cluster # 5025

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Oryza sativa
cluster # 5025 cluster # 5025 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5025#0 length = 2407 sequences # 3
consensusID : consensus_5025#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2407
fasta sequence
                              [CCGCCTCATCTTGTTCACAGTGCCTGCTTGCCTTCCTCCTCCTCCCTAGGGCTTCCTACCTAGCTAGCTAGCGATGCCAAGAAGAGACCATCGCGAAGAATAATCTCCCACGCAAGAACAAGAACCACCACCACCTCGCTCCCTCCCCTCCTCCTCCTGCTCCAGGGTTGTTGATTTGCCCTGCTGTTCTCTGATGGAGCATACCTCTGATGAGGATCCTGAGCTTGAAGCTTATGGCAGTGACACTTATGCGCTTTTGGAAGCAGGAGATATAAAAGTGATGAACGATAAGAATATGTACCAGTGTCCCTTTTGTTCAGATAAAAAGAATGACTACAATGCACATGGTTTACTGCAGCATGCCTTGGCTGTAGGATCTGCGGATGATCGGCCAGCGAAAGAGAAGGCTAACCATCGAGCCCTTGCATTGCATTTGAAAGATGATACCGCGGAATCGTCTAGGCCACTGTCACAGCCTCCTCAACATAGCAAGAACGATCTGTTTGTTTGGCCCTGGATGGGTATCATAGTCAATATGCCTGCTGAGTATGTTGGAAAAAGTGCAAACCGGCTGAAGGAGCATTTCTCGTGTTATCATCCATCGAAGGTGTATTCTGTATACAGTAAAGGTAGACCTTCGGGCAACGCTATTATTGAGTTTGGGAAGGACTGGAGTAGTTTTAGGAATGCATTGCAATTTGAAAGTGAATTTGAGAAGAAGGGGTGTGGTAAAAAGGCTTGGCTGGATTCAGGGCGTGGAGGGCCAGAGCCTTTTGGATGGATCGCAAGGGCTGATGATTACAATTCCTCGGGGCCAATTGGTGAGCATCTGAAAAGAAATGGTGACCTGAAAACAGTGAGTGATGTTGAGAATGAAGGAACAGTTAAAACTGACAAGCTTATGGCCAGTTTAGCTTGTCAAGTTAAAGAGAAGGAAATACACTTGGAGAAACTTCAGAGTGTGTATGATGAGAGATATCTGTCGCTTGGCAAAATGATGGAGAGCAGGGAAAATATGCTCAAGTCATGCAATACAGAAATCCAGAAGATGCAACAACTTGCTTATGAACAAGCACAAAGGACAGTTGATGAGAACCAGAAGCTACGTCTGAATCTCCAATCTATGATGCATGAGCTTGATGCAAATTGCAAAAGACTTGAAGAGTTGACTGCACAGGCTGATTCTGACAAAAGAAACCTTGAGGTGCTGATGCAAAAGAATGCAAAGAAAGCTGATCATCTTAGGCTGGCAGAATTGGAGCAGCAGAAAGCTGATGGCAATGTGCTGAGGCTTGTGGAAGAACACAATAGGGAGAAAGAAGCTACTTTGAACAGTAATATGAGGTTGCATGAACAATTGGACAGGAAGCAGAAACTTGAATTAGAAATAGCCCATCTGAAAGGCAAATTGCAAGTGACAAAGCACACGCAAGGCACTGAAGATTCAGATTTAGAGAAAACGATAGAGGCGCTGACAAATGAGCTGGAAGAAAAGATTGAAGATATGAATTATATGGACAACATGAACCAGACTCTAATTCTGAAGGAAAAAAGGAGCAAGGATGAGCTGCAGGAAGCTCGAAAATTGGTGATAGATTCTCTACAGAGATTGCCTTCTGACATAAGGAGCCAAGCACAGATAGGCATCAAGAGGATTGGTGAGCTTGACTTGAAAGTATTTTCGGATGCCTGCAGGCGAAGATTTTCAGAAGATTTTGCAGAAGTTGAAAGTTCTGTTCTTTGTTCGAAGTGGCAAAATGAAATCAAAGATCCGGAATGGCATCCTTTTAAGTCTGTTTGGGTCAATGGAAAAGAGTCGAAAGTAATCAGGGAGGATGACGAGAAGCTCCAACAACTGAAAGAGGAGTACGGTCAAGAAGTCTATGATGCGGTGACAAATGCTCTGTTCGAGCTCGACATGCATAGCATTGGTGGCAGGGATCCATTCCTGGAGCTATGGAACTACGAGGAGGGGCGGAAGGCGGGCACGAGGGAGGTGATTCAGCAAGTTATCAAGCTGTACAAGGCGACCAAGAGAAGGCGCTGATGGCTTGGCCGCCACTTGGTTCTTCATCAACCTACCTTTGACCTCAATGGATATGGTATGGAACACACATATATATACATGAACCAAATGCAGTACTGCATATATATACATGAACCTAATGCAGTACTACATATATTTTGGAGCTAGGGCTTTGAGACAGTGAAGTTTGTTACTGGATATTAGCTGGAGATATATTTTGCAGCCCTCTGAACTTATGACTACTAGTATTATGGGCCTCTGTGCTTTTATGTCCATTTGACTGGTTATGTGACTGATAGTCTGTGTATGCTACTTGCCAAACTTAATTTATGGCCAGTCTGGGCTGACCTAATATCTACTACAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK063522             [CCGCCTCATCTTGTTCACAGTGCCTGCTTGCCTTCCTCCTCCTCCCTAGGGCTTCCTACCTAGCTAGCTAGCGATGCCAAGAAGAGACCATCGCGAAGAATAATCTCCCACGCAAGAACAAGAACCACCACCACCTCGCTCCCTCCCCTCCTCCTCCTGCTCCAGGGTTGTTGATTTGCCCTGCTGTTCTCTGATGGAGCATACCTCTGATGAGGATCCTGAGCTTGAAGCTTATGGCAGTGACACTTATGCGCTTTTGGAAGCAGGAGATATAAAAGTGATGAACGATAAGAATATGTACCAGTGTCCCTTTTGTTCAGATAAAAAGAATGACTACAATGCACATGGTTTACTGCAGCATGCCTTGGCTGTAGGATCTGCGGATGATCGGCCAGCGAAAGAGAAGGCTAACCATCGAGCCCTTGCATTGCATTTGAAAGATGATACCGCGGAATCGTCTAGGCCACTGTCACAGCCTCCTCAACATAGCAAGAACGATCTGTTTGTTTGGCCCTGGATGGGTATCATAGTCAATATGCCTGCTGAGTATGTTGGAAAAAGTGCAAACCGGCTGAAGGAGCATTTCTCGTGTTATCATCCATCGAAGGTGTATTCTGTATACAGTAAAGGTAGACCTTCGGGCAACGCTATTATTGAGTTTGGGAAGGACTGGAGTAGTTTTAGGAATGCATTGCAATTTGAAAGTGAATTTGAGAAGAAGGGGTGTGGTAAAAAGGCTTGGCTGGATTCAGGGCGTGGAGGGCCAGAGCCTTTTGGATGGATCGCAAGGGCTGATGATTACAATTCCTCGGGGCCAATTGGTGAGCATCTGAAAAGAAATGGTGACCTGAAAACAGTGAGTGATGTTGAGAATGAAGGAACAGTTAAAACTGACAAGCTTATGGCCAGTTTAGCTTGTCAAGTTAAAGAGAAGGAAATACACTTGGAGAAACTTCAGAGTGTGTATGATGAGAGATATCTGTCGCTTGGCAAAATGATGGAGAGCAGGGAAAATATGCTCAAGTCATGCAATACAGAAATCCAGAAGATGCAACAACTTGCTTATGAACAAGCACAAAGGACAGTTGATGAGAACCAGAAGCTACGTCTGAATCTCCAATCTATGATGCATGAGCTTGATGCAAATTGCAAAAGACTTGAAGAGTTGACTGCACAGGCTGATTCTGACAAAAGAAACCTTGAGGTGCTGATGCAAAAGAATGCAAAGAAAGCTGATCATCTTAGGCTGGCAGAATTGGAGCAGCAGAAAGCTGATGGCAATGTGCTGAGGCTTGTGGAAGAACACAATAGGGAGAAAGAAGCTACTTTGAACAGTAATATGAGGTTGCATGAACAATTGGACAGGAAGCAGAAACTTGAATTAGAAATAGCCCATCTGAAAGGCAAATTGCAAGTGACAAAGCACACGCAAGGCACTGAAGATTCAGATTTAGAGAAAACGATAGAGGCGCTGACAAATGAGCTGGAAGAAAAGATTGAAGATATGAATTATATGGACAACATGAACCAGACTCTAATTCTGAAGGAAAAAAGGAGCAAGGATGAGCTGCAGGAAGCTCGAAAATTGGTGATAGATTCTCTACAGAGATTGCCTTCTGACATAAGGAGCCAAGCACAGATAGGCATCAAGAGGATTGGTGAGCTTGACTTGAAAGTATTTTCGGATGCCTGCAGGCGAAGATTTTCAGAAGATTTTGCAGAAGTTGAAAGTTCTGTTCTTTGTTCGAAGTGGCAAAATGAAATCAAAGATCCGGAATGGCATCCTTTTAAGTCTGTTTGGGTCAATGGAAAAGAGTCGAAAGTAATCAGGGAGGATGACGAGAAGCTCCAACAACTGAAAGAGGAGTACGGTCAAGAAGTCTATGATGCGGTGACAAATGCTCTGTTCGAGCTCGACATGCATAGCATTGGTGGCAGGGATCCATTCCTGGAGCTATGGAACTACGAGGAGGGGCGGAAGGCGGGCACGAGGGAGGTGATTCAGCAAGTTATCAAGCTGTACAAGGCGACCAAGAGAAGGCGCTGATGGCTTGGCCGCCACTTGGTTCTTCATCAACCTACCTTTGACCTCAATGGATATGGTATGGAACACACATATATATACATGAACCAAATGCAGTACTGCATATATATACATGAACCTAATGCAGTACTACATATATTTTGGAGCTAGGGCTTTGAGACAGTGAAGTTTGTTACTGGATATTAGCTGGAGATATATTTTGCAGCCCTCTGAACTTATGACTACTAGTATTATGGGCCTCTGTGCTTTTATGTCCATTTGACTGGTTATGTGACTGATAGTCTGTGTATTCTACTTGCCAAACTTAATTTATGGCCAGTCT                                         ]
[+] EMBL CB097117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCTTGACTTGAAAGTATTTTCGGATGCCTGCAGGCGAAGATTGTCAGAAGATTTTGCAGAAGTTGAAAGTTCTGTTCTTTGTTCGAAGTGGCAAAATGAAATCAAAGATCCGGAATGGCATCCTTTTAAGTCTGTTTGGGTCAATGGAAAAGAGTCGAAAGTAATCAGGGAGGATGACGAGAAGCTCCAACAACTGAAAGAGGAGTACGGTCAAGAAGTCTATGATGCGGTGACAAATGCTCTGTTCGAGCTCGACATGCATAGCATTGGTGGCAGGGATCCATTCCTGGAGCTATGGAACTACGAGGAGGGGCGGAAGGCGGGCACGAGGGAGGTGATTCAGCAAGTTATCAAGCTGTACAAGGCGACCAAGAGAAGGCGCTGATGGCTTGGCCGCCACTTGGTTCTTCATCAACCTACCTTTGACCTCAATGGATATGGTATGGAACACACATATATATACATGAACCAAATGCAGTACTGCATATATATACATGAACCTAATGCAGTACTACATATATTTTGGAGCTAGGGCTTTGAGACAGTGAAGTTTGTTACTGGATATTAGCTGGAGATATATTTTGCAGCTCTCTGAACTTATGACTACTAGTATTATGGGCCTCTGTGCTTTTATGTCCATTTGACTGGTTATGTGACTGATAGTCTGTGTATGCTACTTGCCAAACTTAATTTATGGCCAGTCTG                                        ]
[+] EMBL CA766236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGGGCACGAGGGAGGTGATTCAGCAAGTTATCAAGCTGTACAAGGCGACCAAGAGAAGGCGCTGATGGCTTGGCCGCCACTTGGTTCTTCATCAACCTACCTTTGACCTCAATGGATATGGTATGGAACACACATATATATACATGAACCAAATGCAGTACTGCATATATATACATGAACCTAATGCAGTACTACATATATTTTGGAGCTAGGGCTTTGAGACAGTGAAGTTTGTTACTGGATATTAGCTGGAGATATATTTTGCAGCCCTCTGAACTTATGACTACTAGTATTATGGGCCTCTGTGCTTTTATGTCCATTTGACTGGTTATGTGACTGATAGTCTGTGTATGCTACTTGCCAAACTTAATTTATGGCCAGTCTGGGCTGACCTAATATCTACTACAAAAAAAAAAAAAAAAAAA]




>consensus_5025#0
CCGCCTCATCTTGTTCACAGTGCCTGCTTGCCTTCCTCCTCCTCCCTAGGGCTTCCTACC
TAGCTAGCTAGCGATGCCAAGAAGAGACCATCGCGAAGAATAATCTCCCACGCAAGAACA
AGAACCACCACCACCTCGCTCCCTCCCCTCCTCCTCCTGCTCCAGGGTTGTTGATTTGCC
CTGCTGTTCTCTGATGGAGCATACCTCTGATGAGGATCCTGAGCTTGAAGCTTATGGCAG
TGACACTTATGCGCTTTTGGAAGCAGGAGATATAAAAGTGATGAACGATAAGAATATGTA
CCAGTGTCCCTTTTGTTCAGATAAAAAGAATGACTACAATGCACATGGTTTACTGCAGCA
TGCCTTGGCTGTAGGATCTGCGGATGATCGGCCAGCGAAAGAGAAGGCTAACCATCGAGC
CCTTGCATTGCATTTGAAAGATGATACCGCGGAATCGTCTAGGCCACTGTCACAGCCTCC
TCAACATAGCAAGAACGATCTGTTTGTTTGGCCCTGGATGGGTATCATAGTCAATATGCC
TGCTGAGTATGTTGGAAAAAGTGCAAACCGGCTGAAGGAGCATTTCTCGTGTTATCATCC
ATCGAAGGTGTATTCTGTATACAGTAAAGGTAGACCTTCGGGCAACGCTATTATTGAGTT
TGGGAAGGACTGGAGTAGTTTTAGGAATGCATTGCAATTTGAAAGTGAATTTGAGAAGAA
GGGGTGTGGTAAAAAGGCTTGGCTGGATTCAGGGCGTGGAGGGCCAGAGCCTTTTGGATG
GATCGCAAGGGCTGATGATTACAATTCCTCGGGGCCAATTGGTGAGCATCTGAAAAGAAA
TGGTGACCTGAAAACAGTGAGTGATGTTGAGAATGAAGGAACAGTTAAAACTGACAAGCT
TATGGCCAGTTTAGCTTGTCAAGTTAAAGAGAAGGAAATACACTTGGAGAAACTTCAGAG
TGTGTATGATGAGAGATATCTGTCGCTTGGCAAAATGATGGAGAGCAGGGAAAATATGCT
CAAGTCATGCAATACAGAAATCCAGAAGATGCAACAACTTGCTTATGAACAAGCACAAAG
GACAGTTGATGAGAACCAGAAGCTACGTCTGAATCTCCAATCTATGATGCATGAGCTTGA
TGCAAATTGCAAAAGACTTGAAGAGTTGACTGCACAGGCTGATTCTGACAAAAGAAACCT
TGAGGTGCTGATGCAAAAGAATGCAAAGAAAGCTGATCATCTTAGGCTGGCAGAATTGGA
GCAGCAGAAAGCTGATGGCAATGTGCTGAGGCTTGTGGAAGAACACAATAGGGAGAAAGA
AGCTACTTTGAACAGTAATATGAGGTTGCATGAACAATTGGACAGGAAGCAGAAACTTGA
ATTAGAAATAGCCCATCTGAAAGGCAAATTGCAAGTGACAAAGCACACGCAAGGCACTGA
AGATTCAGATTTAGAGAAAACGATAGAGGCGCTGACAAATGAGCTGGAAGAAAAGATTGA
AGATATGAATTATATGGACAACATGAACCAGACTCTAATTCTGAAGGAAAAAAGGAGCAA
GGATGAGCTGCAGGAAGCTCGAAAATTGGTGATAGATTCTCTACAGAGATTGCCTTCTGA
CATAAGGAGCCAAGCACAGATAGGCATCAAGAGGATTGGTGAGCTTGACTTGAAAGTATT
TTCGGATGCCTGCAGGCGAAGATTTTCAGAAGATTTTGCAGAAGTTGAAAGTTCTGTTCT
TTGTTCGAAGTGGCAAAATGAAATCAAAGATCCGGAATGGCATCCTTTTAAGTCTGTTTG
GGTCAATGGAAAAGAGTCGAAAGTAATCAGGGAGGATGACGAGAAGCTCCAACAACTGAA
AGAGGAGTACGGTCAAGAAGTCTATGATGCGGTGACAAATGCTCTGTTCGAGCTCGACAT
GCATAGCATTGGTGGCAGGGATCCATTCCTGGAGCTATGGAACTACGAGGAGGGGCGGAA
GGCGGGCACGAGGGAGGTGATTCAGCAAGTTATCAAGCTGTACAAGGCGACCAAGAGAAG
GCGCTGATGGCTTGGCCGCCACTTGGTTCTTCATCAACCTACCTTTGACCTCAATGGATA
TGGTATGGAACACACATATATATACATGAACCAAATGCAGTACTGCATATATATACATGA
ACCTAATGCAGTACTACATATATTTTGGAGCTAGGGCTTTGAGACAGTGAAGTTTGTTAC
TGGATATTAGCTGGAGATATATTTTGCAGCCCTCTGAACTTATGACTACTAGTATTATGG
GCCTCTGTGCTTTTATGTCCATTTGACTGGTTATGTGACTGATAGTCTGTGTATGCTACT
TGCCAAACTTAATTTATGGCCAGTCTGGGCTGACCTAATATCTACTACAAAAAAAAAAAA
AAAAAAA
clustalw multiple alignements is not computed in this case