Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 502 cluster # 502       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_502#0 length = 1011 sequences # 2  

consensusID : consensus_502#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1011
fasta sequence
                              [CGCATTCTTAGCCTAAAGATGGTGGCCACTGCTCGAATGCACGCTTGGCAGCTGCTACTCGTGGCGGTGGTCATCTCT-TGCTTCCACTGCCATCTCGCCGCTCACCATGGCGGGAAGAATGTCCGGCAACCACCGTCATCCGTCGTCGTCGTCGTCGGCTCCGTCCACTCCGGCTCAGACGCCACCAAGGCCGCGGTATCAGGTGCCCCGGTCGCCGTCCGGTGCCACGACGGCAACGGTCGGGATGTCTTCCGGCAGCAGGCCCTCACCGACCGTCGCGGCGAGTTCCGCGTCCACCTGCCGCCGG-AGGCCAAGAGCCGGCTGGCCTCCGTGACGTCGTGCTCGGTGAAGCTGCTCGCCAGCAATGCGGCGCGCCCATGCGACGACGCCGCCGCCACGTCCGCCGCTACTGCCAGAGGCTTCCGCCTCGCCGCCACGAAGCACAACGGCGGCGACGGCGCCCGAGTCTTCAACGCCGGAGCGTTCGCCGTCCACCCGGAGCTCTGCGACGACAAAGGGATCTTCTTCCCGCCGCTCCCTCTCGTGCCGGAGCCGCCGAACATCGGCGGCGTGCCAATTCCGCCGAATCCAATCACGCCGGCGCCGCCGTCTCTCGTCCCGCCGGTGTTCCCCACCCCATCTCCACCATCAATCCTGCCGCCGCTCACCCCACAACCGCCGCCATCGTCGTTAATACCGCCGGTGCTGCCGCTGCCGTTGCTCAACCCACCACCGCCTCCACCGCCCCCGCCATCTCTTCTACCGCCAGTGCCCCTCCTCCCGCCGTTGATCCCCGGCGTGCCACCGGCTTCGGCTTCCAGGAGTGGCCGGCCAGTGAGTACGCCCTGAGCAACTTAACACGCTGATTATTCTAGCTATGTGCTAATTAAGATGTACGGCAAGCATGTAATCCTAAGATCAAGAATCTACTGCAGTATACTGCAATCAATGTATACTTTTGGAATTTACCGACATGTCGAGTAAAAAGAATGTCAAATATATTGACGTTAT]

[+] EMBL AK060177             [CGCATTCTTAGCCTAAAGATGGTGGCCACTGCTCGAATGCACGCTTGGCAGCTGCTACTCGTGGCGGTGGTCATCTCT TGCTTCCACTGCCATCTCGCCGCTCACCATGGCGGGAAGAATGTCCGGCAACCACCGTCATCCGTCGTCGTCGTCGTCGGCTCCGTCCACTCCGGCTCAGACGCCACCAAGGCCGCGGTATCAGGTGCCCCGGTCGCCGTCCGGTGCCACGACGGCAACGGTCGGGATGTCTTCCGGCAGCAGGCCCTCACCGACCGTCGCGGCGAGTTCCGCGTCCACCTGCCGCCGG AGGCCAAGAGCCGGCTGGCCTCCGTGACGTCGTGCTCGGTGAAGCTGCTCGCCAGCAATGCGGCGCGCCCATGCGACGACGCCGCCGCCACGTCCGCCGCTACTGCCAGAGGCTTCCGCCTCGCCGCCACGAAGCACAACGGCGGCGACGGCGCCCGAGTCTTCAACGCCGGAGCGTTCGCCGTCCACCCGGAGCTCTGCGACGACAAAGGGATCTTCTTCCCGCCGCTCCCTCTCGTGCCGGAGCCGCCGAACATCGGCGGCGTGCCAATTCCGCCGAATCCAATCACGCCGGCGCCGCCGTCTCTCGTCCCGCCGGTGTTCCCCACCCCATCTCCACCATCAATCCTGCCGCCGCTCACCCCACAACCGCCGCCATCGTCGTTAATACCGCCGGTGCTGCCGCTGCCGTTGCTCAACCCACCACCGCCTCCACCGCCCCCGCCATCTCTTCTACCGCCAGTGCCCCTCCTCCCGCCGTTGATCCCCGGCGTGCCACCGGCTTCGGCTTCCAGGAGTGGCCGGCCAGTGAGTACGCCCTGAGCAACTTAACACGCTGATTATTCTAGCTATGTGCTAATTAAGATGTACGGCAAGCATGTAATCCTAAGATCAAGAATCTACTGCAGTATACTGCAATCAATGTATACTTTTGGAATTTACCGACATGTCGAGTAAAAAGAATGTCAAATATATTGACGTTAT]
[+] EMBL AA754576             [                                                 AGCTGCTACTCGTGGCGGTGGTCATCTCTCCGCTTCCACTGNCATCTCGCCGCTCACCATGGCGGGAAGAATGTCCGGCAACCACCGTCATCCGTCGTCGTCGTCGTCGGCTCCGTCCACTCCGGCTCAGACGCCACCAAGGCCGCGGTATCAGGTGCCCCGGTCGCCGTCCGGTGCCACGACGGCAACGGTCGGGATGTCTTCCGGCAGCAGGCCCTCACCGACTGTCGCGGCGAGTTCCGCGTCCACCTGCCGCCGGNTNTTTNTTATCCGGCTGGCCTCCGTGACGTCGTGCTCGGTGAAGCTGCTCGCCAGCAATGCGGCGCGCCCATGCGACGACNCCGCCGCCACGTCCGCCGCTACAGCCAGAAGCTTCCGCCTCGCCGCCACGAANCACAACGGCGGCGAC GNGCCCGANTCTTCAACGCCGGANCGTTCGCCGTCCACCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_502#0 CGCATTCTTAGCCTAAAGATGGTGGCCACTGCTCGAATGCACGCTTGGCAGCTGCTACTC GTGGCGGTGGTCATCTCTTGCTTCCACTGCCATCTCGCCGCTCACCATGGCGGGAAGAAT GTCCGGCAACCACCGTCATCCGTCGTCGTCGTCGTCGGCTCCGTCCACTCCGGCTCAGAC GCCACCAAGGCCGCGGTATCAGGTGCCCCGGTCGCCGTCCGGTGCCACGACGGCAACGGT CGGGATGTCTTCCGGCAGCAGGCCCTCACCGACCGTCGCGGCGAGTTCCGCGTCCACCTG CCGCCGGAGGCCAAGAGCCGGCTGGCCTCCGTGACGTCGTGCTCGGTGAAGCTGCTCGCC AGCAATGCGGCGCGCCCATGCGACGACGCCGCCGCCACGTCCGCCGCTACTGCCAGAGGC TTCCGCCTCGCCGCCACGAAGCACAACGGCGGCGACGGCGCCCGAGTCTTCAACGCCGGA GCGTTCGCCGTCCACCCGGAGCTCTGCGACGACAAAGGGATCTTCTTCCCGCCGCTCCCT CTCGTGCCGGAGCCGCCGAACATCGGCGGCGTGCCAATTCCGCCGAATCCAATCACGCCG GCGCCGCCGTCTCTCGTCCCGCCGGTGTTCCCCACCCCATCTCCACCATCAATCCTGCCG CCGCTCACCCCACAACCGCCGCCATCGTCGTTAATACCGCCGGTGCTGCCGCTGCCGTTG CTCAACCCACCACCGCCTCCACCGCCCCCGCCATCTCTTCTACCGCCAGTGCCCCTCCTC CCGCCGTTGATCCCCGGCGTGCCACCGGCTTCGGCTTCCAGGAGTGGCCGGCCAGTGAGT ACGCCCTGAGCAACTTAACACGCTGATTATTCTAGCTATGTGCTAATTAAGATGTACGGC AAGCATGTAATCCTAAGATCAAGAATCTACTGCAGTATACTGCAATCAATGTATACTTTT GGAATTTACCGACATGTCGAGTAAAAAGAATGTCAAATATATTGACGTTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)