cluster # 500

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Oryza sativa
cluster # 500 cluster # 500 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_500#0 length = 1433 sequences # 2
consensusID : consensus_500#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1433
fasta sequence
                              [TCCGGAGCGAGCGCTGCTCGGATCGGATTGGGTCCGTGGAGGCGAGCGCACAATTTCTCGTTTGAGCAAGCATGGTTAGCACAATAAAGGTCCACAATGTCTCACTTGAAGCATCAGAACAAGATATCAGGGAGTTCTTTTCCTTTTCCGGTGTCATCGTACATGTTGAAATGCAAAGTGGTGACGAGCGGTCTCAGTTTGCCTACATCACCTTCGAAGATGACGAAGGAGCAGAGAGGGCTATGCTTCTCACGGGTGCGACTATAGTGGATATGTCTGTCATCATAACACCGGCCACTAATTATCAGCTGCCGGCAGCCGTTTTAGCTGATATTGAGTCTAAGAACGCTGGTGGCATGGAATCTGCACTTCGGAAGGCGGAGGATGCTGTTGTTTCCATGTTGGCCAAAGGATTTGTCCTTGGGAAGGATGCCCTTGAAAGGGCCAAGTCTTTTGATGAAAAGCATCAGCTCACATCCACCGCAACTGCGAAAGTTACCTCGCTTGATAGGAAGATGGGTCTAAGCCAGAAGTTCAGCACTGGTACCTTAGTGGTAAATGAGAAGATGAAAGAAATGGATCAGAAATACCAGGTTGCAGAGAAGACCAAATCAGCATTAGCAGCTGCAGAACAGACAGTCTCTACTGCTGGCTCTGCAATCATGAGTAACAGATACATCCTTACAGGGGCAGCATGGGTAACCGATGCCTATAGCAAGGTTGCAACCACTGCAACTGATGCTGGAGCAAAATCAAAGGAAATGGTGGTGGCTGAGCAGGATGACAAGCATCAAGATGATAAACCGGCAAAGGACTATTCTCCTATAAGCTCTAAAGAGTTTGTACAAGAGGG-CAAGCATCAGG-AAGGTGAACGACCAAAGAAGAACATGCCAGAAAAACCTGAAATGGGTAAACGGGAGCTGGAAAATCAGGAGGCCGCAATCCCAACAGCCCATGCGCAAGAAAATGCCCAAATAACCGGGAAGGAGCATAAGCATCAGGAGGCTGATTTACCTAAGGCCGATATACCTGGAAGTTTCACGATGGCCGCGAAAAGTGAAAAGCACAGGAACCCGTACAGCGAATTGTCGAAAACCCATATCCCAGGAAGCCCTGCAACGATTCCTGTCTGCACGGCCACTACTGATGTGAACAGTACCAAAACTCCAAAGAAGCCAGAGAATGCCGAGGGATTCATCTGATGATGTGTTCGATTCAAAGAATGTAAATATGGATGTGGGATGCCGGTGATGTTTTTGATTCAGCTTATAATGTGGAACTTGCCATCTTTCAGATATCGTTCACAATTGTTTCCAGATTTTAAGATTGTAATGATCACCTTTTCGTTACTGTTTTTGTGCAGTTTTGGTCCACATTTGTATTCTAGGTCCCTTTTTTATGCACTACTTTTTTATATGTGAAAAAAAAAAAAA]

[+] EMBL AK070522             [TCCGGAGCGAGCGCTGCTCGGATCGGATTGGGTCCGTGGAGGCGAGCGCACAATTTCTCGTTTGAGCAAGCATGGTTAGCACAATAAAGGTCCACAATGTCTCACTTGAAGCATCAGAACAAGATATCAGGGAGTTCTTTTCCTTTTCCGGTGTCATCGTACATGTTGAAATGCAAAGTGGTGACGAGCGGTCTCAGTTTGCCTACATCACCTTCGAAGATGACGAAGGAGCAGAGAGGGCTATGCTTCTCACGGGTGCGACTATAGTGGATATGTCTGTCATCATAACACCGGCCACTAATTATCAGCTGCCGGCAGCCGTTTTAGCTGATATTGAGTCTAAGAACGCTGGTGGCATGGAATCTGCACTTCGGAAGGCGGAGGATGCTGTTGTTTCCATGTTGGCCAAAGGATTTGTCCTTGGGAAGGATGCCCTTGAAAGGGCCAAGTCTTTTGATGAAAAGCATCAGCTCACATCCACCGCAACTGCGAAAGTTACCTCGCTTGATAGGAAGATGGGTCTAAGCCAGAAGTTCAGCACTGGTACCTTAGTGGTAAATGAGAAGATGAAAGAAATGGATCAGAAATACCAGGTTGCAGAGAAGACCAAATCAGCATTAGCAGCTGCAGAACAGACAGTCTCTACTGCTGGCTCTGCAATCATGAGTAACAGATACATCCTTACAGGGGCAGCATGGGTAACCGATGCCTATAGCAAGGTTGCAACCACTGCAACTGATGCTGGAGCAAAATCAAAGGAAATGGTGGTGGCTGAGCAGGATGACAAGCATCAAGATGATAAACCGGCAAAGGACTATTCTCCTATAAGCTCTAAAGAGTTTGTACAAGAGGG CAAGCATCAGG AAGGTGAACGACCAAAGAAGAACATGCCAGAAAAACCTGAAATGGGTAAACGGGAGCTGGAAAATCAGGAGGCCGCAATCCCAACAGCCCATGCGCAAGAAAATGCCCAAATAACCGGGAAGGAGCATAAGCATCAGGAGGCTGATTTACCTAAGGCCGATATACCTGGAAGTTTCACGATGGCCGCGAAAAGTGAAAAGCACAGGAACCCGTACAGCGAATTGTCGAAAACCCATATCCCAGGAAGCCCTGCAACGATTCCTGTCTGCACGGCCACTACTGATGTGAACAGTACCAAAACTCCAAAGAAGCCAGAGAATGCCGAGGGATTCATCTGATGATGTGTTCGATTCAAAGAATGTAAATATGGATGTGGGATGCCGGTGATGTTTTTGATTCAGCTTATAATGTGGAACTTGCCATCTTTCAGATATCGTTCACAATTGTTTCCAGATTTTAAGATTGTAATGATCACCTTTTCGTTACTGTTTTTGTGCAGTTTTGGTCCACATTTGTATTCTAGGTCCCTTTTTTATGCACTACTTT                       ]
[-] EMBL CA759695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gaAAATGGTGGTGGTTCAGCAGAATGCCAAGCATCGGGATGATAAACCGGCAAAGGTCTATTCTCCTATAAGCTTTAAAGAGTTTGTCCAAGAGGGCCAAGCATCAGGAAAGGTGAACGACCAAAAAAGAACATGCCAGAAAAACCTGAAATGGGTAAACGGGAGCTGGAAAATCAGGAGGCCGCAATCCCAACAGCCCATGCGCAAGAAAATGCCCAAATAACCGGGAAGGAGCATAAGCATCAGGAGGCTGATTTACCTAAGGCCGATATACCTGGAAGTTTCACGATGGCCGCGAAAAGTGAAAAGCACAGGAACCCGTACAGCGAATTGTCGAAAACCCATATCCCAGGAAGCCCTGCAACGATTCCTGTTTGCACGGCCCCTACTGATGTGAACAGTACCAAAACTCCAAAGAAGCCAGAGAATGCCGAGGGATTCATTTGATGATGTGTTCGATTCAAAGAATGTAAATATGGATGTGGGATGCCGGTGATGTTTTTGATTCAGCTTATAATGTGGAACTTGCCATCTTTCAGATATCGTTCACAATTGTTTCCAGATTTTAAGATTGTAATGATCACCCTTTCGTTACTGTTTTTGTGCAGTTTTGGTCCACATTTGTATTCTAGGTCCCTTTTTTATGCCCTACTTTTTTATATGTGAAAAAAAAAAAAA]




>consensus_500#0
TCCGGAGCGAGCGCTGCTCGGATCGGATTGGGTCCGTGGAGGCGAGCGCACAATTTCTCG
TTTGAGCAAGCATGGTTAGCACAATAAAGGTCCACAATGTCTCACTTGAAGCATCAGAAC
AAGATATCAGGGAGTTCTTTTCCTTTTCCGGTGTCATCGTACATGTTGAAATGCAAAGTG
GTGACGAGCGGTCTCAGTTTGCCTACATCACCTTCGAAGATGACGAAGGAGCAGAGAGGG
CTATGCTTCTCACGGGTGCGACTATAGTGGATATGTCTGTCATCATAACACCGGCCACTA
ATTATCAGCTGCCGGCAGCCGTTTTAGCTGATATTGAGTCTAAGAACGCTGGTGGCATGG
AATCTGCACTTCGGAAGGCGGAGGATGCTGTTGTTTCCATGTTGGCCAAAGGATTTGTCC
TTGGGAAGGATGCCCTTGAAAGGGCCAAGTCTTTTGATGAAAAGCATCAGCTCACATCCA
CCGCAACTGCGAAAGTTACCTCGCTTGATAGGAAGATGGGTCTAAGCCAGAAGTTCAGCA
CTGGTACCTTAGTGGTAAATGAGAAGATGAAAGAAATGGATCAGAAATACCAGGTTGCAG
AGAAGACCAAATCAGCATTAGCAGCTGCAGAACAGACAGTCTCTACTGCTGGCTCTGCAA
TCATGAGTAACAGATACATCCTTACAGGGGCAGCATGGGTAACCGATGCCTATAGCAAGG
TTGCAACCACTGCAACTGATGCTGGAGCAAAATCAAAGGAAATGGTGGTGGCTGAGCAGG
ATGACAAGCATCAAGATGATAAACCGGCAAAGGACTATTCTCCTATAAGCTCTAAAGAGT
TTGTACAAGAGGGCAAGCATCAGGAAGGTGAACGACCAAAGAAGAACATGCCAGAAAAAC
CTGAAATGGGTAAACGGGAGCTGGAAAATCAGGAGGCCGCAATCCCAACAGCCCATGCGC
AAGAAAATGCCCAAATAACCGGGAAGGAGCATAAGCATCAGGAGGCTGATTTACCTAAGG
CCGATATACCTGGAAGTTTCACGATGGCCGCGAAAAGTGAAAAGCACAGGAACCCGTACA
GCGAATTGTCGAAAACCCATATCCCAGGAAGCCCTGCAACGATTCCTGTCTGCACGGCCA
CTACTGATGTGAACAGTACCAAAACTCCAAAGAAGCCAGAGAATGCCGAGGGATTCATCT
GATGATGTGTTCGATTCAAAGAATGTAAATATGGATGTGGGATGCCGGTGATGTTTTTGA
TTCAGCTTATAATGTGGAACTTGCCATCTTTCAGATATCGTTCACAATTGTTTCCAGATT
TTAAGATTGTAATGATCACCTTTTCGTTACTGTTTTTGTGCAGTTTTGGTCCACATTTGT
ATTCTAGGTCCCTTTTTTATGCACTACTTTTTTATATGTGAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case