cluster # 5001

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Oryza sativa
cluster # 5001 cluster # 5001 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5001#0 length = 2400 sequences # 3
consensusID : consensus_5001#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2400
fasta sequence
                              [GAGGGGTTTTTTACTTTACCCATTGCCCTCCCACCTGCTCCCCCTCCTGCCCTCCCACCCTCTTGTGCGCATTCCGTCGAGCACGTCGCGGGCGCACCTCCCGCCGCTGCCTCGGCTTGCCCCACCGCGGATCGCAGAGCGAAGCATCCCCGCTAGGCTACTAAAGATGCCTCATCATGGTGGTAGGAAGAAGAAGAACAAGGGTGGGAAGGGGAAGCCTCGGAAGAAGACCGACGACCGCGGAGAGGCCAATGTCGGGTCGGGCGACAGCTCGCCCGCCGTCCGCGTCGAGGAGGAGGCGGAGGTGGAGGCGGAGGCGGAGGTGGGGACGGCGGTCGAGCCGCAGCGCTCGGGAACGTTGGCCTCGCCCACTGACGTCGTCGAGGCAGCCCAACACGGCCAGCGGCAGCAGCAGGCCTCCCAGTCCCAACAGACACCAAGCCCTCGAAGTTATGCAGCTGCAGTGGTGAACAAAAGAGAAGATGAAACAGTTGGCTACAACTTCCTTCAGTTCCTTCGAAGCTTCACAGTAGAGCACAGAGAAGGGCCTTTCTATGCTGGGGAACTAAAGAGTATGGTCTATCAGAACAGCAAAACTTTTTGTGTCTACTATGGGCACTTCCAAGGACAATATGCAAACCTGGGTACAAAAATATCCAACTCATATGCGAGGGTCGTGGGCTTCTTGCGAAGTGCTATAGGAAGATTCATCACCGAATATGAACTTGATGATCAATGGAGAGAAATATCAAATGACCCCCCAAAGATTCATATTGATGCCCTGCCCCCAGCTGGAAGCATTGTTTCACTTCAATATTTCCTGGGACAAGCACATAACAAACTTGTGGAGACTGCACGCATCTATGATCCCAATGGTAGCTTAGTCGCTGATAGTACTAAGCTGGGAAGGAGAGTGTTCCTAGGGTTCCTCATATATATCATCAATCAGCATAAAGATGGACGCAGTTGGTGTGGTGAATTTTCTATTGATGATCTACTAGTCAGAAATGAATCAACATTTGGAATCACGAAGGCAGCTTCTTCCCATGCAAGTTGTAAAGCAATGGCTAAGGATCTGAAACAGTTGGCAAAGATACTAGAGAAACACTTTCGCACAGCTCAAGGGCAGGTCCCTGGCTACTTCATTAAGCTTTTTTCTGAACTAAAAGAGAGCGCAGGAGAGCTCGGGCAGTACAACTCAGAGAAAACCAGGAAGTTCCATAAGTATCTGAGTTCGCATCTTGCACTCAGGTCTGCGATGTCAAGGAGGCACCTGTTTATGGATTTGTTCCGAGCGTACCAGCTACTTGGGAAAACTGCAAAGAAGGATTTGATATCCCTTCTAGGATCCATGTTTCCAGAAGATAAATGGCTTGACCAAGTAGACAAGCACCAAATGTTTATAAAAGTATCTGAGTATGGCATCGTGGAAGGTGACGCAGATAAGGCATCCAACAGTCAAGATCAGAAGAAGAAAAGATCATACAGTGGCGATCTTTTAGATTTGCTGGTGTTTATCCGCCACGTTACTGAGCACGGGGCGGATCACACGAAAGATGATAACATGGAGCAAAAACTCAAGAGTTTGGTTGAAATTGACTTGATAATTGCTAAGTATCTTTCGGCTGCTGTTGTAGACCTTATCAAGGCTTTGGTGAAGAGTGACTTGCTAAAAGACACGTTTTCTGACCCGTGGAATGCGTTTTCTAATTCTTCCTAATAGGTGGGTTAGCACGCTTGTTGGAGAAGAGAGGCACCACTGCATATCTTGTATTCAAAGTGCCGTCAAGGACTTGAGAGTGCCTCGTTCAGTAATCATAGTTAGCTGAAGTCTGTGGTGTAGGTGTTTAGCTTCCAAACTTGGTTAGAATTTTGAGTTTCCTGCTTACTGGCGTAGTATGCTTCATATTTTTTTCCTTTTTCTTGTGTTGAGGTTGGGCCAGGTGAGGTACCCCCCGCTCTCCAGTAAGGACCCCTGACTGTTAGTTCTATGCCAGGAGAGTAGTTTTGGTGTGATGTGTTGGGACTTGGGAGTTGTTCAGTCTTTTTGAGCTTAACCTGTAAAGTTGGTACCCGGCGTGCGTATGGATCGGAGCTGGTGAACAGAGAAGGAAGACGCGCACATTGGGGATGATTTTGGAGCGTGTTGACTGTTGAGGACTGGTAGGTTGCTAGGGAAATCAGC-ATAACCTGGATTACAGCCCTTGTTTGGGGGGTTTGTTCTCTGTCGGTTGGTCTGCAATGTTTATTTTAATCCCCTTTCTTATTGTTGGCTATTTCTTGTCATGCTACCCTCATGGAAATATCGATCTTTTACATTAGCATATAAAATATTAATTATTGGACCATAAATAATGCTTAAAGATATAATTCCATAGCAATTTAAATCAATGGAATATA]

[+] EMBL AK069550             [GAGGGGTTTTTTACTTTACCCATTGCCCTCCCACCTGCTCCCCCTCCTGCCCTCCCACCCTCTTGTGCGCATTCCGTCGAGCACGTCGCGGGCGCACCTCCCGCCGCTGCCTCGGCTTGCCCCACCGCGGATCGCAGAGCGAAGCATCCCCGCTAGGCTACTAAAGATGCCTCATCATGGTGGTAGGAAGAAGAAGAACAAGGGTGGGAAGGGGAAGCCTCGGAAGAAGACCGACGACCGCGGAGAGGCCAATGTCGGGTCGGGCGACAGCTCGCCCGCCGTCCGCGTCGAGGAGGAGGCGGAGGTGGAGGCGGAGGCGGAGGTGGGGACGGCGGTCGAGCCGCAGCGCTCGGGAACGTTGGCCTCGCCCACTGACGTCGTCGAGGCAGCCCAACACGGCCAGCGGCAGCAGCAGGCCTCCCAGTCCCAACAGACACCAAGCCCTCGAAGTTATGCAGCTGCAGTGGTGAACAAAAGAGAAGATGAAACAGTTGGCTACAACTTCCTTCAGTTCCTTCGAAGCTTCACAGTAGAGCACAGAGAAGGGCCTTTCTATGCTGGGGAACTAAAGAGTATGGTCTATCAGAACAGCAAAACTTTTTGTGTCTACTATGGGCACTTCCAAGGACAATATGCAAACCTGGGTACAAAAATATCCAACTCATATGCGAGGGTCGTGGGCTTCTTGCGAAGTGCTATAGGAAGATTCATCACCGAATATGAACTTGATGATCAATGGAGAGAAATATCAAATGACCCCCCAAAGATTCATATTGATGCCCTGCCCCCAGCTGGAAGCATTGTTTCACTTCAATATTTCCTGGGACAAGCACATAACAAACTTGTGGAGACTGCACGCATCTATGATCCCAATGGTAGCTTAGTCGCTGATAGTACTAAGCTGGGAAGGAGAGTGTTCCTAGGGTTCCTCATATATATCATCAATCAGCATAAAGATGGACGCAGTTGGTGTGGTGAATTTTCTATTGATGATCTACTAGTCAGAAATGAATCAACATTTGGAATCACGAAGGCAGCTTCTTCCCATGCAAGTTGTAAAGCAATGGCTAAGGATCTGAAACAGTTGGCAAAGATACTAGAGAAACACTTTCGCACAGCTCAAGGGCAGGTCCCTGGCTACTTCATTAAGCTTTTTTCTGAACTAAAAGAGAGCGCAGGAGAGCTCGGGCAGTACAACTCAGAGAAAACCAGGAAGTTCCATAAGTATCTGAGTTCGCATCTTGCACTCAGGTCTGCGATGTCAAGGAGGCACCTGTTTATGGATTTGTTCCGAGCGTACCAGCTACTTGGGAAAACTGCAAAGAAGGATTTGATATCCCTTCTAGGATCCATGTTTCCAGAAGATAAATGGCTTGACCAAGTAGACAAGCACCAAATGTTTATAAAAGTATCTGAGTATGGCATCGTGGAAGGTGACGCAGATAAGGCATCCAACAGTCAAGATCAGAAGAAGAAAAGATCATACAGTGGCGATCTTTTAGATTTGCTGGTGTTTATCCGCCACGTTACTGAGCACGGGGCGGATCACACGAAAGATGATAACATGGAGCAAAAACTCAAGAGTTTGGTTGAAATTGACTTGATAATTGCTAAGTATCTTTCGGCTGCTGTTGTAGACCTTATCAAGGCTTTGGTGAAGAGTGACTTGCTAAAAGACACGTTTTCTGACCCGTGGAATGCGTTTTCTAATTCTTCCTAATAGGTGGGTTAGCACGCTTGTTGGAGAAGAGAGGCACCACTGCATATCTTGTATTCAAAGTGCCGTCAAGGACTTGAGAGTGCCTCGTTCAGTAATCATAGTTAGCTGAAGTCTGTGGTGTAGGTGTTTAGCTTCCAAACTTGGTTAGAATTTTGAGTTTCCTGCTTACTGGCGTAGTATGCTTCATATTTTTTTCCTTTTTCTTGTGTTGAGGTTGGGCCAGGTGAGGTACCCCCCGCTCTCCAGTAAGGACCCCTGACTGTTAGTTCTATGCCAGGAGAGTAGTTTTGGTGTGATGTGTTGGGACTTGGGAGTTGTTCAGTCTTTTTGAGCTTAACCTGTAAAGTTGGTACCCGGCGTGCGTATGGATCGGAGCTGGTGAACAGAGAAGGAAGACGCGCACATTGGGGATGATTTTGGAGCGTGTTGACTGTTGAGGACTGGTAGGTTGCTAGGGAAATCAGC ATAACCTGGATTACAGCCCTTGTTTGGGGGGTTTGTTCTCTGTCGGTTGGTCTGCAATGTTTATTTTAATCCCCTTTCTTATTGTTGGCTATTTCTTGTCATGCTACCCTCATGGAAATATCGATCTTTTACATTAGCATATAAAATATTAATTATTGGACCATAAATAATGCTTAAAGATATAATTCCATAGCAATTTAAATCAATGGAATATA]
[+] EMBL AU166530             [                            TCCCACCTGCTCCCCCTCCTGCCCTCCCACCCTCTTGTGCGCATTCCGTCGAGCACGTCGCGGGCGCACCTCCCGCCGCTGCCTCGGCTTGCCCCACCGCGGATCGCAGAGCGAAGCATCCCCGCTAGGCTACTAAAGATGCCTCATCATGGTGGTAGGAAGAAGAAGAACAAGGGTGGGAAGGGGAAGCCTCGGAAGAAGACCGACGACCGCGGAGAGGCCAATGTCGGGTCGGGCGACAGCTCGCCCGCCGTCCGCGTCGAGGAGGAGGCGGAGGTGGAGGCGGAGGCGGAGGTGGGGACGGCGGTCGAGCCGCAGCGCTCGGGAACGTTGGCCTCGCCCACTGACGTCGTCGAGGCAGCCCAACACGGCCAGCGGCAGCAGCAGGCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU166529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTTAGCTGAAGTCTGTGGTGTAGGTGTTTAGCTTCCAAACTTGGTTAGAATTTTGAGTTTCCTGCTTACTGGCGTAGTATGCTTCATATTTTTTTCCTTTTTCTTGTTTTGAGGTTGGGCCAGGTGAGGTACCCCCCGCTCTCCAGTAAGGACCCCTGACTGTTAGTTCTATGCCAGGAGAGTAGTTTTGGTGTGATGTGTTGGGACTTGGGAGTTGTTCAGTCTTTTTGAGCTTAACCTGTAAAGTTGGTACCCGGCGTGCGTATGGATCGGAGCTGGTGAACAGAGAAGGAAGACGCGCACATTGGGGATGATTTTGGAGCGTGTTGACTGTTGAGGACTGGTAGGTTGCTAGGGAAATCAGCTATAACCTGGATTACAGCCCTTGTTTGGGGGGTTTGTTCTCTGTCGGTTGGTCTGCAATGTTTATTTTAAaaaaaaaaa                                                                                                                                         ]




>consensus_5001#0
GAGGGGTTTTTTACTTTACCCATTGCCCTCCCACCTGCTCCCCCTCCTGCCCTCCCACCC
TCTTGTGCGCATTCCGTCGAGCACGTCGCGGGCGCACCTCCCGCCGCTGCCTCGGCTTGC
CCCACCGCGGATCGCAGAGCGAAGCATCCCCGCTAGGCTACTAAAGATGCCTCATCATGG
TGGTAGGAAGAAGAAGAACAAGGGTGGGAAGGGGAAGCCTCGGAAGAAGACCGACGACCG
CGGAGAGGCCAATGTCGGGTCGGGCGACAGCTCGCCCGCCGTCCGCGTCGAGGAGGAGGC
GGAGGTGGAGGCGGAGGCGGAGGTGGGGACGGCGGTCGAGCCGCAGCGCTCGGGAACGTT
GGCCTCGCCCACTGACGTCGTCGAGGCAGCCCAACACGGCCAGCGGCAGCAGCAGGCCTC
CCAGTCCCAACAGACACCAAGCCCTCGAAGTTATGCAGCTGCAGTGGTGAACAAAAGAGA
AGATGAAACAGTTGGCTACAACTTCCTTCAGTTCCTTCGAAGCTTCACAGTAGAGCACAG
AGAAGGGCCTTTCTATGCTGGGGAACTAAAGAGTATGGTCTATCAGAACAGCAAAACTTT
TTGTGTCTACTATGGGCACTTCCAAGGACAATATGCAAACCTGGGTACAAAAATATCCAA
CTCATATGCGAGGGTCGTGGGCTTCTTGCGAAGTGCTATAGGAAGATTCATCACCGAATA
TGAACTTGATGATCAATGGAGAGAAATATCAAATGACCCCCCAAAGATTCATATTGATGC
CCTGCCCCCAGCTGGAAGCATTGTTTCACTTCAATATTTCCTGGGACAAGCACATAACAA
ACTTGTGGAGACTGCACGCATCTATGATCCCAATGGTAGCTTAGTCGCTGATAGTACTAA
GCTGGGAAGGAGAGTGTTCCTAGGGTTCCTCATATATATCATCAATCAGCATAAAGATGG
ACGCAGTTGGTGTGGTGAATTTTCTATTGATGATCTACTAGTCAGAAATGAATCAACATT
TGGAATCACGAAGGCAGCTTCTTCCCATGCAAGTTGTAAAGCAATGGCTAAGGATCTGAA
ACAGTTGGCAAAGATACTAGAGAAACACTTTCGCACAGCTCAAGGGCAGGTCCCTGGCTA
CTTCATTAAGCTTTTTTCTGAACTAAAAGAGAGCGCAGGAGAGCTCGGGCAGTACAACTC
AGAGAAAACCAGGAAGTTCCATAAGTATCTGAGTTCGCATCTTGCACTCAGGTCTGCGAT
GTCAAGGAGGCACCTGTTTATGGATTTGTTCCGAGCGTACCAGCTACTTGGGAAAACTGC
AAAGAAGGATTTGATATCCCTTCTAGGATCCATGTTTCCAGAAGATAAATGGCTTGACCA
AGTAGACAAGCACCAAATGTTTATAAAAGTATCTGAGTATGGCATCGTGGAAGGTGACGC
AGATAAGGCATCCAACAGTCAAGATCAGAAGAAGAAAAGATCATACAGTGGCGATCTTTT
AGATTTGCTGGTGTTTATCCGCCACGTTACTGAGCACGGGGCGGATCACACGAAAGATGA
TAACATGGAGCAAAAACTCAAGAGTTTGGTTGAAATTGACTTGATAATTGCTAAGTATCT
TTCGGCTGCTGTTGTAGACCTTATCAAGGCTTTGGTGAAGAGTGACTTGCTAAAAGACAC
GTTTTCTGACCCGTGGAATGCGTTTTCTAATTCTTCCTAATAGGTGGGTTAGCACGCTTG
TTGGAGAAGAGAGGCACCACTGCATATCTTGTATTCAAAGTGCCGTCAAGGACTTGAGAG
TGCCTCGTTCAGTAATCATAGTTAGCTGAAGTCTGTGGTGTAGGTGTTTAGCTTCCAAAC
TTGGTTAGAATTTTGAGTTTCCTGCTTACTGGCGTAGTATGCTTCATATTTTTTTCCTTT
TTCTTGTGTTGAGGTTGGGCCAGGTGAGGTACCCCCCGCTCTCCAGTAAGGACCCCTGAC
TGTTAGTTCTATGCCAGGAGAGTAGTTTTGGTGTGATGTGTTGGGACTTGGGAGTTGTTC
AGTCTTTTTGAGCTTAACCTGTAAAGTTGGTACCCGGCGTGCGTATGGATCGGAGCTGGT
GAACAGAGAAGGAAGACGCGCACATTGGGGATGATTTTGGAGCGTGTTGACTGTTGAGGA
CTGGTAGGTTGCTAGGGAAATCAGCATAACCTGGATTACAGCCCTTGTTTGGGGGGTTTG
TTCTCTGTCGGTTGGTCTGCAATGTTTATTTTAATCCCCTTTCTTATTGTTGGCTATTTC
TTGTCATGCTACCCTCATGGAAATATCGATCTTTTACATTAGCATATAAAATATTAATTA
TTGGACCATAAATAATGCTTAAAGATATAATTCCATAGCAATTTAAATCAATGGAATATA
clustalw multiple alignements is not computed in this case