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Oryza sativa
cluster # 4991 cluster # 4991       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4991#0 length = 1139 sequences # 3  

consensusID : consensus_4991#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1139
fasta sequence
                              [ATTCCACGTGGGAAGACTCGCCCGCCTCGCCTCGCCTCGCTCTCGCGCTTCGAATCCCCACGCGACGCGACGCGCCCAACCGCGCCCTCGCCTCGCCGCCATGGACGCCCCCGCGTTACCTCCTCCCCCTCGCCTGGTCGACTATATCTCCAGCCTCCAAGGCCTGGTGCGCCTGGGGGACCTCGCCGATCTCGAGCCGGACAAGTCCGTGGTAGTTGTTGTCTCCGGCTGTTACCCGCTCGAGGACGCACCTATACTGTTCGATGATTTGTCTGCGAGGGAGACCTGGTGCGTGATCGGGATGCCGGAGCTTTGTATCCTCCGGGCGCGTGCCATCAGTCTTTTGCAGCGGCGGGAAGATCTCAGAGCTCTCGTCCGGGACAT-GGGACAT-GACTT-GCTGGTCTGC-GGGACGGAGTCA-GGCAAGGTCGAGGGAGTTCTCGCGA-GGGCACTGAAGC-TTCCAGCAGGCATGGATGCACCGCCCGGGATCAGCCTCGATCTGGTGGGAGACGCTGACGAGGGACGGCGCTTCCTCCGCCGCGACATTGCCCGCGCGCGTCTGCAGCTCGCCGCGCTCGCGGGCCACACCGAGCGGCACATCCTGAGGCGGCTCGGGAGGGAGCTCGCACTGCGGGCGAGCACCGGAGTCGTGGCTCCGCAGGAGCTGTGGCCAGACATCCAGGAGCAGAGGCTTCGCCACGCGCCACCTGACTCCACATCTGATGCGGCGTTGTATGCAGAGGCTGCAGAGGAAGCTGCTTGGGTCGCTCCTGCGGGCACTCCTCCCGACTGCGATGCCTAGGCGACGCCGGTGACAGGACGGTGTCCGCCATCTCTGACTAAACTCCGGCCTTATAACCACTGCGAATTGAGTACATAAACGTTGCGTTCCTTACTTACATTGAGCTGCTTACATCGTTACTCTAGTTAGAAACAGGTAGCCTTTTTTGGTTCAGGTGCACATGACCCAAATGGTGAACTTGTGGATTTGAGCAATTTTTTGTTCACCAAATAGGTCATGTGGTCCTGATATGTTTCCGATGATGATCGATCAGCACTGAAGTTTGTTTTTTGTTCTTGCTATCCCTTTTTGAAAATGATTGAATATGTGCCTTGCCTGGCTTTTGAACTTTTGATAAAAA]

[+] EMBL AK064658             [ATTCCACGTGGGAAGACTCGCCCGCCTCGCCTCGCCTCGCTCTCGCGCTTCGAATCCCCACGCGACGCGACGCGCCCAACCGCGCCCTCGCCTCGCCGCCATGGACGCCCCCGCGTTACCTCCTCCCCCTCGCCTGGTCGACTATATCTCCAGCCTCCAAGGCCTGGTGCGCCTGGGGGACCTCGCCGATCTCGAGCCGGACAAGTCCGTGGTAGTTGTTGTCTCCGGCTGTTACCCGCTCGAGGACGCACCTATACTGTTCGATGATTTGTCTGCGAGGGAGACCTGGTGCGTGATCGGGATGCCGGAGCTTTGTATCCTCCGGGCGCGTGCCATCAGTCTTTTGCAGCGGCGGGAAGATCTCAGAGCTCTCGTCCGGGACAT GGGACAT GACTT GCTGGTCTGC GGGACGGAGTCA GGCAAGGTCGAGGGAGTTCTCGCGA GGGCACTGAAGC TTCCAGCAGGCATGGATGCACCGCCCGGGATCAGCCTCGATCTGGTGGGAGACGCTGACGAGGGACGGCGCTTCCTCCGCCGCGACATTGCCCGCGCGCGTCTGCAGCTCGCCGCGCTCGCGGGCCACACCGAGCGGCACATCCTGAGGCGGCTCGGGAGGGAGCTCGCACTGCGGGCGAGCACCGGAGTCGTGGCTCCGCAGGAGCTGTGGCCAGACATCCAGGAGCAGAGGCTTCGCCACGCGCCACCTGACTCCACATCTGATGCGGCGTTGTATGCAGAGGCTGCAGAGGAAGCTGCTTGGGTCGCTCCTGCGGGCACTCCTCCCGACTGCGATGCCTAGGCGACGCCGGTGACAGGACGGTGTCCGCCATCTCTGACTAAACTCCGGCCTTATAACCACTGCGAATTGAGTACATAAACGTTGCGTTCCTTACTTACATTGAGCTGCTTACATCGTTACTCTAGTTAGAAACAGGTAGCCTTTTTTGGTTCAGGTGCACATGACCCAAATGGTGAACTTGTGGATTTGAGCAATTTTTTGTTCACCAAATAGGTCATGTGGTCCTGATATGTTTCCGATGATGATCGATCAGCACTGAAGTTTGTTTTTTGTTCTTGCTATCCCTTTTTGAAAATGATTGAATATGTGCCTTGCCTGG                     ]
[+] EMBL C73146               [          GGAAGACTCGCCCGCCTCGCCTCGCCTCGCTCTCGCGCTTCGAATCCCCACGCGACG GACG GCCCAACCGCGCCCTCGCCTCGCCGCCATGGACGCCCCCGCGTTACCTCCTCCCCCTCGCCTGGTCGACTATATCTCCAGCCTCCAAGGCCTGGTGCGCCTGGGGGACCTCGCCGATCTCGAGCCGGACAAGTCCGTGGTAGTTGTTGTCTCCGGCTGTTACCCGCTCGAGGACGCACCTATACTGTTCGATGATTTGTCTGCGAGGGAGACCTGGTGCGTGATCGGGATGCCGGAGCTTTGTATCCTCCGGGCGCGTGCCATCAGTCTTTTGCAGCGGCGGGAAGATCTCAGAGCTCTCGTCCGGGACATGGGGACATGGACTTGGCTGGTCTGCGGGGACGGA TCAGGGCAAGGTCGAGGGA TTCTCGCGAGGGGCATTGAAGCTTTCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU075413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aaATTGAGCTGCTNACATCGTTACTCTAGTTAGAAACAGGTAGCCTTTTTTGGTTCAGGTGCACATGACCCAAATGGTGAACTTGTGGATTTGAGCAATTTTTTGTTCACNAAATAGGTCATGTGGTCCTGATATGTTTCCGATGATGATCGATCAGCACTGAAGTTTGTTTTTTGTTCTTGCTATCCCTTTTTGAAAATGATTGAATATGTGCCTTGCCTGCCTTTTGAACTTTTGATAAAAA]


>consensus_4991#0 ATTCCACGTGGGAAGACTCGCCCGCCTCGCCTCGCCTCGCTCTCGCGCTTCGAATCCCCA CGCGACGCGACGCGCCCAACCGCGCCCTCGCCTCGCCGCCATGGACGCCCCCGCGTTACC TCCTCCCCCTCGCCTGGTCGACTATATCTCCAGCCTCCAAGGCCTGGTGCGCCTGGGGGA CCTCGCCGATCTCGAGCCGGACAAGTCCGTGGTAGTTGTTGTCTCCGGCTGTTACCCGCT CGAGGACGCACCTATACTGTTCGATGATTTGTCTGCGAGGGAGACCTGGTGCGTGATCGG GATGCCGGAGCTTTGTATCCTCCGGGCGCGTGCCATCAGTCTTTTGCAGCGGCGGGAAGA TCTCAGAGCTCTCGTCCGGGACATGGGACATGACTTGCTGGTCTGCGGGACGGAGTCAGG CAAGGTCGAGGGAGTTCTCGCGAGGGCACTGAAGCTTCCAGCAGGCATGGATGCACCGCC CGGGATCAGCCTCGATCTGGTGGGAGACGCTGACGAGGGACGGCGCTTCCTCCGCCGCGA CATTGCCCGCGCGCGTCTGCAGCTCGCCGCGCTCGCGGGCCACACCGAGCGGCACATCCT GAGGCGGCTCGGGAGGGAGCTCGCACTGCGGGCGAGCACCGGAGTCGTGGCTCCGCAGGA GCTGTGGCCAGACATCCAGGAGCAGAGGCTTCGCCACGCGCCACCTGACTCCACATCTGA TGCGGCGTTGTATGCAGAGGCTGCAGAGGAAGCTGCTTGGGTCGCTCCTGCGGGCACTCC TCCCGACTGCGATGCCTAGGCGACGCCGGTGACAGGACGGTGTCCGCCATCTCTGACTAA ACTCCGGCCTTATAACCACTGCGAATTGAGTACATAAACGTTGCGTTCCTTACTTACATT GAGCTGCTTACATCGTTACTCTAGTTAGAAACAGGTAGCCTTTTTTGGTTCAGGTGCACA TGACCCAAATGGTGAACTTGTGGATTTGAGCAATTTTTTGTTCACCAAATAGGTCATGTG GTCCTGATATGTTTCCGATGATGATCGATCAGCACTGAAGTTTGTTTTTTGTTCTTGCTA TCCCTTTTTGAAAATGATTGAATATGTGCCTTGCCTGGCTTTTGAACTTTTGATAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)