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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5044#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2819 fasta sequence
[CACTTCCTCCTCCCCCACTCCCCCCCCTCCTCCACACAAGCACGGAGACCTCCCGCCTCGGCGGAGGAGGAGCAGCAGCCGCCGCAGGCGCTCGCGGTCGGGGTCGGGGAGGAGGGAGAATCTCGCGCTGTCTCCCGATTCATTCCGGGGGGTTGTGTGGTTTTGAGTTCTTGGACCGGGAAAAGGGGGCGTTCTTGGATTGATCAGTGGAGGAGGTGGGAGGAGGGGGGTTGGGGAGAGAGAGGAGAGGAGGCGGCGGGGATGGGGAGCTGCGGCGCGGGAGCGGCGGACAGCGAGTGGCCCGACGGCGTGACGGGGCGGGACGCGGAGGTCGGGGCGCTCGTGTGGGTGCGCCGCCGCAACGGATCCTGGTGGCCCGGCCAGGTCCTCAGCGCCGACGAGCTCCCGGAGAACTGCGTCGTCCCGCCGCGCTCCTCCGGCACGCCCATCAAGCTCCTCGGCCGCCCCGACGGCAGCATTGACTGGTATAATCTTGAGAAGTCTAAGCGTGTGAAGCCATTTCGATGTGGAGAGTATGAGGAATGTATAGAAAAAGCAAAGGCTCAAGCTCGCCAGCATAAGAGGGCCTACAATGAAGGAAAGTATGTCCGCAGGGAAGATGCTATCATGCATGCTCTTGAACTTGAAAGGGCTCGCTTTCCAAATGAAGATGATACTGATGAACATGATACTAGTGGCCTATTATTTGAATCCCAAAACAGCTATTGTGCAAAGTCCAAAAACATAAATGAGCTCAATAAAAAAATCGTCTCGCACTGCAAGGGATCTGTATGATATTGAAGAGGAGTCAGCTAAAGGTTTGTCTCAGGCCTTAACATTATATAAACAGCCACAGAATGTGTCCTCTTCAAGCACTAGGTATGCTTCATCATCAAGGAAGAAACATAAGGCATCAAATGATTTTGAGGATGACACAGTTCAAGGATCCCAACGTATGAGAGACCTTACGGAGATTGGATCAAAGAAACACAGTTCATACGTCCTAAATGGGCACCGGGATCTACCACTTCTTGAGAGTGCAAGCTTTGGTTATAGCTTGTCTGGTACCAATGGGATAAAAGGTGATCCGCAGTCTCATTCGGCAACGAAAAGGAAGCGTTCCAATATTGGCCAAGCTTATGAAAATTCAAGGAAGAAAGACAGACGTCGCCCTTTATCGAAGTTATGTAAAGATTCAGCTGTGGCAGTTCCAGCATATAGCCACTGGGATCCTTCAGGGCATTCTTCTGCCCAGTACTCAGGAGGCAAAATGTCCAATGCATTTGAACCAAGTAGGGGGAAATTTGGTTTCCCATTGGATGTAAATAATTATTCATACAGCTCAGGGACCTCAAGTGTGGAAACTTTATTAGATGCATCATGCGCAAATCATGATGGTGTTGCCAAGGTAATTCCAGTAAAGGAAGCGGAGGTCTCATGCATGCCTGGGTTTCTCAATAATGACTGCTCTGATGGCGATGAATATTTTGATACCCCCCTTGTTATGGAGGAAGATGCCCTCGAAGAAGATCATCTGCATAAATATGAATCATGTGCATCAGTCAAGGGCCAGATCTCAAAACCCAGGAAGCAAACTGCTGAATATACTGAACTGGTCATACCTTCACCTCATGGTCACAGAAGTTCTAAGAAGAAAAGCATGAGCTTTGTTAGTCAAAGAACACAAGAAAACCACAAGGATAGGACTTTGTTGGCACAACATGGAAGAACAGTAAAAGGGCAAGCATTAGACACTGATGCTGTTGAGGTGGATGCCAGGGTGAGCAGTGCTTTCTGTAAGCCCCCTGCACTTAAGAACAATATGCAACTTGCAATAGTTCCTGCTGATGGTTGTGCCAGTACTTTGGAGCAACAGTATTATGGAAGTGGACCTGAGCATGATGAATCATCTGAAACTATAAGCAACCGCTCACAATCAGAAAAGGGCGCACCATCTTCCCCGTATTATGAGCCACTTCAAGTGATACCACCTGAACAGAAATCTGGTCTAGAACCTTCCAGTCCCCATGTGGTAAAGCCAATCAAGAATGCACGGACAGACTATAAGGTATATGATGTAGAATTGGCTGCTCAAGGAAGCTACAAGGGCCATCGTGTGCCTCTTGTTTCTCTCATGAGTAAATGGAATGGTAAGCCCATTGTCGGTTACCCTATAACTGTGGAGGTTTTAAAAGATAGTAGTTCTGCGGCGAGCCGAAATGATCTGCGCCCAGCAACTAGCAGTCTTAACAACTTGCTAAAGAGGAGCGAACCTGCGGAACCAAGGCAAGCAAGATCGTCAC-ATTCATC-GAGA-CCTG-CA-TCAA--GA--CC-AAAGCCCAGCGG--TAAGAAAAAGA-TCTCAGAGCATGATACGGA-CAAGTCACGGCGGCCACACACAAAGAAATCAGCAACTTCACCGAGGAAAATGCGTAGGCTCTCATCTTTCGCCAGCAGTCGTAGAGATGGTGCAAGCAGGAAGCCCGTAGTTGGCAAGATTAGTGGGCCTACAATCGCGTGCATCCCGCTCCGACTTGTTTTCAGTAGGATCAACGAAGCTTTAAGTTTTCCAGTGAGATCAGAGAACCCTACATGAGGTGTGGGCTGCCAAGCCTGCGCTTGGAGATAGCCTGTGAACAGAGAGACATATTGCTAGTTTTGCATGTACATTAGCAGCCTTATAATTTTTAT-AAAAAAAATATTAATGCCTGCCATGTTCATATCAGCTATGTGCTTGTAACCGTGTAATTGCGATTATCCGCCTTGGTTTCAGTTGAAGCATCCCACAGTGGGAGGAAAATAAGCACCTTGAATATACTGATTGCATC]
[+] EMBL AK099982 [CACTTCCTCCTCCCCCACTCCCCCCCCTCCTCCACACAAGCACGGAGACCTCCCGCCTCGGCGGAGGAGGAGCAGCAGCCGCCGCAGGCGCTCGCGGTCGGGGTCGGGGAGGAGGGAGAATCTCGCGCTGTCTCCCGATTCATTCCGGGGGGTTGTGTGGTTTTGAGTTCTTGGACCGGGAAAAGGGGGCGTTCTTGGATTGATCAGTGGAGGAGGTGGGAGGAGGGGGGTTGGGGAGAGAGAGGAGAGGAGGCGGCGGGGATGGGGAGCTGCGGCGCGGGAGCGGCGGACAGCGAGTGGCCCGACGGCGTGACGGGGCGGGACGCGGAGGTCGGGGCGCTCGTGTGGGTGCGCCGCCGCAACGGATCCTGGTGGCCCGGCCAGGTCCTCAGCGCCGACGAGCTCCCGGAGAACTGCGTCGTCCCGCCGCGCTCCTCCGGCACGCCCATCAAGCTCCTCGGCCGCCCCGACGGCAGCATTGACTGGTATAATCTTGAGAAGTCTAAGCGTGTGAAGCCATTTCGATGTGGAGAGTATGAGGAATGTATAGAAAAAGCAAAGGCTCAAGCTCGCCAGCATAAGAGGGCCTACAATGAAGGAAAGTATGTCCGCAGGGAAGATGCTATCATGCATGCTCTTGAACTTGAAAGGGCTCGCTTTCCAAATGAAGATGATACTGATGAACATGATACTAGTGGCCTATTATTTGAATCCCAAAACAGCTATTGTGCAAAGTCCAAAAACATAAATGAGCTCAATAAAAAAATCGTCTCGCACTGCAAGGGATCTGTATGATATTGAAGAGGAGTCAGCTAAAGGTTTGTCTCAGGCCTTAACATTATATAAACAGCCACAGAATGTGTCCTCTTCAAGCACTAGGTATGCTTCATCATCAAGGAAGAAACATAAGGCATCAAATGATTTTGAGGATGACACAGTTCAAGGATCCCAACGTATGAGAGACCTTACGGAGATTGGATCAAAGAAACACAGTTCATACGTCCTAAATGGGCACCGGGATCTACCACTTCTTGAGAGTGCAAGCTTTGGTTATAGCTTGTCTGGTACCAATGGGATAAAAGGTGATCCGCAGTCTCATTCGGCAACGAAAAGGAAGCGTTCCAATATTGGCCAAGCTTATGAAAATTCAAGGAAGAAAGACAGACGTCGCCCTTTATCGAAGTTATGTAAAGATTCAGCTGTGGCAGTTCCAGCATATAGCCACTGGGATCCTTCAGGGCATTCTTCTGCCCAGTACTCAGGAGGCAAAATGTCCAATGCATTTGAACCAAGTAGGGGGAAATTTGGTTTCCCATTGGATGTAAATAATTATTCATACAGCTCAGGGACCTCAAGTGTGGAAACTTTATTAGATGCATCATGCGCAAATCATGATGGTGTTGCCAAGGTAATTCCAGTAAAGGAAGCGGAGGTCTCATGCATGCCTGGGTTTCTCAATAATGACTGCTCTGATGGCGATGAATATTTTGATACCCCCCTTGTTATGGAGGAAGATGCCCTCGAAGAAGATCATCTGCATAAATATGAATCATGTGCATCAGTCAAGGGCCAGATCTCAAAACCCAGGAAGCAAACTGCTGAATATACTGAACTGGTCATACCTTCACCTCATGGTCACAGAAGTTCTAAGAAGAAAAGCATGAGCTTTGTTAGTCAAAGAACACAAGAAAACCACAAGGATAGGACTTTGTTGGCACAACATGGAAGAACAGTAAAAGGGCAAGCATTAGACACTGATGCTGTTGAGGTGGATGCCAGGGTGAGCAGTGCTTTCTGTAAGCCCCCTGCACTTAAGAACAATATGCAACTTGCAATAGTTCCTGCTGATGGTTGTGCCAGTACTTTGGAGCAACAGTATTATGGAAGTGGACCTGAGCATGATGAATCATCTGAAACTATAAGCAACCGCTCACAATCAGAAAAGGGCGCACCATCTTCCCCGTATTATGAGCCACTTCAAGTGATACCACCTGAACAGAAATCTGGTCTAGAACCTTCCAGTCCCCATGTGGTAAAGCCAATCAAGAATGCACGGACAGACTATAAGGTATATGATGTAGAATTGGCTGCTCAAGGAAGCTACAAGGGCCATCGTGTGCCTCTTGTTTCTCTCATGAGTAAATGGAATGGTAAGCCCATTGTCGGTTACCCTATAACTGTGGAGGTTTTAAAAGATAGTAGTTCTGCGGCGAGCCGAAATGATCTGCGCCCAGCAACTAGCAGTCTTAACAACTTGCTAAAGAGGAGCGAACCTGCGGAACCAAGGCAAGCAAGATCGTCAC ATTCATC GAGA CCTG CA TCAA GA CC AAAGCCCAGCGG TAAGAAAAAGA TCTCAGAGCATGATACGGA CAAGTCACGGCGGCCACACACAAAGAAATCAGCAACTTCACCGAGGAAAATGCGTAGGCTCTCATCTTTCGCCAGCAGTCGTAGAGATGGTGCAAGCAGGAAGCCCGTAGTTGGCAAGATTAGTGGGCCTACAATCGCGTGCATCCAGCTCCGACTTGTTTTCAGTAGGATCAACGAAGCTTTAAGTTTTCCAGTGAGATCAGAGAACCCTACATGAGGTGTGGGCTGCCAAGCCTGCGCTTGGAGATAGCCTGTGAACAGAGAGACATATTGCTAGTTTTGCATGTACATTAGCAGCCTTATAATTTTTAT AAAAAAAATATTAATGCCTGCCATGTTCATATCAGCTATGTGCTTGTAACCGTGTAATTGCGATTATCCGCCTTGGTTTCAGTTGAAGCATCCCACAGTGGGAGGAAAATAAGCACCTTGAATATACTGATTGCATC]
[+] EMBL AK105731 [ TCAGCTAAAGGTTTGTCTCAGGCCTTAACATTATATAAACAGCCACAGAATGTGTCCTCTTCAAGCACTAGGTATGCTTCATCATCAAGGAAGAAACATAAGGCATCAAATGATTTTGAGGATGACACAGTTCAAGGATCCCAACGTATGAGAGACCTTACGGAGATTGGATCAAAGAAACACAGTTCATACGTCCTAAATGGGCACCGGGATCTACCACTTCTTGAGAGTGCAAGCTTTGGTTATAGCTTGTCTGGTACCAATGGGATAAAAGGTGATCCGCAGTCTCATTCGGCAACAAAAAGGAAGCGTTCCAATATTGGCCAAGCTTATGAAAATTCAAGGAAGAAAGACAGACGTCGCCCTTTATCGAAGTTATGTAAAGATTCGGCTGTGGCAGTTCCAGCATATAGCCACTGGGATCCTTCAGGGCATTCTTCTGCCCAGTACTCAGGAGGCAAAATGTCCAATGCATTTGAACCAAGTAGGGGGAAATTTGGTTTCCCATTGGATGTAAATAATTATTCATACAGCTCAGGGACCTCAAGTGTGGAAACTTTATTAGATGCATCATGCGCAAATCATGATGGTGTTGCCAAGGTAATTCCAGTAAAGGAAGCGGAGGTCTCATGCATGCCTGGGTTTCTCAATAATGACTGCTCTGATGGCGATGAATATTTTGATACCCCCCTTGTTATGGAGGAAGATGCCCTCGAAGAAGATCATCTGCATAAATATGAATCATGTGCATCAGTCAAGGGCCAGATCTCAAAACCCAGGAAGCAAACTGCTGAATATACTGAACTGGTCATACCTTCACCTCATGGTCACAGAAGTTCTAAGAAGAAAAGCATGAGCTTTGTTAGTCAAAGAACACAAGAAAACCACAAGGATAGGACTTTGTTGGCACAACATGGAAGAACAGTAAAAGGGCAAGCATTAGACACTGATGCTGTTGAGGTGGATGCCAGGGTGAGCAGTGCTTTCTGTAAGCCCCCTGCACTTAAGAACAATATGCAACTTGCAATAGTTCCTGCTGATGGTTGTGCCAGTACTTTGGAGCAACAGTATTATGGAAGTGGACCTGAGCATGATGAATCATCTGAAACTATAAGCAACCGCTCACAATCAGAAAAGGGCGCACCATCTTCCCCGTATTATGAGCCACTTCAAGTGATACCACCTGAACAGAAATCTGGTCTAGAACCTTCCAGTCCCCATGTGGTAAAGCCAATCAAGAATGCACGGACAGACTATAAGGTATATGATGTAGAATTGGCTGCTCAAGGAAGCTACAAGGGCCATCGTGTGCCTCTTGTTTCTCTCATGAGTAAATGGAATGGTAAGCCCATTGTCCGTTACCCTATAACTGTGGAGGTTTTAAAAGATAGTAGTTCTGCGGCGAGCCGAGATGATCTGCGCCCAGCAACTAGCAGTCTTAACAACTTGCTAAAGAGGAGCGAACCTGCGGAACCAAGGCAAGCAAGATCGTCAC ATTCATC GAGA CCTG CA TCAA GA CC AAAGCCCAGCGG TAAGAAAAAGA TCTCAGAGCATGATACGGA CAAGTCACGGCGGCCACACACAAAGAAATCAGCAACTTCACCGAGGAAAATGCGTAGGCTCTCATCTTTCGCCAGCAGTCGTAGAGATGGTGCAAGCAGGAAGCCCGTAGTTGGCAAGATTAGTGGGCCTACAATCGCGTGCATCCCGCTCCGACTTGTTTTCAGTAGGATCAACGAAGCTTTAAGTTTTCCAGTGAGATCAGAGAACCCTACATGAGGTGTGGGCTGCCAAGCCTGCGCTTGGAGATAGCCTGTGAACAGAGAGACATATTGCTAGTTTTGCATGTACATTAGCAGCCTTATAATTTTTAT AAAAAAAATATTAATGCCTGCCATGTTCATATCAGCTATGTGCTTGTAACCGTGTAATTGCGATTATCCGCCTTGGTTTCAGTTGAAGCATCCCACAGTGGGAGGAAAATAAG ]
[+] EMBL BI803436 [ tgcTCACAATTCATCAGAGACCCTGCCATTCAAATGATCCCGTAACCCCACCGGTTTAAGAAAAAGATTCTCAGACCATGATCCGGACCAAGTCAC GCGCCCACACACAAAGAAATCAGCAACTTCACCGAGGAAAATGCGTAGGCTCTCATCTTTCGCCA CAGTCGTAGAGATGGTGCAA CAGGAAGCCCGTAGTTGGCAAGATTAGTGGGCCTACAATCGCGTGCATCCCGCTCCGACTTGTTTTCAGTAGGATCAACGAAGCTTTAAGTTTTCCAGTGAGATCAGAGAACCCTACATGAGGTGTGGGCTGCCAAGCCTGCGCTTGGAGATAGCCTGTGAACAGAGAGACATATTGCTAGTTTTGCATGTACATTAGCAGCCTTATAATTTTTATAAAAAAAAATATTAATGCCTGCCATGTTCATATCAGCTATGTGCTTGTAACCGTGTAATTGCGATTATCCGCCTTGGTTTCAGTTGAAGCATCCCACAGTGGGAGGAAAATAAGCACCTTGAATAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||