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Oryza sativa
cluster # 5104 cluster # 5104       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5104#0 length = 3187 sequences # 2  
 consensus_5104#1 length = 664 sequences # 1  
consensusID : consensus_5104#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3187
fasta sequence 
                              [ACAGCGTCGCAGCGCTGGAGATCGAACCACGCAACCCAACCCGTGCTGCGAATCACACCACGCCCTACCAGCTGGACCGGAGATGGACCAGCCGCACCTCGCAGCCACCCCACGGCCCCCGAGAAGAGAACCCCGCCACCGCGGGAGCGGGACCCACCCCGCCGGTGGCTGCGTCGTAGCTGCGGCATCCACACCCAGTCAGGCAGTCACCCACTCCCACTCCCCCGCTCGAAAACCCCCAAAACCACCCGGAGAAACAGCAGGAAGGAGAGGAAGAGAGGTGGAGGTTGCCTTTGGCTGGCTGTGGAGAGGGTGAGACGGTGGGTGGGAAATTTCAAACTTGGCCGCCGGCGTGCTGTTCTTGGCTCCCCGGGGCGGCGCTGAGAAGGATGGGGGTGTCCGGGAAAGGCGGTTTCTTGGCGGTGGTGGCGGTGGTGGGGAGAGGCGCTGTCCTGCTCGCGGATGCGGCGAGGGTGGTGGATTTCGGCGAGGTGGGCTCGCCGCCTGCGCCGTCACCGGTGGCGGACGCGCCCTATCTCCCTGATGTGGCGTCTCCTCCTGCAGTGCAAACTGAGGGTGGCAACAATTACCAAAAGGAGATCCTTGTTGCAGTCATCTTGGCACTTGCCGCAGTCATTGTAACGGTGGTATCAGCAATTTATGCATGGACCTTCTGGAAAAAAACTCGTCAAGCTCTGGATTCCAAGGACAAGAAACTCTCAAGTACTACCAAGGGGCACATGCTGTTACCCATGTTTGGGAAACTGAATTCAATGAAAACGTCCAAGAAAGAAGTGGTTGCAATGATGGACTTTTCAGTCTTAGACTCTGCTACGGGCAAGTTCAGTGAGAATAACATATTGGGAAAAGGAGGTTTTGGTTGTGTATATAGAGCATGTCTTGATAGAGGGGTTGTTGCAGCTGTTAAGAAACTTAATTGTTGTAGACAAGAAGTAGAGAAAGAATTTGAGAATGAGCTGGAGTTTCTTGGAAAAATTCGGCATCCCAACGTGATCTCCGTGCTAGGATATTGCATTCATGAAGACACAAGGCTGCTTGTATATGAGCTGATGCAAAATGGTTCTCTAGAAACACAATTACATGGACCTTCAAATGGATCAGCTTTAAGTTGGTACATTCGGTTGAAAATTGCTCTTGATGCAGCAAGAGGATTGGAACACCTTCATGAGCACTGCAATCCATTGATTATTCACAGAGATATAAAGTCGTCCAATATACTTCTTGATTCAGACTTCAATGCAAAGATATCAGATTTTGGCCTTGCAATTTATGGTGGGAACCACAACAAAGCTGATTTAAAGCCTTCTGGAACTGTCGGTTATGTTGCACAAGAGTATCTTCTAGATGGTCAATTAACTGAGAAGAGTGATGTGTATGCTTTTGGGGTGGTTCTTCTCGAACTGTTACTTGGAAGGAAACCAGTAGAGAAGATTGGAGATTCTCACTGTCAATCCATTGTGTCATGGGTATGTTTTGCGATTTCCGTGCTTTGTGGTTTATGCATCTAATAGTTCTGAAAAATGTGTGATGCCTGAGGTTTTAGCAGACTGTTATTGTGTTTCCTTATAGCAATTGATAATTGAATATGTCTTTGGATGAACTAATTTCATGGATATATCGTTGATGCAGTGAAATCTTAATTAGTTGAGTGCATTGATGTGCCTCACACTTGAGATACTTTTTACATTTTCTTCACAAATATTCAGTATTTAAATTATTTTCTTGCAGCAAATGTGTTGATAAATAAAACCTGACGTAAGTATTATATTTCAAGCTTCACATTGCACTGAATTAAGAATATTTGCAGCTCCCCATAGAATGAGTTAATAATGCCCATGACAGTATGTCAATTTAGAGCTTTGATACATCTCCTTAGTATTCAGTTTGTACTAGCAAATTTGCACTCATCTATTTCTGCCCAATTGGCCGTTTACCCGTGGTAAAAATTCTATTAGGGCTGGGCATATTCCACACTTCTGGTTCATGGTTATGGTAACCAAAACTTGTCCCAGTAGGCAAACAGACACTGACCTTGTCCGTTCACCCATCTACACTACTGACACGCGGATATTCCAAAAGCCATTTACTGTACCTATAGCATGATGTATTGATGTTGCATTGGCTACCGAATTCTGACTTTTCAACCTTAAATTTAAACTACGCACAAAGACTTATTATCTATACGCATCTTTTATGCTCTTTTTTTTGGTTACCTAAGTGTTTAAATTTCTACCTTTCCAGAACGACATAGTCCTCCATTTCATATATCTGGTTGATTATTATCTCTTTTACTTTAGTTCATAGTTGCATGACAAACTAATTCCATTAGCCTTTTCTCCGTTGTAAAGTGGAATAGTCAGTAAACCACAAAGTTATCTTCTGCAGGCCATACCTCAGATAAGTGATAGAACGAAGCTACCAAATATAATTGATCCGGTTATCAGAAACACCATGGATTTGAGGCATCTATATCAGGTTGCTGCAGTAGCTGTCCTTTGTGTCCAGCCAGAGCCGAGCTATAGACCGCTAATCACAGATGTTCTACATTCTCTTGTTCCTCTTGTTCCTGTAGAGCTTGGGGGGACACTGAGGGTAGTAGAGCAACCCCGTCAAACGGGCTAACGAAATGGGCCCTTTTCTGAACAAGTATGATATATTCGATGGCCTGATGAAAATATTTCGCGCTACGCGTTTCCAAAGATTGTGGAAGTTTTCCCATCAAACAGGTTGGGTGCTTGAGTAGGATGACAACGATGGCTGAACTATCCTGGAGGGAAATTTTCATCTAATTGCCATTTTTGAAGACCAAAACGCTTGCCTACGAAGAGATGACAAGCTACTGCCGACATTTGTAGGGCATTCTTTAAGGGTACATCAATCTAACATTGATTTCAGAGGTAGTTTTGATTTGTTGGTGCTCTTTAACTCCTGTGTGACCATCCTGTTAGATTGTGGGGCCTAGTTCGGCGATTTCGTGTAAATTTCATCGCCGGTAGATTTGATGTAAATTCGAGTGGGTAGGCATTCATGATCATTTGTTACAGAAAACCACTTAATAGACAAAATTTATTCAGAATATTGTAGTGTTGTTGCGAGCAGTTTAATGTTTGATCTGATGATTTATGAGACATCTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK064847             [ACAGCGTCGCAGCGCTGGAGATCGAACCACGCAACCCAACCCGTGCTGCGAATCACACCACGCCCTACCAGCTGGACCGGAGATGGACCAGCCGCACCTCGCAGCCACCCCACGGCCCCCGAGAAGAGAACCCCGCCACCGCGGGAGCGGGACCCACCCCGCCGGTGGCTGCGTCGTAGCTGCGGCATCCACACCCAGTCAGGCAGTCACCCACTCCCACTCCCCCGCTCGAAAACCCCCAAAACCACCCGGAGAAACAGCAGGAAGGAGAGGAAGAGAGGTGGAGGTTGCCTTTGGCTGGCTGTGGAGAGGGTGAGACGGTGGGTGGGAAATTTCAAACTTGGCCGCCGGCGTGCTGTTCTTGGCTCCCCGGGGCGGCGCTGAGAAGGATGGGGGTGTCCGGGAAAGGCGGTTTCTTGGCGGTGGTGGCGGTGGTGGGGAGAGGCGCTGTCCTGCTCGCGGATGCGGCGAGGGTGGTGGATTTCGGCGAGGTGGGCTCGCCGCCTGCGCCGTCACCGGTGGCGGACGCGCCCTATCTCCCTGATGTGGCGTCTCCTCCTGCAGTGCAAACTGAGGGTGGCAACAATTACCAAAAGGAGATCCTTGTTGCAGTCATCTTGGCACTTGCCGCAGTCATTGTAACGGTGGTATCAGCAATTTATGCATGGACCTTCTGGAAAAAAACTCGTCAAGCTCTGGATTCCAAGGACAAGAAACTCTCAAGTACTACCAAGGGGCACATGCTGTTACCCATGTTTGGGAAACTGAATTCAATGAAAACGTCCAAGAAAGAAGTGGTTGCAATGATGGACTTTTCAGTCTTAGACTCTGCTACGGGCAAGTTCAGTGAGAATAACATATTGGGAAAAGGAGGTTTTGGTTGTGTATATAGAGCATGTCTTGATAGAGGGGTTGTTGCAGCTGTTAAGAAACTTAATTGTTGTAGACAAGAAGTAGAGAAAGAATTTGAGAATGAGCTGGAGTTTCTTGGAAAAATTCGGCATCCCAACGTGATCTCCGTGCTAGGATATTGCATTCATGAAGACACAAGGCTGCTTGTATATGAGCTGATGCAAAATGGTTCTCTAGAAACACAATTACATGGACCTTCAAATGGATCAGCTTTAAGTTGGTACATTCGGTTGAAAATTGCTCTTGATGCAGCAAGAGGATTGGAACACCTTCATGAGCACTGCAATCCATTGATTATTCACAGAGATATAAAGTCGTCCAATATACTTCTTGATTCAGACTTCAATGCAAAGATATCAGATTTTGGCCTTGCAATTTATGGTGGGAACCACAACAAAGCTGATTTAAAGCCTTCTGGAACTGTCGGTTATGTTGCACAAGAGTATCTTCTAGATGGTCAATTAACTGAGAAGAGTGATGTGTATGCTTTTGGGGTGGTTCTTCTCGAACTGTTACTTGGAAGGAAACCAGTAGAGAAGATTGGAGATTCTCACTGTCAATCCATTGTGTCATGGGTATGTTTTGCGATTTCCGTGCTTTGTGGTTTATGCATCTAATAGTTCTGAAAAATGTGTGATGCCTGAGGTTTTAGCAGACTGTTATTGTGTTTCCTTATAGCAATTGATAATTGAATATGTCTTTGGATGAACTAATTTCATGGATATATCGTTGATGCAGTGAAATCTTAATTAGTTGAGTGCATTGATGTGCCTCACACTTGAGATACTTTTTACATTTTCTTCACAAATATTCAGTATTTAAATTATTTTCTTGCAGCAAATGTGTTGATAAATAAAACCTGACGTAAGTATTATATTTCAAGCTTCACATTGCACTGAATTAAGAATATTTGCAGCTCCCCATAGAATGAGTTAATAATGCCCATGACAGTATGTCAATTTAGAGCTTTGATACATCTCCTTAGTATTCAGTTTGTACTAGCAAATTTGCACTCATCTATTTCTGCCCAATTGGCCGTTTACCCGTGGTAAAAATTCTATTAGGGCTGGGCATATTCCACACTTCTGGTTCATGGTTATGGTAACCAAAACTTGTCCCAGTAGGCAAACAGACACTGACCTTGTCCGTTCACCCATCTACACTACTGACACGCGGATATTCCAAAAGCCATTTACTGTACCTATAGCATGATGTATTGATGTTGCATTGGCTACCGAATTCTGACTTTTCAACCTTAAATTTAAACTACGCACAAAGACTTATTATCTATACGCATCTTTTATGCTCTTTTTTTTGGTTACCTAAGTGTTTAAATTTCTACCTTTCCAGAACGACATAGTCCTCCATTTCATATATCTGGTTGATTATTATCTCTTTTACTTTAGTTCATAGTTGCATGACAAACTAATTCCATTAGCCTTTTCTCCGTTGTAAAGTGGAATAGTCAGTAAACCACAAAGTTATCTTCTGCAGGCCATACCTCAGATAAGTGATAGAACGAAGCTACCAAATATAATTGATCCGGTTATCAGAAACACCATGGATTTGAGGCATCTATATCAGGTTGCTGCAGTAGCTGTCCTTTGTGTCCAGCCAGAGCCGAGCTATAGACCGCTAATCACAGATGTTCTACATTCTCTTGTTCCTCTTGTTCCTGTAGAGCTTGGGGGGACACTGAGGGTAGTAGAGCAACCCCGTCAAACGGGCTAACGAAATGGGCCCTTTTCTGAACAAGTATGATATATTCGATGGCCTGATGAAAATATTTCGCGCTACGCGTTTCCAAAGATTGTGGAAGTTTTCCCATCAAACAGGTTGGGTGCTTGAGTAGGATGACAACGATGGCTGAACTATCCTGGAGGGAAATTTTCATCTAATTGCCATTTTTGAAGACCAAAACGCTTGCCTACGAAGAGATGACAAGCTACTGCCGACATTTGTAGGGCATTCTTTAAGGGTACATCAATCTAACATTGATTTCAGAGGTAGTTTTGATTTGTTGGTGCTCTTTAACTCCTGTGTGACCATCCTGTTAGATTGTGGGGCCTAGTTCGGCGATTTCGTGTAAATTTCATCGCCGGTAGATTTGATGTAAATTCGAGTGGGTAGGCATTCATGATCATTTGTTACAGAAAACCACTTAATAGACAAAATTTATTCAGAATATTGTAGTGTTGTTGCGAGCAGTTTAATGTTTGATCTGATGATTTATGAGACATCTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU088721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGCCCAAAACGCTTGCCTACGAAGAGATGACAAGCTACTGCCGACATTTGTAGGGCATTCTTTAAGGGTACATCAATCTAACATTGATTTCAGAGGTAGTTTTGATTTGTTGGTGCTCTTTAACTCCTGTGTGACCATCCTGTTAGATTGTGGGGCCTAGTTCGGCGATTTCGTGTAAATTTCATCGCCGGTAGATTTGATGTAAATTCGAGTGGGTAGGCATTCATGATCATTTGTTACAGAAAACCACTTAATAGACAAAATTTATTCAGAAaaa                                                                                       ]




>consensus_5104#0
ACAGCGTCGCAGCGCTGGAGATCGAACCACGCAACCCAACCCGTGCTGCGAATCACACCA
CGCCCTACCAGCTGGACCGGAGATGGACCAGCCGCACCTCGCAGCCACCCCACGGCCCCC
GAGAAGAGAACCCCGCCACCGCGGGAGCGGGACCCACCCCGCCGGTGGCTGCGTCGTAGC
TGCGGCATCCACACCCAGTCAGGCAGTCACCCACTCCCACTCCCCCGCTCGAAAACCCCC
AAAACCACCCGGAGAAACAGCAGGAAGGAGAGGAAGAGAGGTGGAGGTTGCCTTTGGCTG
GCTGTGGAGAGGGTGAGACGGTGGGTGGGAAATTTCAAACTTGGCCGCCGGCGTGCTGTT
CTTGGCTCCCCGGGGCGGCGCTGAGAAGGATGGGGGTGTCCGGGAAAGGCGGTTTCTTGG
CGGTGGTGGCGGTGGTGGGGAGAGGCGCTGTCCTGCTCGCGGATGCGGCGAGGGTGGTGG
ATTTCGGCGAGGTGGGCTCGCCGCCTGCGCCGTCACCGGTGGCGGACGCGCCCTATCTCC
CTGATGTGGCGTCTCCTCCTGCAGTGCAAACTGAGGGTGGCAACAATTACCAAAAGGAGA
TCCTTGTTGCAGTCATCTTGGCACTTGCCGCAGTCATTGTAACGGTGGTATCAGCAATTT
ATGCATGGACCTTCTGGAAAAAAACTCGTCAAGCTCTGGATTCCAAGGACAAGAAACTCT
CAAGTACTACCAAGGGGCACATGCTGTTACCCATGTTTGGGAAACTGAATTCAATGAAAA
CGTCCAAGAAAGAAGTGGTTGCAATGATGGACTTTTCAGTCTTAGACTCTGCTACGGGCA
AGTTCAGTGAGAATAACATATTGGGAAAAGGAGGTTTTGGTTGTGTATATAGAGCATGTC
TTGATAGAGGGGTTGTTGCAGCTGTTAAGAAACTTAATTGTTGTAGACAAGAAGTAGAGA
AAGAATTTGAGAATGAGCTGGAGTTTCTTGGAAAAATTCGGCATCCCAACGTGATCTCCG
TGCTAGGATATTGCATTCATGAAGACACAAGGCTGCTTGTATATGAGCTGATGCAAAATG
GTTCTCTAGAAACACAATTACATGGACCTTCAAATGGATCAGCTTTAAGTTGGTACATTC
GGTTGAAAATTGCTCTTGATGCAGCAAGAGGATTGGAACACCTTCATGAGCACTGCAATC
CATTGATTATTCACAGAGATATAAAGTCGTCCAATATACTTCTTGATTCAGACTTCAATG
CAAAGATATCAGATTTTGGCCTTGCAATTTATGGTGGGAACCACAACAAAGCTGATTTAA
AGCCTTCTGGAACTGTCGGTTATGTTGCACAAGAGTATCTTCTAGATGGTCAATTAACTG
AGAAGAGTGATGTGTATGCTTTTGGGGTGGTTCTTCTCGAACTGTTACTTGGAAGGAAAC
CAGTAGAGAAGATTGGAGATTCTCACTGTCAATCCATTGTGTCATGGGTATGTTTTGCGA
TTTCCGTGCTTTGTGGTTTATGCATCTAATAGTTCTGAAAAATGTGTGATGCCTGAGGTT
TTAGCAGACTGTTATTGTGTTTCCTTATAGCAATTGATAATTGAATATGTCTTTGGATGA
ACTAATTTCATGGATATATCGTTGATGCAGTGAAATCTTAATTAGTTGAGTGCATTGATG
TGCCTCACACTTGAGATACTTTTTACATTTTCTTCACAAATATTCAGTATTTAAATTATT
TTCTTGCAGCAAATGTGTTGATAAATAAAACCTGACGTAAGTATTATATTTCAAGCTTCA
CATTGCACTGAATTAAGAATATTTGCAGCTCCCCATAGAATGAGTTAATAATGCCCATGA
CAGTATGTCAATTTAGAGCTTTGATACATCTCCTTAGTATTCAGTTTGTACTAGCAAATT
TGCACTCATCTATTTCTGCCCAATTGGCCGTTTACCCGTGGTAAAAATTCTATTAGGGCT
GGGCATATTCCACACTTCTGGTTCATGGTTATGGTAACCAAAACTTGTCCCAGTAGGCAA
ACAGACACTGACCTTGTCCGTTCACCCATCTACACTACTGACACGCGGATATTCCAAAAG
CCATTTACTGTACCTATAGCATGATGTATTGATGTTGCATTGGCTACCGAATTCTGACTT
TTCAACCTTAAATTTAAACTACGCACAAAGACTTATTATCTATACGCATCTTTTATGCTC
TTTTTTTTGGTTACCTAAGTGTTTAAATTTCTACCTTTCCAGAACGACATAGTCCTCCAT
TTCATATATCTGGTTGATTATTATCTCTTTTACTTTAGTTCATAGTTGCATGACAAACTA
ATTCCATTAGCCTTTTCTCCGTTGTAAAGTGGAATAGTCAGTAAACCACAAAGTTATCTT
CTGCAGGCCATACCTCAGATAAGTGATAGAACGAAGCTACCAAATATAATTGATCCGGTT
ATCAGAAACACCATGGATTTGAGGCATCTATATCAGGTTGCTGCAGTAGCTGTCCTTTGT
GTCCAGCCAGAGCCGAGCTATAGACCGCTAATCACAGATGTTCTACATTCTCTTGTTCCT
CTTGTTCCTGTAGAGCTTGGGGGGACACTGAGGGTAGTAGAGCAACCCCGTCAAACGGGC
TAACGAAATGGGCCCTTTTCTGAACAAGTATGATATATTCGATGGCCTGATGAAAATATT
TCGCGCTACGCGTTTCCAAAGATTGTGGAAGTTTTCCCATCAAACAGGTTGGGTGCTTGA
GTAGGATGACAACGATGGCTGAACTATCCTGGAGGGAAATTTTCATCTAATTGCCATTTT
TGAAGACCAAAACGCTTGCCTACGAAGAGATGACAAGCTACTGCCGACATTTGTAGGGCA
TTCTTTAAGGGTACATCAATCTAACATTGATTTCAGAGGTAGTTTTGATTTGTTGGTGCT
CTTTAACTCCTGTGTGACCATCCTGTTAGATTGTGGGGCCTAGTTCGGCGATTTCGTGTA
AATTTCATCGCCGGTAGATTTGATGTAAATTCGAGTGGGTAGGCATTCATGATCATTTGT
TACAGAAAACCACTTAATAGACAAAATTTATTCAGAATATTGTAGTGTTGTTGCGAGCAG
TTTAATGTTTGATCTGATGATTTATGAGACATCTTTTTTCAAAAAAAAAAAAAAAAAAAA
AAAAAAA

consensusID : consensus_5104#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence 
                              [CTCCGGTCGGGGGCTAGGGGCGCGCGCACCGCGCGCGGGTGGGCAATTGGCTGGTCTTGTGGGTGTCCCGAAACGCCTGCGGCCCCCCTCGGCGTAGTACAGCAGCGCCGTCAAAGGGCTTTCCGGAAGGGTCCCTTTTTTAAACAAGTATGGTTTTTTTGATGGCCTGATGAAAATATTTCTGCGCTACGGGGTGTTCAAAGGTTGTGGGAGTTTTTCCATCAAACAGGTTGGGGGCTTTAGTAGGATGACAACAATGGCTGGACTATTCCGGAGGGAAATTTTTATTTAATTGCCATTTTTTAAGGCCAAAACCGTTGTCTATGGAGAGATGGCAAGGTTCTGCCGACCTTTGTAGGGCCTTTTTTAAGGGTGCCTCAATTTAACCTTGATTTCAGAGGTAGTTTTGATTTGGTGGGGGTCTTTAACTCCTGGGGGACCATCCTGTTAAATTGTGGGGGCTAGTTTGGCGATTTTGTGTAAATTTTTTCGCCGGTAGATTTGATGTAAATTTGAGGGGGGAGGCCTTCATGATCATTTGGTACAGAAAACCCCTTTATAGACAAAATTTTTTCAGAATATTGTAGGGTTGTTGCGAGCAGTTTAATGTTTGATTTGATGATTTTTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760467             [CTCCGGTCGGGGGCTAGGGGCGCGCGCACCGCGCGCGGGTGGGCAATTGGCTGGTCTTGTGGGTGTCCCGAAACGCCTGCGGCCCCCCTCGGCGTAGTACAGCAGCGCCGTCAAAGGGCTTTCCGGAAGGGTCCCTTTTTTAAACAAGTATGGTTTTTTTGATGGCCTGATGAAAATATTTCTGCGCTACGGGGTGTTCAAAGGTTGTGGGAGTTTTTCCATCAAACAGGTTGGGGGCTTTAGTAGGATGACAACAATGGCTGGACTATTCCGGAGGGAAATTTTTATTTAATTGCCATTTTTTAAGGCCAAAACCGTTGTCTATGGAGAGATGGCAAGGTTCTGCCGACCTTTGTAGGGCCTTTTTTAAGGGTGCCTCAATTTAACCTTGATTTCAGAGGTAGTTTTGATTTGGTGGGGGTCTTTAACTCCTGGGGGACCATCCTGTTAAATTGTGGGGGCTAGTTTGGCGATTTTGTGTAAATTTTTTCGCCGGTAGATTTGATGTAAATTTGAGGGGGGAGGCCTTCATGATCATTTGGTACAGAAAACCCCTTTATAGACAAAATTTTTTCAGAATATTGTAGGGTTGTTGCGAGCAGTTTAATGTTTGATTTGATGATTTTTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_5104#1
CTCCGGTCGGGGGCTAGGGGCGCGCGCACCGCGCGCGGGTGGGCAATTGGCTGGTCTTGT
GGGTGTCCCGAAACGCCTGCGGCCCCCCTCGGCGTAGTACAGCAGCGCCGTCAAAGGGCT
TTCCGGAAGGGTCCCTTTTTTAAACAAGTATGGTTTTTTTGATGGCCTGATGAAAATATT
TCTGCGCTACGGGGTGTTCAAAGGTTGTGGGAGTTTTTCCATCAAACAGGTTGGGGGCTT
TAGTAGGATGACAACAATGGCTGGACTATTCCGGAGGGAAATTTTTATTTAATTGCCATT
TTTTAAGGCCAAAACCGTTGTCTATGGAGAGATGGCAAGGTTCTGCCGACCTTTGTAGGG
CCTTTTTTAAGGGTGCCTCAATTTAACCTTGATTTCAGAGGTAGTTTTGATTTGGTGGGG
GTCTTTAACTCCTGGGGGACCATCCTGTTAAATTGTGGGGGCTAGTTTGGCGATTTTGTG
TAAATTTTTTCGCCGGTAGATTTGATGTAAATTTGAGGGGGGAGGCCTTCATGATCATTT
GGTACAGAAAACCCCTTTATAGACAAAATTTTTTCAGAATATTGTAGGGTTGTTGCGAGC
AGTTTAATGTTTGATTTGATGATTTTTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5104#0      ACAGCGTCGCAGCGCTGGAGATCGAACCACGCAACCCAACCCGTGCTGCGAATCACACCA 60
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CGCCCTACCAGCTGGACCGGAGATGGACCAGCCGCACCTCGCAGCCACCCCACGGCCCCC 120
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      GAGAAGAGAACCCCGCCACCGCGGGAGCGGGACCCACCCCGCCGGTGGCTGCGTCGTAGC 180
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TGCGGCATCCACACCCAGTCAGGCAGTCACCCACTCCCACTCCCCCGCTCGAAAACCCCC 240
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      AAAACCACCCGGAGAAACAGCAGGAAGGAGAGGAAGAGAGGTGGAGGTTGCCTTTGGCTG 300
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      GCTGTGGAGAGGGTGAGACGGTGGGTGGGAAATTTCAAACTTGGCCGCCGGCGTGCTGTT 360
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CTTGGCTCCCCGGGGCGGCGCTGAGAAGGATGGGGGTGTCCGGGAAAGGCGGTTTCTTGG 420
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CGGTGGTGGCGGTGGTGGGGAGAGGCGCTGTCCTGCTCGCGGATGCGGCGAGGGTGGTGG 480
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      ATTTCGGCGAGGTGGGCTCGCCGCCTGCGCCGTCACCGGTGGCGGACGCGCCCTATCTCC 540
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CTGATGTGGCGTCTCCTCCTGCAGTGCAAACTGAGGGTGGCAACAATTACCAAAAGGAGA 600
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TCCTTGTTGCAGTCATCTTGGCACTTGCCGCAGTCATTGTAACGGTGGTATCAGCAATTT 660
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      ATGCATGGACCTTCTGGAAAAAAACTCGTCAAGCTCTGGATTCCAAGGACAAGAAACTCT 720
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CAAGTACTACCAAGGGGCACATGCTGTTACCCATGTTTGGGAAACTGAATTCAATGAAAA 780
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CGTCCAAGAAAGAAGTGGTTGCAATGATGGACTTTTCAGTCTTAGACTCTGCTACGGGCA 840
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      AGTTCAGTGAGAATAACATATTGGGAAAAGGAGGTTTTGGTTGTGTATATAGAGCATGTC 900
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTGATAGAGGGGTTGTTGCAGCTGTTAAGAAACTTAATTGTTGTAGACAAGAAGTAGAGA 960
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      AAGAATTTGAGAATGAGCTGGAGTTTCTTGGAAAAATTCGGCATCCCAACGTGATCTCCG 1020
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TGCTAGGATATTGCATTCATGAAGACACAAGGCTGCTTGTATATGAGCTGATGCAAAATG 1080
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      GTTCTCTAGAAACACAATTACATGGACCTTCAAATGGATCAGCTTTAAGTTGGTACATTC 1140
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      GGTTGAAAATTGCTCTTGATGCAGCAAGAGGATTGGAACACCTTCATGAGCACTGCAATC 1200
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CATTGATTATTCACAGAGATATAAAGTCGTCCAATATACTTCTTGATTCAGACTTCAATG 1260
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CAAAGATATCAGATTTTGGCCTTGCAATTTATGGTGGGAACCACAACAAAGCTGATTTAA 1320
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      AGCCTTCTGGAACTGTCGGTTATGTTGCACAAGAGTATCTTCTAGATGGTCAATTAACTG 1380
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      AGAAGAGTGATGTGTATGCTTTTGGGGTGGTTCTTCTCGAACTGTTACTTGGAAGGAAAC 1440
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CAGTAGAGAAGATTGGAGATTCTCACTGTCAATCCATTGTGTCATGGGTATGTTTTGCGA 1500
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTTCCGTGCTTTGTGGTTTATGCATCTAATAGTTCTGAAAAATGTGTGATGCCTGAGGTT 1560
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTAGCAGACTGTTATTGTGTTTCCTTATAGCAATTGATAATTGAATATGTCTTTGGATGA 1620
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      ACTAATTTCATGGATATATCGTTGATGCAGTGAAATCTTAATTAGTTGAGTGCATTGATG 1680
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TGCCTCACACTTGAGATACTTTTTACATTTTCTTCACAAATATTCAGTATTTAAATTATT 1740
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTCTTGCAGCAAATGTGTTGATAAATAAAACCTGACGTAAGTATTATATTTCAAGCTTCA 1800
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CATTGCACTGAATTAAGAATATTTGCAGCTCCCCATAGAATGAGTTAATAATGCCCATGA 1860
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CAGTATGTCAATTTAGAGCTTTGATACATCTCCTTAGTATTCAGTTTGTACTAGCAAATT 1920
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TGCACTCATCTATTTCTGCCCAATTGGCCGTTTACCCGTGGTAAAAATTCTATTAGGGCT 1980
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      GGGCATATTCCACACTTCTGGTTCATGGTTATGGTAACCAAAACTTGTCCCAGTAGGCAA 2040
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      ACAGACACTGACCTTGTCCGTTCACCCATCTACACTACTGACACGCGGATATTCCAAAAG 2100
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CCATTTACTGTACCTATAGCATGATGTATTGATGTTGCATTGGCTACCGAATTCTGACTT 2160
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTCAACCTTAAATTTAAACTACGCACAAAGACTTATTATCTATACGCATCTTTTATGCTC 2220
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTTTTTTTGGTTACCTAAGTGTTTAAATTTCTACCTTTCCAGAACGACATAGTCCTCCAT 2280
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      TTCATATATCTGGTTGATTATTATCTCTTTTACTTTAGTTCATAGTTGCATGACAAACTA 2340
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      ATTCCATTAGCCTTTTCTCCGTTGTAAAGTGGAATAGTCAGTAAACCACAAAGTTATCTT 2400
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      CTGCAGGCCATACCTCAGATAAGTGATAGAACGAAGCTACCAAATATAATTGATCCGGTT 2460
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      ATCAGAAACACCATGGATTTGAGGCATCTATATCAGGTTGCTGCAGTAGCTGTCCTTTGT 2520
consensus_5104#1      ------------------------------------------------------------
                                                                                  

consensus_5104#0      GTCCAGCCAGAGCCGAGCTATAGAC-CGCTAATCACAGATGTTCTACATTCTCTTGTTCC 2579
consensus_5104#1      CTCCGGTCGGGGGCTAGGGGCGCGCGCACCGCGCGCGGGTGGGCAATTGGCTGGTCTTGT 60
                       *** * * * * * **       * * *    * * * **  * *    **  * **  

consensus_5104#0      TCTTGTTCCTGTAGAGCTTGGGGGGACACTGAGGGTAGTAGAGCAACCCCGTCAAACGGG 2639
consensus_5104#1      GGGTGT-CCCGAAACGCCTGCGGCCCCCCTCGGCGTAGTACAGCAGCGCCGTCAAAGGGC 119
                         *** ** * *  ** ** **   * **  * ****** **** * ******** ** 

consensus_5104#0      CTAACGAAATGGGCCCTTTTCTGAACAAGTATGATATATTCGATGGCCTGATGAAAATAT 2699
consensus_5104#1      TTTCCGGAAGGGTCCCTTTTTTAAACAAGTATGGTTTTTTTGATGGCCTGATGAAAATAT 179
                       *  ** ** ** ******* * ********** * * ** *******************

consensus_5104#0      TTC-GCGCTACGCGTT-TCCAAAGATTGTGGAAGTTTTCCCATCAAACAGGTTGGGTGCT 2757
consensus_5104#1      TTCTGCGCTACGGGGTGTTCAAAGGTTGTGGGAGTTTTTCCATCAAACAGGTTGGGGGCT 239
                      *** ******** * * * ***** ****** ****** ***************** ***

consensus_5104#0      TGAGTAGGATGACAACGATGGCTGAACTATCCTGGAGGGAAATTTTCATCTAATTGCCAT 2817
consensus_5104#1      TTAGTAGGATGACAACAATGGCTGGACTATTCCGGAGGGAAATTTTTATTTAATTGCCAT 299
                      * ************** ******* ***** * ************* ** **********

consensus_5104#0      TTTTGAAGACCAAAACGCTTGCCTACGAAGAGATGACAAGCTACTGCCGACATTTGTAGG 2877
consensus_5104#1      TTTTTAAGGCCAAAACCGTTGTCTATGGAGAGATGGCAAGGTTCTGCCGACCTTTGTAGG 359
                      **** *** *******  *** *** * ******* **** * ******** ********

consensus_5104#0      GCATTCTTTAAGGGTACATCAATCTAACATTGATTTCAGAGGTAGTTTTGATTTGTTGGT 2937
consensus_5104#1      GCCTTTTTTAAGGGTGCCTCAATTTAACCTTGATTTCAGAGGTAGTTTTGATTTGGTGGG 419
                      ** ** ********* * ***** **** ************************** *** 

consensus_5104#0      GCTCTTTAACTCCTGTGTGACCATCCTGTTAGATTGTGGGGCCTAGTTCGGCGATTTCGT 2997
consensus_5104#1      GGTCTTTAACTCCTGGGGGACCATCCTGTTAAATTGTGGGGGCTAGTTTGGCGATTTTGT 479
                      * ************* * ************* ********* ****** ******** **

consensus_5104#0      GTAAATTTCATCGCCGGTAGATTTGATGTAAATTCGAGTGGGTAGGCATTCATGATCATT 3057
consensus_5104#1      GTAAATTTTTTCGCCGGTAGATTTGATGTAAATTTGAGGGGGGAGGCCTTCATGATCATT 539
                      ********  ************************ *** *** **** ************

consensus_5104#0      TGTTACAGAAAACCACTTAATAGACAAAATTTATTCAGAATATTGTAGTGTTGTTGCGAG 3117
consensus_5104#1      TGGTACAGAAAACCCCTTTATAGACAAAATTTTTTCAGAATATTGTAGGGTTGTTGCGAG 599
                      ** *********** *** ************* *************** ***********

consensus_5104#0      CAGTTTAATGTTTGATCTGATGATTTATGAGACATCTTTTTTCAAAAAAAAAAAAAAAAA 3177
consensus_5104#1      CAGTTTAATGTTTGATTTGATGATTTTTGAGAAAAAAA-----AAAAAAAAAAAAAAAAA 654
                      **************** ********* ***** *         *****************

consensus_5104#0      AAAAAAAAAA 3187
consensus_5104#1      AAAAAAAAAA 664
                      **********


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)