cluster # 5008

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Oryza sativa
cluster # 5008 cluster # 5008 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5008#0 length = 759 sequences # 3

consensusID : consensus_5008#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 759
fasta sequence

                              [TACACCTATTTTGCTGGAATGGCATTGGCTGTGGTGGGAATTTTGGGTCATTTCAGCGAGACATTATTGCTCTTCTTTTTACCTGAGGTTCTTAACTTTCTGTGCTCAGTCCCACAGCTGTTTAAGTTTGTTCCCTGCCCAAGGCACAGGTTGCCAAGGTTTGATCCCCACACAGGACTGTTGACGGGTACCAAAGATGGTAACTTGGTAAACATATTCCTTAGGATATTTGGAAGATGCACAGAGAGGACCCTT-TGCATAAGGCTGCTCATATTTCAGGCGTTGTCATGCCTATTCTGCTTTTGG-CTGAGGTACATGATTACTGGATGGTAC-AAATGATCA-CCTGGACAGGAT-CC-CGGCAATCAAAATCTGTTATTACCTGACAGCTGTTCTCTCTCGGCAATATTTGTAGACTAGCAGTAAACAACCAACCTAAATCTTCCAAATAGGAGTAGCTGATGCAAGAACACCTTACTTACTGTCCACAATTTTTTAAATTTTCTCATGACTTAGCATTTGCATCTAGTTTGTGTCAAGCCTTCGGGGTTTTGGAGTTCGTACCCTTTTTTTTTTGTACAAAACAACTACATGAGATCTGAGGTGTGGCCTTATGAGGTTGCTACGATAGAGTT-CCTGAAGCTTTTGATCGAAACAAGACTTGTATTTTTGCAAAAAGNTTCTTCAAGGNACCTTGCTTGCGCTACTCTTCTGAAAATCATTACCGNCTTGNGCGACATTAGTAGCGGNAGCGNTTAAAGA]

[+] EMBL CB096298             [TACACCTATTTTGCTGGAATGGCATTGGCTGTGGTGGGAATTTTGGGTCATTTCAGCGAGACATTATTGCTCTTCTTTTTACCTGAGGTTCTTAACTTTCTGTGCTCAGTCCCACAGCTGTTTAAGTTTGTTCCCTGCCCAAGGCACAGGTTGCCAAGGTTTGATCCCCACACAGGACTGTTGACGGGTACCAAAGATGGTAACTTGGTAAACATATTCCTTAGGATATTTGGAAGATGCACAGAGAGGACCCTT TGCATAAGGCTGCTCATATTTCAGGCGTTGTCATGCCTATTCTGCTTTTGG CTGAGGTACATGATTACTGGATGGTAC AAATGATCA CCTGGACAGGATGCCGCGGCAATCAAAATCTGTTATTACCTGACAGCTGTTCTCTCTCGGCAATATTTGTAGACTAGCAGTAAACAACCAACCTAAATCTTCCAAATAGGAGTAGCTGATGCAAGAACACCTTACTTACTGTCCACAATTTTTTAAATTTTCTCATGACTTAGCATTTGCATCTAGTTTGTGTCAAGCCTTCGGGGTTTTGGAGTTCGTA CCTTTTTTTTTTGTACAAAACAACTACATGAGATCTGAGGTGTGGCCTTATGAGGNTGCTACGATAGAGTT CCTGAAGCTTTCGATCGAAACAAGACTTGTATTTTTGCAAACAGNTTCTTCAAGGNACCTTGCTTGCGCTACTCTTCTGAAAATCATTACCGNCTTGNGCGACATTAGTAGCGGNAGCGNTTAAAGA]
[+] EMBL BI812283             [                                                                                                                                                                                                             TGGTAAACATATTCCTTAGGATATTTGGAAGATGCACAGAGAGGACCCTT TGCATAAGGCTGCTCATATTTCAGGCGTTGTCATGCCTATTCTGCTTTTGGCCTGAGGTACATGATTACTGGATGGTAC AAATGATCA CCTGGACAGGAT CC CGGCAATCCAAATCTGTTATTACCTGACAGCTGTTCTCTCTCGGCAATATTTGTAGACTAGCAGTAAACAACCAACCTAAATCTTCCCAATAGGAGTAGCTGATGCAAGAACACCTTACTTACTGTCCACAATTTTTTAAATTTTCTCATGACTTAGCATTTGCATCTAGTTTGTGTCAAGCCTTCGGGGTTTTGGAGTTCGTACCCTTTTTTTTTTGTACAAAACAACTACATGAGATCTGAGGTGTGGCCTTATGAGGTTGCTACGATAGAGTTCCCTGAAGCTTTTGATCGAAAC AGACTTGTATTTTTGCAAAAA                                                                                    ]
[+] EMBL BI812287             [                                                                                                                                                                                                             TGGTAAACATATTCCTTAGGATATTTGGAAGATGCACAGAGAGGACCCTTGTGCATAA GCTGCTCATATTTCAGGCGTTGTCATGCCTATTCTGCTTTT G CTGAGGTACATGATTACTGGATGGTACAAAATGATCACCCTGGACAGGAT CC CGGCAATCAAAATCTGTTATTACCTGACAGCTGTTCTCTCTC GCAATATTTGTAGACTA CAGTAAACAACCAACCTAAATCTTCCAAATAGGAGTAGCTGATGCAAGAACACCTTACTTACTGTCCACAATTTTTTAAATTTTCTCATGACTTAGCATTTGCATCTAGTTTGTGTCAAGCCTTCGGGGTTTTGGAGTTCGTACCCTTTTTTTTTTGTACAAAACAACTACATGAGATCTGAGGTGTGGCCTTATGAGGTTGCTACGATAGAGTT CCTGAAGCTTTTGATCGAAACAAGACTTGTATTTTTGCAAAAA                                                                                    ]




>consensus_5008#0
TACACCTATTTTGCTGGAATGGCATTGGCTGTGGTGGGAATTTTGGGTCATTTCAGCGAG
ACATTATTGCTCTTCTTTTTACCTGAGGTTCTTAACTTTCTGTGCTCAGTCCCACAGCTG
TTTAAGTTTGTTCCCTGCCCAAGGCACAGGTTGCCAAGGTTTGATCCCCACACAGGACTG
TTGACGGGTACCAAAGATGGTAACTTGGTAAACATATTCCTTAGGATATTTGGAAGATGC
ACAGAGAGGACCCTTTGCATAAGGCTGCTCATATTTCAGGCGTTGTCATGCCTATTCTGC
TTTTGGCTGAGGTACATGATTACTGGATGGTACAAATGATCACCTGGACAGGATCCCGGC
AATCAAAATCTGTTATTACCTGACAGCTGTTCTCTCTCGGCAATATTTGTAGACTAGCAG
TAAACAACCAACCTAAATCTTCCAAATAGGAGTAGCTGATGCAAGAACACCTTACTTACT
GTCCACAATTTTTTAAATTTTCTCATGACTTAGCATTTGCATCTAGTTTGTGTCAAGCCT
TCGGGGTTTTGGAGTTCGTACCCTTTTTTTTTTGTACAAAACAACTACATGAGATCTGAG
GTGTGGCCTTATGAGGTTGCTACGATAGAGTTCCTGAAGCTTTTGATCGAAACAAGACTT
GTATTTTTGCAAAAAGNTTCTTCAAGGNACCTTGCTTGCGCTACTCTTCTGAAAATCATT
ACCGNCTTGNGCGACATTAGTAGCGGNAGCGNTTAAAGA

clustalw multiple alignements is not computed in this case