACATAGGCATTCTATAGAATGGAACACCAATTCTACAGCCCTGGATAATAAAGCCAGCCTGCTCCAGGAAGGTGATTGTAGAAATCAAAACGATGGCAGCGGTCTCGCTGAAATTGAGAATATCATCAAACAGAAACATTTTTCTAGGGATGAAACAGAACGCCTTATAGAGATTATGCGCTCAAGGACTCCTGATCATTTTAATGAATATCAGAGAGTTCCAAGGTCTTCCACTAAAGGTTTCGAAGCCATTCCGTTTTCAGACAGATGGTCCACTCCTGCAAAAGAGATTGATGTTCGATCACCTTGTGGGACTGAAGTCTTTGTACCATCAAATGTGCTTGATGTTGCCTCATCACCAATTGAACTTGCAAAAGCCTATATGGAAGCACAGACCTCAGCATCTGTACAAGAGTCTCAAAAGAGGAAATTCAGAGCTTTGAGTCATGGAGTTGAGGTAGAGAATTCATCCTCAAAGGTTTTCCCTAAAATAGCTACAGATTCTCCTGTATGCTGGCCAGGATCTGTTGTCCGAAACTATCCGAATTATCTTACACCACAGAGCAATAAAGGAAGAACTCTGCCTCCAACTTCCTCTCGCACAACTTATATTGGCTCAGTTTTCCCAAGATCTAACAAGTACACAGGATCCCGTGATGCCTATAATAACTCATCTGGAAAGCCACAATTTTCATCTCCTTTCCCTGTTGGAAGTAAGGCAATATTTGAGGATAAAACAGCACCTCTTGGTGCTGTTCTTGGGGCGCAACCGTCAACAACATATTCCAAAGAAGCATATGGAGATACTGTTGGTGCAACTACTCCCTTATTTGCAAAGAAATGTTCTGCTTCTAAGAAGAATGATGGATCCGCCCTTCAAGGACATCATGGCGAAGGCACCACTGAAAGTGGTTCATCGCTCGGGTTTGTTTCAATGGTAGACAATATGCCCCATTCCAAATCTGCGGCTTTATCTGTTCATCC]

[+] EMBL AK068134             [CAGCGAGCGACGGGGAGAGATCGAGCCGAGCACCGGCGAGGAGGGATCGGCGATGATGGACGGCGGGAGGCGGTGGCAGTCGCCCGCCGCGGCGGCGGCGGCGGAGGGGGAGGACGCGGCGGGCGGCTACGGCGTCGGCGGCGCGGGGGGGCCCTCGAGGCGGCCTCCCCGTCGCGGGCTGAACCGCGCGTCGCCCTACGGGACGGCCGCCCCCCGCCGGTTGCTCCCCACGCTGCCCGTGGCCTCCAGGATCTTCCCCTCCGTGGCCCAAGACCACGCCGCCGCCGCCGCCGCCGCCTCCGACGATAATCAAATGGCCTGGCGTGAATCGCTGGAAGTAACCAATGAAACACATAGGCATTCTATAGAATGGAACACCAATTCTACAGCCCTGGATAATAAAGCCAGCCTGCTCCAGGAAGGTGATTGTAGAAATCAAAACGATGGCAGCGGTCTCGCTGAAATTGAGAATATCATCAAACAGAAACATTTTTCTAGGGATGAAACAGAACGCCTTATAGAGATTATGCGCTCAAGGACTCCTGATCATTTTAATGAATATCAGAGAGTTCCAAGGTCTTCCACTAAAGGTTTCGAAGCCATTCCGTTTTCAGACAGATGGTCCACTCCTGCAAAAGAGATTGATGTTCGATCACCTTGTGGGACTGAAGTCTTTGTACCATCAAATGTGCTTGATGTTGCCTCATCACCAATTGAACTTGCAAAAGCCTATATGGAAGCACAGACCTCAGCATCTGTACAAGAGTCTCAAAAGAGGAAATTCAGAGCTTTGAGTCATGGAGTTGAGGTAGAGAATTCATCCTCAAAGGTTTTCCCTAAAATAGCTACAGATTCTCCTGTATGCTGGCCAGGATCTGTTGTCCGAAACTATCCGAATTATCTTACACCACAGAGCAATAAAGGAAGAACTCTGCCTCCAACTTCCTCTCGCACAACTTATATTGGCTCAGTTTTCCCAAGATCTAACAAGTACACAGGATCCCGTGATGCCTATAATAACTCATCTGGAAAGCCACAATTTTCATCTCCTTTCCCTGTTGGAAGTAAGGCAATATTTGAGGATAAAACAGCACCTCTTGGTGCTGTTCTTGGGGCGCAACCGTCAACAACATATTCCAAAGAAGCATATGGAGATACTGTTGGTGCAACTACTCCCTTATTTGCAAAGAAATGTTCTGCTTCTAAGAAGAATGATGGATCCGCCCTTCAAGGACATCATGGCGAAGGCACCACTGAAAGTGGTTCATCGCTCGGGTTTGTTTCAATGGTAGACAATATGCCCCATTCCAAATCTGCGGCTTTATCTGTTCATCC]
[+] EMBL CF306470             [                                                                                                                                                                                                                                                                                                                                                                                         CCAATTCTACAGCCCTGGATAATAAAGCCAGCCTGCTCCAGGAAGGTGATTGTAGAAATCAAAACGATGGCAGCGGTCTCGCTGAAATTGAGAATATCATCAAACAGAAACATTTTTCTAGGGATGAAACAGAACGCCTTATAGAGATTATGCGCTCAAGGACTCCTGATCATTTTAATGAATATCAGAGAGTTCCAAGGTCTTCCACTAAAGGTTTCGAAGCCATTCCGTTTTCAGACAGATGGTCCACTCCTGCAAAAGAGATTGATGTTCGATCACCTTGTGGGACTGAAGTCTTTGTACCATCAAATGTGCTTGATGTTGCCTCATCACCAATTGAACTTGCAAAAGCCTATATGGAAGCACAGACCTCAGCATCTGTACAAGAGTCTCAAAAGAGGAAATTCAGAGCTTTGAGTCATGGAGTTGAGGTAGAGAATTCATCCTCAAAGGTTTTCCCTAAAATAGCTACAGATTCTCCTGTATGCTGGCCAGGATCTGTTGTCCGAAACTATCCGAATTATCTTACACCACAGAGCAATAAAGGAAGAACTCTGCCTTCAACTTCCTCTCGCACAACT                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF307364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aggGCCTTATAGAGATTATGCGCTCAAGGACTCCTGATCATTTTAATGAATATCAGAGAGTTCCAAGGTCTTCCACTAAAGGTTTCGAAGCCATTCCGTTTTCAGACAGATGGTCCACTCCTGCAAAAGAGATTG TNGTCGTTCACCTTGTGGGACTGAAGTCTTTGTACCATCAAATGTTCTTGATGTTGCCTCATCACCAATTGAACTTGCAAAAGCCTATATGGAAGCACAGACCTCAGCATCTGTACAAGAGTCTCAAAAGAGGAAATTCAGAGCTTTGAGTCATGGAGTTGAGGTAGAGAATTCATCCTCAAAGGTTTTCCCTAAAATAGCTACAGATTCTCCTGTATGCTGGCCAGGATCTGTTGTCCGAAACTATCCGAATTATCTTACACCACAGAGCAATAAAGGAAGAACTCTGCCTCCAACTTCCTCTCGCACAACTTATATTGGCTCAGTTTTCCCAAGATCTAACAAGTACACAGGATCCCGTGATGCCTATAATAACTCATCTGGAAAGCCACAATTTTCATCTCCTTTCCCTGTTGGAAGTAAGGC                                                                                                                                                                                                                                                                        ]




>consensus_4950#0
CAGCGAGCGACGGGGAGAGATCGAGCCGAGCACCGGCGAGGAGGGATCGGCGATGATGGA
CGGCGGGAGGCGGTGGCAGTCGCCCGCCGCGGCGGCGGCGGCGGAGGGGGAGGACGCGGC
GGGCGGCTACGGCGTCGGCGGCGCGGGGGGGCCCTCGAGGCGGCCTCCCCGTCGCGGGCT
GAACCGCGCGTCGCCCTACGGGACGGCCGCCCCCCGCCGGTTGCTCCCCACGCTGCCCGT
GGCCTCCAGGATCTTCCCCTCCGTGGCCCAAGACCACGCCGCCGCCGCCGCCGCCGCCTC
CGACGATAATCAAATGGCCTGGCGTGAATCGCTGGAAGTAACCAATGAAACACATAGGCA
TTCTATAGAATGGAACACCAATTCTACAGCCCTGGATAATAAAGCCAGCCTGCTCCAGGA
AGGTGATTGTAGAAATCAAAACGATGGCAGCGGTCTCGCTGAAATTGAGAATATCATCAA
ACAGAAACATTTTTCTAGGGATGAAACAGAACGCCTTATAGAGATTATGCGCTCAAGGAC
TCCTGATCATTTTAATGAATATCAGAGAGTTCCAAGGTCTTCCACTAAAGGTTTCGAAGC
CATTCCGTTTTCAGACAGATGGTCCACTCCTGCAAAAGAGATTGATGTTCGATCACCTTG
TGGGACTGAAGTCTTTGTACCATCAAATGTGCTTGATGTTGCCTCATCACCAATTGAACT
TGCAAAAGCCTATATGGAAGCACAGACCTCAGCATCTGTACAAGAGTCTCAAAAGAGGAA
ATTCAGAGCTTTGAGTCATGGAGTTGAGGTAGAGAATTCATCCTCAAAGGTTTTCCCTAA
AATAGCTACAGATTCTCCTGTATGCTGGCCAGGATCTGTTGTCCGAAACTATCCGAATTA
TCTTACACCACAGAGCAATAAAGGAAGAACTCTGCCTCCAACTTCCTCTCGCACAACTTA
TATTGGCTCAGTTTTCCCAAGATCTAACAAGTACACAGGATCCCGTGATGCCTATAATAA
CTCATCTGGAAAGCCACAATTTTCATCTCCTTTCCCTGTTGGAAGTAAGGCAATATTTGA
GGATAAAACAGCACCTCTTGGTGCTGTTCTTGGGGCGCAACCGTCAACAACATATTCCAA
AGAAGCATATGGAGATACTGTTGGTGCAACTACTCCCTTATTTGCAAAGAAATGTTCTGC
TTCTAAGAAGAATGATGGATCCGCCCTTCAAGGACATCATGGCGAAGGCACCACTGAAAG
TGGTTCATCGCTCGGGTTTGTTTCAATGGTAGACAATATGCCCCATTCCAAATCTGCGGC
TTTATCTGTTCATCC
clustalw multiple alignements is not computed in this case