cluster # 5009

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Oryza sativa
cluster # 5009 cluster # 5009 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5009#0 length = 1705 sequences # 3
consensusID : consensus_5009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1705
fasta sequence
                              [GTTTTGCAGCGGGCGTGCGCCCATCACCATTCCTGCCCCCGTTCGCGACACCATCCATGGCGCGTTTCTCCGTCGCCAAGCCGTTCGCCGCCACCGCCACCGCGGCTGCTCCGCGCCTCTCTCCCCGCCGCCGCCGCCGCCGTCTTCTCGCCGCTAACGCCACCACCGCCAGGGGAGCGCTGCCGCTGCCGGCCCTGCGGAAACCCACCAAACCACCACCGCCGCCGCCCCTGCACCCGCGTCCCAGTCTCCCCGTACCCACCACCTCCAGCGACGACGATGGGGACATAAGGAGGAAGCCGGCGACGGGCGCGAGGGCTTCTCTGTGCTCGTCCGGCGCCGGCGACGTGCTCCGCCTGCTGGACGCGCTCCGCCTCCCGCCCGACGAGGACGTCTACGTCTCCCTCCTCAGAGACTGCGCCGACGCCGCCGAGGTCGCCTCCGTCCACGCGCACATCGCCGGAAAATTCGCCGTCTCTGGCCTCCCTTTGCCCCTCGCCAACCGGCTGGTGCTTGCATACGCGGCGTGCGGGGACATCGGGGCTGCGCGCCAGGTGTTCGATGAAATGCCAGTCAAGAATGGCATCACCTGGGCGACCATGGTCTCGGCCTACTCCGATGGTTGCTTCCATCATGACGCGTTACAGCTATTCGTGCAGATGTGTCACCAAGTGCGGGGGATCACCGGTGATCACTACACCCATGCCATTGTGGCGGTGCTGCGTTCGTGTGCTCGGGTGAACGAGCTTCAGTTCGGTGAGCAGGTACATGCTTTTGTTGTCAAGAAAAATGGAGTCTGTGGCGATGTTGGTAGCTCGCTATTACAGCTGTACTGCGACAGTGGGCAGCTCAGCAGCGCACGGCATGTGCTTGAGATGATGAGGTTCTCATGCCAAGAACCAGTTCCTGAGGCGGCCTGGACCAGCTTGATCACCGCATACCATCGTGACGGCATTCTTGACGATGCCATTGATGTCTTCAGGGGCATGGCTTCCTCGGGCATTGCCAGGAGCAGCTTCTCTCTGTCAAGCATCCTTGCGGTCTGTGCAGAGGCGAAGAACAAAGGATGCTATGGCCAGCAGGTGCATGCTGATGCCATCAAGCGTGGCCTGGACATGAACCAGTTCGTCGGGTCAGGGTTGCTTCATATGTACGCGAAGGAAGGGCAGCTTGCAGATGCAGCCAGGGCATTTGAGGCTATTGATGGCAAACCCGACGCAGTGTGCTGGAACGCCATGGCCATGGCATATGCTCGCGGT-GGAATGTAC-AGAGAGGCCACCA-GGGTGGTGTATCAG-ATGAAAGCTGCTGGAATGAATCCTTCGAAACTGACGATGAATGAGGTTAAGCTGGCCTGCTTCAGATGAGATACTGAAGAATGATTTCCTTGTTTTTGTA-CTGTATGATCTGTGTAGAAAGGAAGTAATTTAGAGACTTAGAGTTGTGCCCAGATCTTTTTAGAAGATGTTAACAGCCAGTAATGGTATCCAGAAGTGCCCTTCTACTTCACTTAGTCAGCTTGGAGTGTTAGTGTGAGAATATAATGTAGCATCTGGAGGTGTTCTTTTTCGCCTAACAATGTCTCCAAATATGTACTCTTTTATAGATTGTGCTGGATAGCTACAATATAGCGCTTCCAAACTTGTTTAGGAAAAAGTAAGGATCATCTCCAAAGATGAAATGGTCCGTCTCCAAAAAAAAAAAAAAA]

[+] EMBL AK106280             [GTTTTGCAGCGGGCGTGCGCCCATCACCATTCCTGCCCCCGTTCGCGACACCATCCATGGCGCGTTTCTCCGTCGCCAAGCCGTTCGCCGCCACCGCCACCGCGGCTGCTCCGCGCCTCTCTCCCCGCCGCCGCCGCCGCCGTCTTCTCGCCGCTAACGCCACCACCGCCAGGGGAGCGCTGCCGCTGCCGGCCCTGCGGAAACCCACCAAACCACCACCGCCGCCGCCCCTGCACCCGCGTCCCAGTCTCCCCGTACCCACCACCTCCAGCGACGACGATGGGGACATAAGGAGGAAGCCGGCGACGGGCGCGAGGGCTTCTCTGTGCTCGTCCGGCGCCGGCGACGTGCTCCGCCTGCTGGACGCGCTCCGCCTCCCGCCCGACGAGGACGTCTACGTCTCCCTCCTCAGAGACTGCGCCGACGCCGCCGAGGTCGCCTCCGTCCACGCGCACATCGCCGGAAAATTCGCCGTCTCTGGCCTCCCTTTGCCCCTCGCCAACCGGCTGGTGCTTGCATACGCGGCGTGCGGGGACATCGGGGCTGCGCGCCAGGTGTTCGATGAAATGCCAGTCAAGAATGGCATCACCTGGGCGACCATGGTCTCGGCCTACTCCGATGGTTGCTTCCATCATGACGCGTTACAGCTATTCGTGCAGATGTGTCACCAAGTGCGGGGGATCACCGGTGATCACTACACCCATGCCATTGTGGCGGTGCTGCGTTCGTGTGCTCGGGTGAACGAGCTTCAGTTCGGTGAGCAGGTACATGCTTTTGTTGTCAAGAAAAATGGAGTCTGTGGCGATGTTGGTAGCTCGCTATTACAGCTGTACTGCGACAGTGGGCAGCTCAGCAGCGCACGGCATGTGCTTGAGATGATGAGGTTCTCATGCCAAGAACCAGTTCCTGAGGCGGCCTGGACCAGCTTGATCACCGCATACCATCGTGACGGCATTCTTGACGATGCCATTGATGTCTTCAGGGGCATGGCTTCCTCGGGCATTGCCAGGAGCAGCTTCTCTCTGTCAAGCATCCTTGCGGTCTGTGCAGAGGCGAAGAACAAAGGATGCTATGGCCAGCAGGTGCATGCTGATGCCATCAAGCGTGGCCTGGACATGAACCAGTTCGTCGGGTCAGGGTTGCTTCATATGTACGCGAAGGAAGGGCAGCTTGCAGATGCAGCCAGGGCATTTGAGGCTATTGATGGCAAACCCGACGCAGTGTGCTGGAACGCCATGGCCATGGCATATGCTCGCGGT GGAATGTAC AGAGAGGCCACCA GGGTGGTGTATCAG ATGAAAGCTGCTGGAATGAATCCTTCGAAACTGACGATGAATGAGGTTAAGCTGGCCTGCTTCAGATGAGATACTGAAGAATGATTTCCTTGTTTTTGTA CTGTATGATCTGTGTAGAAAGGAAGTAATTTAGAGACTTAGAGTTGTGCCCAGATCTTTTTAGAAGATGTTAACAGCCAGTAATGGTATCCAGAAGTGCCCTTCTACTTCACTTAGTCAGCTTGGAGTGTTAGTGTGAGAATATAATGTAGCATCTGGAGGTGTTCTTTTTCGCCTAACAATGTCTCCAAATATGTACTCTTTTATAGATTGTGCT                                                                                              ]
[+] EMBL CA765085             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ggggGGCATCACCTGGGCGACCCTGGTCTCGGCCTACTCCGATGGTTGCTTCCATCATGACGCGTTACAGCTGTTCGCGCAGATGTGTCACCAAGTGCGGGGGATCACCGGTGATCACTACACCCATGCCATTGTGGCGGTGCTGCGTTCGTGTGCTCGGGTGAACGAGCTTCAGTTCGGTGAGCAGGTACATGCTTTTGTTGTCAAGAAAAATGGAGTCTGTGGCGATGTTGGTAGCTCGCTATTACAGCTGTACTGCGACAGTGGGCAGCTCAGCAGCGCACGGCATGTGCTTGAGATGATGAGGTTCTCATGCCAAGAACCAGTTCTTGAGGCGGCCTGGACCAGCTTGATCACCGCATACCATCGTGACGGCATTCTCGACGATGCCATTGATGTCTTCAGGGGCATGGCTTCCTCGGGCATTGCCAGGAGCAGCTTCTCTCTGTCAAGCATCCTTGCGGTCTGTGCAGAGGCGAAGAACAAAGGATGCTATGGCCAGCAGGTGCATGCTGATGCCATCAAGCGTGGCCTGGACATGAACCAGTTCGTCGGGTCAGGGTTGCTTCATATGTACGCGAAGGAAGGGCAGCTTGCAGATGCAGCCAGGGCATTTGAGGCTATTGATGGCAAACCTGACGCAGTGTGCTGGAACGCCATGGCCATGGCATATGCTCGCGGTGGGAATGTAC AGAGAGGCCACCANGGGNGGTGTATCAG ATGAAAGCTGCTGGAATGAATCCTTCGAAACTGACGATGAATGAGGTTAAGCTGGCCTGCTTCAGATGAGATACTGgaa                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU166612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTNCAAAAAAGCCCNCCA GGGTGGTGTATCAGAATAAAAGCTGTTGGAATGAATCCTTCGAAACTGCCGATAAATGAGGTTAAGCTGGCCTGCTTCAGATGAGATACTGAAGAATGATTCCCTTGTTTTTGNACCTGNATGATCTGTGTAGAAAGGAAGTAATTTAAAGNCTTAGAGTTGTGCCCAGATCTTTTTAGAAGATGTTANCAGCCAGTAATGGTATCCAGAAGTGCCCTTCTACTTCACTTAGTCAGCTTGGAGTGTTAGTGTGAGAATATAATGTAGCATCTGGAGGTGTTCTTTTTCGCCTAACAATGTCTCCAAATATGTACTCTTTTATAGATTGTGCTGGATAGCTACAATATAGCGCTTCCAAACTTGTTTAGGAAAAAGTAAGGATCATCTCCAAAGATGAAATGGTCCGTCTCCAAAAAAAAAAAAAAA]




>consensus_5009#0
GTTTTGCAGCGGGCGTGCGCCCATCACCATTCCTGCCCCCGTTCGCGACACCATCCATGG
CGCGTTTCTCCGTCGCCAAGCCGTTCGCCGCCACCGCCACCGCGGCTGCTCCGCGCCTCT
CTCCCCGCCGCCGCCGCCGCCGTCTTCTCGCCGCTAACGCCACCACCGCCAGGGGAGCGC
TGCCGCTGCCGGCCCTGCGGAAACCCACCAAACCACCACCGCCGCCGCCCCTGCACCCGC
GTCCCAGTCTCCCCGTACCCACCACCTCCAGCGACGACGATGGGGACATAAGGAGGAAGC
CGGCGACGGGCGCGAGGGCTTCTCTGTGCTCGTCCGGCGCCGGCGACGTGCTCCGCCTGC
TGGACGCGCTCCGCCTCCCGCCCGACGAGGACGTCTACGTCTCCCTCCTCAGAGACTGCG
CCGACGCCGCCGAGGTCGCCTCCGTCCACGCGCACATCGCCGGAAAATTCGCCGTCTCTG
GCCTCCCTTTGCCCCTCGCCAACCGGCTGGTGCTTGCATACGCGGCGTGCGGGGACATCG
GGGCTGCGCGCCAGGTGTTCGATGAAATGCCAGTCAAGAATGGCATCACCTGGGCGACCA
TGGTCTCGGCCTACTCCGATGGTTGCTTCCATCATGACGCGTTACAGCTATTCGTGCAGA
TGTGTCACCAAGTGCGGGGGATCACCGGTGATCACTACACCCATGCCATTGTGGCGGTGC
TGCGTTCGTGTGCTCGGGTGAACGAGCTTCAGTTCGGTGAGCAGGTACATGCTTTTGTTG
TCAAGAAAAATGGAGTCTGTGGCGATGTTGGTAGCTCGCTATTACAGCTGTACTGCGACA
GTGGGCAGCTCAGCAGCGCACGGCATGTGCTTGAGATGATGAGGTTCTCATGCCAAGAAC
CAGTTCCTGAGGCGGCCTGGACCAGCTTGATCACCGCATACCATCGTGACGGCATTCTTG
ACGATGCCATTGATGTCTTCAGGGGCATGGCTTCCTCGGGCATTGCCAGGAGCAGCTTCT
CTCTGTCAAGCATCCTTGCGGTCTGTGCAGAGGCGAAGAACAAAGGATGCTATGGCCAGC
AGGTGCATGCTGATGCCATCAAGCGTGGCCTGGACATGAACCAGTTCGTCGGGTCAGGGT
TGCTTCATATGTACGCGAAGGAAGGGCAGCTTGCAGATGCAGCCAGGGCATTTGAGGCTA
TTGATGGCAAACCCGACGCAGTGTGCTGGAACGCCATGGCCATGGCATATGCTCGCGGTG
GAATGTACAGAGAGGCCACCAGGGTGGTGTATCAGATGAAAGCTGCTGGAATGAATCCTT
CGAAACTGACGATGAATGAGGTTAAGCTGGCCTGCTTCAGATGAGATACTGAAGAATGAT
TTCCTTGTTTTTGTACTGTATGATCTGTGTAGAAAGGAAGTAATTTAGAGACTTAGAGTT
GTGCCCAGATCTTTTTAGAAGATGTTAACAGCCAGTAATGGTATCCAGAAGTGCCCTTCT
ACTTCACTTAGTCAGCTTGGAGTGTTAGTGTGAGAATATAATGTAGCATCTGGAGGTGTT
CTTTTTCGCCTAACAATGTCTCCAAATATGTACTCTTTTATAGATTGTGCTGGATAGCTA
CAATATAGCGCTTCCAAACTTGTTTAGGAAAAAGTAAGGATCATCTCCAAAGATGAAATG
GTCCGTCTCCAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case