cluster # 5089

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Oryza sativa
cluster # 5089 cluster # 5089 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5089#0 length = 487 sequences # 3

consensusID : consensus_5089#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 487
fasta sequence

                              [AAAGAATAACTCAATGGGAGTTTTGGGTCTTTATTTCTCTGTACCAACTCAATAGGCTGAGTAGCAACAAAGAATAATAAAACCACAGAAGCTCAAAAGTGCAAAGATGAGCTCTGTGCGCCATCACTTCGGCTACAATATTACTGCAAATGCAAAAGGAGCTAAACCTGCAATATATCATCTAATCGAGAACCCTCATCTCATGCATCAGCTTTCTTTAGCTTGGCTTCCTCTCTGTCTATCTCTTCAAGTGCGCTCCAAAGCTTGGGGTCTTCATAATCCTTGATGATCAACGTGGCTCCTGCATCCAGTAGGGACTTCTCTGGGTTCCTTGTTGCCACAGCAACAA-CAGGAATTCCAGCAGCAACGNCTGCACGTGTGCCTGAAGCAGAATCCTCAAAGATGAGGTGTGGTCCGANGCAACTGAGGTCCTTGAGAGCTTCAGGTAGGGGAATGGGGCGGGTTTCGGGTTNTAACATTTGCCTCC]

[+] EMBL D42733               [AAAGAATAACTCAATGGGAGTTTTGGGTCTTTATTTCTCTGTACCAACTCAATAGGCTGAGTAGCAACAAAGAATAATAAAACCACAGAAGCTCNNAAGTGCAAAGATGAGCTCTGTGCGCCATCACTTCGGCTACAATATTACTGCAAATGCAAAAGGAGCTAAACCTGCAATATATCATCTAATCGAGAACCCTCATCTCATGCATCAGCTTTCTTTAGCTTGGCTTCCTCTCTGTCTATCTCTTCAAGTGCGCTCCAAAGCTTGGGGTCTTCATAATCCTTGATGATCAACGTGGCTCCTGCATCCAGTAGGGACTTCTCTGGGTTCCTTGTTGCCACAGCAACAA CAGGAATTCCAGCAGCAACGNCTGCACGTGTGCCTGAAGCAGAATCCTCAAAGATGAGGTGTGGTCCGANGCAACTGAGGTCCTTGAGAGCTTCAGGTAGGGGAATGGGGCGGGTTTCGGGTTNTAACATTTGCCTCC]
[+] EMBL C27262               [           CAATGGGAGTTTTGGGTCTTTATTTCTCTGTACCAACTCAATAGGCTGAGTAGCAACAAAGAATAATAAAACCACAGAAGCTCAAAAGTGCAAAGATGAGCTCTGTGCGCCATCACTTCGGCTACAATATTACTGCAAATGCAAAAGGAGCTAAACCTGCAATATATCATCTAATCGAGAACCCTCATCTCATGCATCAGCTTTCTTTAGCTTGGCTTCCTCTCTGTCTATCTCTTCAAGTGCGCTCCAAAGCTTGGGGTCTTCATAATCCTTGATGATCAACGTGGCTCCTGCATCCAGTAGGGACTTCTCTGGGNTCCTTGTTGCCACAG AACAACCAGGAATTCCAGCAGCAAC                                                                                                                       ]
[+] EMBL CF336070             [        ttttttTGGGAGTTTTGGGTCTTTATTTCTCTGTACCAACTCAATAGGCTGAGTAGCAACAAAGAATAATAAAACCACAGAAGCTCAAAAGTGCAAAGATGAGCTCTGTGCGCCATCACTTCGGCTACAATATTACTGCAAATGCAAAAGGAGCTAAACCTGCAATATATCATCTAATCGAGAACCCTCATCTCATGCATCAGCTTTCTTTAGCTTGGCTTCCTCTCTGTCTATCTCTTCAAGTGCGCTCCAAAGCTTGGGGTCTTCATAATCCTTGATGATCAACGTGGCTCCTGCATCCAGTAGGGACTTCTCTGGGTTCCTTGTTGCCACAGCAACAA CAGGAATTCCAGCAGCAACGCCTGCA                                                                                                                ]




>consensus_5089#0
AAAGAATAACTCAATGGGAGTTTTGGGTCTTTATTTCTCTGTACCAACTCAATAGGCTGA
GTAGCAACAAAGAATAATAAAACCACAGAAGCTCAAAAGTGCAAAGATGAGCTCTGTGCG
CCATCACTTCGGCTACAATATTACTGCAAATGCAAAAGGAGCTAAACCTGCAATATATCA
TCTAATCGAGAACCCTCATCTCATGCATCAGCTTTCTTTAGCTTGGCTTCCTCTCTGTCT
ATCTCTTCAAGTGCGCTCCAAAGCTTGGGGTCTTCATAATCCTTGATGATCAACGTGGCT
CCTGCATCCAGTAGGGACTTCTCTGGGTTCCTTGTTGCCACAGCAACAACAGGAATTCCA
GCAGCAACGNCTGCACGTGTGCCTGAAGCAGAATCCTCAAAGATGAGGTGTGGTCCGANG
CAACTGAGGTCCTTGAGAGCTTCAGGTAGGGGAATGGGGCGGGTTTCGGGTTNTAACATT
TGCCTCC

clustalw multiple alignements is not computed in this case