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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 504 cluster # 504       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_504#0 length = 1177 sequences # 2  

consensusID : consensus_504#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1177
fasta sequence
                              [ACCTTCCATTGTTGAGTGTTGACACACAAGAATTGCAATTACAACAAGAAGAAGCAAGATCAAGAATCAAGATGGCGGAGTCGAAGCTGATATACGCGATGGTGGCGCGAGGGACGGTGGTGCTGGCGGAGCACACGGCGTACGCCGGCAACTTCCGGGACATCGCCGCGCAGTGCCTGCAGAAGCTCCCCGCCGGCGACAACCGCCTCACCTACACCTGCGACGCCCACACCTTCAACTTCCTCATCCACCAAGGCTACGCATACTGCGTGGTTGCAACCGAGTCGAGTGGCCGGCAGATTCCTCTCGCCTTGCTAGATATGATCAAGGAGGATTTCAACAAGAGGTATGCAGGAGGAAAAGCAGCCACAGCTGCAGCCAACAGCCTCAGCCGAGATTTCGGGTAACGTACGCTTCATTTCATCTGCCAGCAACTAATTTAAGGATTCAGATAGATCCATGCAGTACTTTAGGTCTATAAAACACCGATCATTATAAATTCCTGTATATATGCATGTTCAATACATAGTGTGTTGGCTTGATAGGCCAAGGCTTGGAGAGCAGATGAAGTACTGCATGGATCACCCTGAGGAGGTGAGCAAGCTAGCCAAAGTGAAAGCTCAGGTCTCTGAAGTTAAAGGCATCATGATGGAAAACATTGACAAGGCCATTGATCGCGGACAGCAGATCGACGTACTTGTCAGCAGGACAGAGCAACTCCATGACCAGGCTGCTGATTTCAGGCAGCAAGGGACGCGAGTGCGGCGCAAGATGTGGTACCAGAACATGAAGATCAAACTCATCGTCCTCGGTATCATCATCGCGCTCATCCTCATCATAATCCTCTCCGTTTGCCACGGCTTCAAATGCTAGATAGTATTCGTTATGCACTCCCCATTGTTGTCATCCTCAATTCATATATATATATATATATATATATATATATATATATATATATATATATATAATTGCTACTCCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTTCCACATTCATATTGATGTTTAGATTCATTAACATCAATATGAATGTGGGATATGCTAGAATGACTTATATTGTGAAACGGAGGAAGTAGCAAGGAATTATTTTGATAGTAGTACATTTTAAGGGTAATACTAGTAGTTGCTTTTTTGCCAAAAAACCCTTAAAAG]

[+] EMBL CB667109             [ACCTTCCATTGTTGAGTGTTGACACACAAGAATTGCAATTACAACAAGAAGAAGCAAGATCAAGAATCAAGATGGCGGAGTCGAAGCTGATATACGCGATGGTGGCGCGAGGGACGGTGGTGCTGGCGGAGCACACGGCGTACGCCGGCAACTTCCGGGACATCGCCGCGCAGTGCCTGCAGAAGCTCCCCGCCGGCGACAACCGCCTCACCTACACCTGCGACGCCCACACCTTCAACTTCCTCATCCACCAAGGCTACGCATACTGCGTGGTTGCAACCGAGTCGAGTGGCCGGCAGATTCCTCTCGCCTTGCTAGATATGATCAAGGAGGATTTCAACAAGAGGTATGCAGGAGGAAAAGCAGCCACAGCTGCAGCCAACAGCCTCAGCCGAGATTTCGGGTAACGTACGCTTCATTTCATCTGCCAGCAACTAATTTAAGGATTCAGATAGATCCATGCAGTACTTTAGGTCTATAAAACACCGATCATTATAAATTCCTGTATATATGCATGTTCAATACATAGTGTGTTGGCTTGATAGGCCAAGGCTTGGAGAGCAGATGAAGTACTGCATGGATCACCCTGAGGAGGTGAGCAAGCTAGCCAAAGTGAAAGCTCAGGTCTCTGAAGTTAAAGGCATCATGATGGAAAACATTGACAAGGCCATTGATCGCGGACAGCAGATCGACGTACTTGTCAGCAGGACAGAGCAACTCCATGACCAGGCTGCTGATTTCAGGCAGCAAGGGACGCGAGTGCGGCGCAAGATGTGGTACCAGAACATGAAGATCAAACTCATCGTCCTCGGTATCATCATCGCGCTCATCCTCATCATAATCCTCTCCGTTTGCCACGG                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB667110             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTCAGATAGATCCATGCAGTACTTTAGGTCTATAAAACACCGATCATTATAAATTCCTGTATATATGCATGTTCAATACATAGTGTGTTGGCTTGATAGCCCAAGGCTTGGAGAGCAGATGAAGTACTGCATGGATCCCCCTGAGGAGGTGAGCAAGCTAGCCAAAGTGAAAGCTCAGGTCTCTGAAGTTAAAGGCATCATGATGGAAAACATTGACAAGGCCATTGATCGCGGACAGCAGATCGACGTACTTGTCAGCAGGACAGAGCAACTCCATGACCAGGCTGTTGATTTCAGGCACCAAGGGACGCGAGTGCGGCGCAAGATGTGGTCCCAGAACATGAAGATCAAACTCATCGTCCTCGGTATCATCATCGCGCTCATCCTCATCATAATCCTCTCCGTTTGCCACGGCTTCAAATGCTAGATAGTATTCGTTATGCACTCCCCATTGTTGTCATCCTCAATTCATATATATATATATATATATATATATATATATATATATATATATATATATAATTGCTACTCCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTTCCACATTCATATTGATGTTTAGATTCATTAACATCAATATGAATGTGGGATATGCTAGAATGACTTATATTGTGAAACGGAGGAAGTAGCAAGGAATTATTTTGATAGTAGTACATTTTAAGGGTAATACTAGTAGTTGCTTTTTTGCCAAAAAACCCTTAAAAG]


>consensus_504#0 ACCTTCCATTGTTGAGTGTTGACACACAAGAATTGCAATTACAACAAGAAGAAGCAAGAT CAAGAATCAAGATGGCGGAGTCGAAGCTGATATACGCGATGGTGGCGCGAGGGACGGTGG TGCTGGCGGAGCACACGGCGTACGCCGGCAACTTCCGGGACATCGCCGCGCAGTGCCTGC AGAAGCTCCCCGCCGGCGACAACCGCCTCACCTACACCTGCGACGCCCACACCTTCAACT TCCTCATCCACCAAGGCTACGCATACTGCGTGGTTGCAACCGAGTCGAGTGGCCGGCAGA TTCCTCTCGCCTTGCTAGATATGATCAAGGAGGATTTCAACAAGAGGTATGCAGGAGGAA AAGCAGCCACAGCTGCAGCCAACAGCCTCAGCCGAGATTTCGGGTAACGTACGCTTCATT TCATCTGCCAGCAACTAATTTAAGGATTCAGATAGATCCATGCAGTACTTTAGGTCTATA AAACACCGATCATTATAAATTCCTGTATATATGCATGTTCAATACATAGTGTGTTGGCTT GATAGGCCAAGGCTTGGAGAGCAGATGAAGTACTGCATGGATCACCCTGAGGAGGTGAGC AAGCTAGCCAAAGTGAAAGCTCAGGTCTCTGAAGTTAAAGGCATCATGATGGAAAACATT GACAAGGCCATTGATCGCGGACAGCAGATCGACGTACTTGTCAGCAGGACAGAGCAACTC CATGACCAGGCTGCTGATTTCAGGCAGCAAGGGACGCGAGTGCGGCGCAAGATGTGGTAC CAGAACATGAAGATCAAACTCATCGTCCTCGGTATCATCATCGCGCTCATCCTCATCATA ATCCTCTCCGTTTGCCACGGCTTCAAATGCTAGATAGTATTCGTTATGCACTCCCCATTG TTGTCATCCTCAATTCATATATATATATATATATATATATATATATATATATATATATAT ATATATAATTGCTACTCCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTTCCACATTC ATATTGATGTTTAGATTCATTAACATCAATATGAATGTGGGATATGCTAGAATGACTTAT ATTGTGAAACGGAGGAAGTAGCAAGGAATTATTTTGATAGTAGTACATTTTAAGGGTAAT ACTAGTAGTTGCTTTTTTGCCAAAAAACCCTTAAAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)