cluster # 4953

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4953 cluster # 4953 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4953#0 length = 1604 sequences # 3
consensusID : consensus_4953#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1604
fasta sequence
                              [TAACCTCCTCCTCCTCCTCGAGCTCCGAATCCCAAAACCCTAGCCCCACCCGCCGCCGCACGCCGGAGGAGGAGGAGATGGCTGACAAGGAGAACTCCACCCCGGCCTCCGCGGCGCGGCTCACCCGCTCGTCTGCGGCGGCTGGGGCGCAGGCCAAGCGTTCGGCCGCCGCGGGCGTCGCCGACGGTGGCGCGCCGCCGGCGAAGAGGAAGCGCGTCGCGCTCAGCGACCTCCCGACCCTNTCCAACGCCGTCGTCGTCGCCCCCCGCCAGCCGCACCACCCCGTCGTCATCAAGCCGTCGTCCAAGCAGCCCGAGCCCGCCGCGGAGGCGGCGGCGCCCANCGGCGGCGGCGGCGGCTTCCCCGTGTCATTCCGCGTTCGACGTCGACGGNGTCGCCCTTCTTCGGGTTGGGACCCGCAGTACGCCTCCGACATCTACACCTACCTCCGATCCATGGAGGTGGAGGCGCGGAGGCAGTCGGCGGCGGACTACATCGAGGCGGTGCAGGTGGACGTGACGGCGAACATGCGGGCCATCCTCGTGGACTGGCTGGTGGAGGTCGCCGACGAGTACAAGCTCGTCGCCGACACGCTCTACCTCGCCGTCTCCTACCTCGACCGCTACCTCTCCGCCCACCCGCTCAGGCGCAACAGGCTGCAGCTCCTCGGCGTCGGCGCCATGCTCATCGCTGCGAAGTACGAGGAGATTAGCCCTCCTCATGTGGAGGATTTCTGCTACATCACTGATAATACGTACACTAGGCAGGAGGTTGTCAAGATGGAGAGCGACATACTCAAGCTTCTCGAGTTCGAGATGGGCAATCCTACCATCAAGACATTCCTCAGGCGGTTCACGAGATCTTGCCAGGAAGACAAAAAGCGCTCCAGCTTGTTATTGGAGTTCATGGGGAGTTATCTTGCTGAGCTTAGTCTACTTGACTACGGCTGTCTCCGGTTCTTGCCATCGGTGGTTGCTGCCTCAGTGGTGTTTGTTGCTAAACTGAACATTGATCCGTACACCAATCCTTGGAGCAAGAAGATGCAGAAGTTGACAGGATACAAGGTGTCTGAACTGAAGGATTGCATCTTGGCCATTCATGACTTGCAGCTCAGAAAAAAATGTTCAAACTTAACTGCAATTCGCGACAAGTACAAGCAACACAAGTTCAAGTGTGTCTCAACATTGCTTCCCCCTTTGATATCCCTGCGTCATACCTCCAAGATTTAACAGAGTAGCTGTTTTTGGTCTGCAACTTTGCGATGTTAACAGTCTGAGCTTGTCTCGAGCTCCCGGAGATAAAGGAAGAATTACAGTTGCAGGGCAGCTTCTCAGCTAAGTTAGAGTGCTCTAAGCATTTAGATGCTGAATGGTTTTAAAGCCTGAGCCTTAGGGGGAGATTTCAGAGTCTATTTAGGAGCCACTGAATCGCTAGCAGGCTAACAGGCATTCTCCTGTTTT-TGTAAAATTGTAGTTCTGTATTATAACTTACAACATGGTGTCTTGGTTTGTTGGGAGAAAAACTTGTAATGTTTGATATGCTGGTCCATTCCCTTTGTTAATCTTTTTTTATGAAATTGTCGGTTACAGTCTCAGTACCTTCTT]

[+] EMBL AU166317             [TAACCTCCTCCTCCTCCTCGAGCTCCGAATCCCAAAACCCTAGCCCCACCCGCCGCCGCACGCCGGAGGAGGAGGAGATGGCTGACAAGGAGAACTCCACCCCGGCCTCCGCGGCGCGGCTCACCCGCTCGTCTGCGGCGGCTGGGGCGCAGGCCAAGCGTTCGGCCGCCGCGGGCGTCGCCGACGGTGGCGCGCCGCCGGCGAAGAGGAAGCGCGTCGCGCTCAGCGACCTCCCGACCCTNTCCAACGCCGTCGTCGTCGCCCCCCGCCAGCCGCACCACCCCGTCGTCATCAAGCCGTCGTCCAAGCAGCCCGAGCCCGCCGCGGAGGCGGCGGCGCCCANCGGCGGCGGCGGCGGCTTCCCCGTGTCATTCCGCGTTCGACGTCGACGGNGTCGCCCTTCTTCGGGTTGGGACCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK110937             [                                         AGCCCCACCCGCCGCCGCACGCCGGAGGAGGAGGAGATGGCTGACAAGGAGAACTCCACCCCGGCCTCCGCGGCGCGGCTCACCCGCTCGTCTGCGGCGGCTGGGGCGCAGGCCAAGCGTTCGGCCGCCGCGGGCGTCGCCGACGGTGGCGCGCCGCCGGCGAAGAGGAAGCGCGTCGCGCTCAGCGACCTCCCGACCCTCTCCAACGCCGTCGTCGTCGCCCCCCGCCAGCCGCACCACCCCGTCGTCATCAAGCCGTCGTCCAAGCAGCCCGAGCCCGCCGCGGAGGCGGCGGCGCCCAGCGGCGGCGGCGGCGGCTCCCCCGTGTCA TCCGCG TCGACGTCGACGGCGTCGCCC TCCTCCGGTTGGGACCCGCAGTACGCCTCCGACATCTACACCTACCTCCGATCCATGGAGGTGGAGGCGCGGAGGCAGTCGGCGGCGGACTACATCGAGGCGGTGCAGGTGGACGTGACGGCGAACATGCGGGCCATCCTCGTGGACTGGCTGGTGGAGGTCGCCGACGAGTACAAGCTCGTCGCCGACACGCTCTACCTCGCCGTCTCCTACCTCGACCGCTACCTCTCCGCCCACCCGCTCAGGCGCAACAGGCTGCAGCTCCTCGGCGTCGGCGCCATGCTCATCGCTGCGAAGTACGAGGAGATTAGCCCTCCTCATGTGGAGGATTTCTGCTACATCACTGATAATACGTACACTAGGCAGGAGGTTGTCAAGATGGAGAGCGACATACTCAAGCTTCTCGAGTTCGAGATGGGCAATCCTACCATCAAGACATTCCTCAGGCGGTTCACGAGATCTTGCCAGGAAGACAAAAAGCGCTCCAGCTTGTTATTGGAGTTCATGGGGAGTTATCTTGCTGAGCTTAGTCTACTTGACTACGGCTGTCTCCGGTTCTTGCCATCGGTGGTTGCTGCCTCAGTGGTGTTTGTTGCTAAACTGAACATTGATCCGTACACCAATCCTTGGAGCAAGAAGATGCAGAAGTTGACAGGATACAAGGTGTCTGAACTGAAGGATTGCATCTTGGCCATTCATGACTTGCAGCTCAGAAAAAAATGTTCAAACTTAACTGCAATTCGCGACAAGTACAAGCAACACAAGTTCAAGTGTGTCTCAACATTGCTTCCCCCTTTGATATCCCTGCGTCATACCTCCAAGATTTAACAGAGTAGCTGTTTTTGGTCTGCAACTTTGCGATGTTAACAGTCTGAGCTTGTCTCGAGCTCCCGGAGATAAAGGAAGAATTACAGTTGCAGGGCAGCTTCTCAGCTAAGTTAGAGTGCTCTAAGCATTTAGATGCTGAATGGTTTTAAAGCCTGAGCCTTAGGGGGAGATTTCAGAGTCTATTTAGGAGCCACTGAATCGCTAGCAGGCTAACAGGCATTCTCCTGTTTT TGTAAAATTGTAGTTCTGTATTATAACTTACAACATGGTGTCTTGGTTTGTTGGGAGAAAAACTTGTAATGTTTGATATGCTGGTCCATTCCCTTTGTTAATCTTTTTTTATGAAATTGTCGGTTACAGTCTCAGTACCTTCTT]
[-] EMBL AU225513             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgctCTGAATCGCTAGCAGGCTAACAGGCATTCTCCTGTTTTATGTAAAATTGTAGTTCTGTATTATAACTTACAACATGGTGTCTTGGTTTGTTGGGAGAAAAACTTGTAATGTTTGATATGCTGGTCCATTCCCTTTGTTAATCTTTTTTTATGAAATTGTCGagcggc                ]




>consensus_4953#0
TAACCTCCTCCTCCTCCTCGAGCTCCGAATCCCAAAACCCTAGCCCCACCCGCCGCCGCA
CGCCGGAGGAGGAGGAGATGGCTGACAAGGAGAACTCCACCCCGGCCTCCGCGGCGCGGC
TCACCCGCTCGTCTGCGGCGGCTGGGGCGCAGGCCAAGCGTTCGGCCGCCGCGGGCGTCG
CCGACGGTGGCGCGCCGCCGGCGAAGAGGAAGCGCGTCGCGCTCAGCGACCTCCCGACCC
TNTCCAACGCCGTCGTCGTCGCCCCCCGCCAGCCGCACCACCCCGTCGTCATCAAGCCGT
CGTCCAAGCAGCCCGAGCCCGCCGCGGAGGCGGCGGCGCCCANCGGCGGCGGCGGCGGCT
TCCCCGTGTCATTCCGCGTTCGACGTCGACGGNGTCGCCCTTCTTCGGGTTGGGACCCGC
AGTACGCCTCCGACATCTACACCTACCTCCGATCCATGGAGGTGGAGGCGCGGAGGCAGT
CGGCGGCGGACTACATCGAGGCGGTGCAGGTGGACGTGACGGCGAACATGCGGGCCATCC
TCGTGGACTGGCTGGTGGAGGTCGCCGACGAGTACAAGCTCGTCGCCGACACGCTCTACC
TCGCCGTCTCCTACCTCGACCGCTACCTCTCCGCCCACCCGCTCAGGCGCAACAGGCTGC
AGCTCCTCGGCGTCGGCGCCATGCTCATCGCTGCGAAGTACGAGGAGATTAGCCCTCCTC
ATGTGGAGGATTTCTGCTACATCACTGATAATACGTACACTAGGCAGGAGGTTGTCAAGA
TGGAGAGCGACATACTCAAGCTTCTCGAGTTCGAGATGGGCAATCCTACCATCAAGACAT
TCCTCAGGCGGTTCACGAGATCTTGCCAGGAAGACAAAAAGCGCTCCAGCTTGTTATTGG
AGTTCATGGGGAGTTATCTTGCTGAGCTTAGTCTACTTGACTACGGCTGTCTCCGGTTCT
TGCCATCGGTGGTTGCTGCCTCAGTGGTGTTTGTTGCTAAACTGAACATTGATCCGTACA
CCAATCCTTGGAGCAAGAAGATGCAGAAGTTGACAGGATACAAGGTGTCTGAACTGAAGG
ATTGCATCTTGGCCATTCATGACTTGCAGCTCAGAAAAAAATGTTCAAACTTAACTGCAA
TTCGCGACAAGTACAAGCAACACAAGTTCAAGTGTGTCTCAACATTGCTTCCCCCTTTGA
TATCCCTGCGTCATACCTCCAAGATTTAACAGAGTAGCTGTTTTTGGTCTGCAACTTTGC
GATGTTAACAGTCTGAGCTTGTCTCGAGCTCCCGGAGATAAAGGAAGAATTACAGTTGCA
GGGCAGCTTCTCAGCTAAGTTAGAGTGCTCTAAGCATTTAGATGCTGAATGGTTTTAAAG
CCTGAGCCTTAGGGGGAGATTTCAGAGTCTATTTAGGAGCCACTGAATCGCTAGCAGGCT
AACAGGCATTCTCCTGTTTTTGTAAAATTGTAGTTCTGTATTATAACTTACAACATGGTG
TCTTGGTTTGTTGGGAGAAAAACTTGTAATGTTTGATATGCTGGTCCATTCCCTTTGTTA
ATCTTTTTTTATGAAATTGTCGGTTACAGTCTCAGTACCTTCTT
clustalw multiple alignements is not computed in this case