cluster # 5105

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Oryza sativa
cluster # 5105 cluster # 5105 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5105#0 length = 1223 sequences # 3
consensusID : consensus_5105#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1223
fasta sequence
                              [CTGAATCAGCACACTCCTACTTGCAGCTAGAGCTGAGCAAGCCAAAGCTTTTTATCACTCTTGGTGGTGTTCTTAGTAGAGCTTTTCGCAAAGATTGTGCCATGGATCTTCGGCGAGTTCATTGCTTGGGTTGGCTCCTTGTTCTACTCCTCTTCAGCCATGAAGCTGCAGGGGGAGGAGGAGCAGAGCAGGTAGCAACACAAGCGCATCACGACGCGTCGCGGCGG-CTCTCCGCGCAGGTGGCGCACGGCACGCCGGAGCGGGACGTGACCTCGCCGCTCGCCACTGTCCCGGTGGATAACCCGGCGGCGAACCCCACCGTGACGTCGACGACGAACCCGGCGGCAATGCCGGGGACGCAGACGACGCCGTCGCTGGCGAACCCGGTGGCCGCGGGCGGCGGCGGCGGCGGCGGAGGCGGGAGCTGGTGCGTGGCGAGCCCGAGCGCGAGCACGGCGGCGCTGCAGGTGGCGCTGGACTACGCGTGCGGGCAGGGCGGCGTGGACTGCTCCGCCATCCAGTCCGGCGGCGGCTGCTTCAACCCCAACACCGTTCGCGACCACGCGTCGTTCGCCTTCAACAGCTACTACCAGAAGAACCCCGTCCAGACCAGCTACGACTTCGCCGGCACCGCCATCCTCACCAGCACCGATCCCAATCCATTCACCTCTCGTTGCAATTCTGCAGGCTCCTCATCGTGCAAGTACCCATCGACGAGCACCGGTGCTTCGGTTCTGAACACGTCGACGCCGACGAACCCAGCTTTCGGTGGCTACGACAACTCTCCTCCTGGATTCGGCAACAACTCCCCTCCGCTGTACGGGTCCATGTCGCCTCCGGGTTACAACGACAACATCGGCGCCGCCGCGGCCATGGCCGGCAGCAAGGAAACACTCCTGTCGCTGGCGTGCGTCGTCGCAACGGTTTCTCTGAACCTGTACAAGTGAGAATCCAAGCTGCTGTTTCACGATTCAAATCTGTAGAAACTGCACGGCTTTGGTGGATGTTTTGGTACTCGCACAGTTGCCCTGATGCAAGCAGAAAGCAGAGAAATGAATGTGCAGAATATGTTTTGGTCAGATGAGCTAGGAGAAGCAGGCCGGCAAGATTGATAGATAGATCGACTTCTCCTAGCTGTAGAAATAGTAGCATGTGGTGCTGTATGTAGTTACTAGTAGTAATCAGTAAGAACATTGAGCTGAACTTTTGCGTTCACCTAAAAA]

[+] EMBL AK109090             [CTGAATCAGCACACTCCTACTTGCAGCTAGAGCTGAGCAAGCCAAAGCTTTTTATCACTCTTGGTGGTGTTCTTAGTAGAGCTTTTCGCAAAGATTGTGCCATGGATCTTCGGCGAGTTCATTGCTTGGGTTGGCTCCTTGTTCTACTCCTCTTCAGCCATGAAGCTGCAGGGGGAGGAGGAGCAGAGCAGGTAGCAACACAAGCGCATCACGACGCGTCGCGGCGG CTCTCCGCGCAGGTGGCGCACGGCACGCCGGAGCGGGACGTGACCTCGCCGCTCGCCACTGTCCCGGTGGATAACCCGGCGGCGAACCCCACCGTGACGTCGACGACGAACCCGGCGGCAATGCCGGGGACGCAGACGACGCCGTCGCTGGCGAACCCGGTGGCCGCGGGCGGCGGCGGCGGCGGCGGAGGCGGGAGCTGGTGCGTGGCGAGCCCGAGCGCGAGCACGGCGGCGCTGCAGGTGGCGCTGGACTACGCGTGCGGGCAGGGCGGCGTGGACTGCTCCGCCATCCAGTCCGGCGGCGGCTGCTTCAACCCCAACACCGTTCGCGACCACGCGTCGTTCGCCTTCAACAGCTACTACCAGAAGAACCCCGTCCAGACCAGCTACGACTTCGCCGGCACCGCCATCCTCACCAGCACCGATCCCAATCCATTCACCTCTCGTTGCAATTCTGCAGGCTCCTCATCGTGCAAGTACCCATCGACGAGCACCGGTGCTTCGGTTCTGAACACGTCGACGCCGACGAACCCAGCTTTCGGTGGCTACGACAACTCTCCTCCTGGATTCGGCAACAACTCCCCTCCGCTGTACGGGTCCATGTCGCCTCCGGGTTACAACGACAACATCGGCGCCGCCGCGGCCATGGCCGGCAGCAAGGAAACACTCCTGTCGCTGGCGTGCGTCGTCGCAACGGTTTCTCTGAACCTGTACAAGTGAGAATCCAAGCTGCTGTTTCACGATTCAAATCTGTAGAAACTGCACGGCTTTGGTGGATGTTTTGGTACTCGCACAGTTGCCCTGATGCAAGCAGAAAGCAGAGAAATGAATGTGCAGAATATGTTTTGGTCAGATGAGCTAGGAGAAGCAGGCCGGCAAGATTGATAGATAGATCGACTTCTCCTAGCTGTAGAAATAGTAGCATGTGGTGCTGTATGTAGTTACTAGTAGTAATCAGTAAGAACATTGAGCTGAACTTTTGCGTTC         ]
[+] EMBL C72877               [                CTACTTGCAGCTAGAGCTGAGCAAGCCAAAGCTTTTTATCACTCTTGGTGGTGTTCTTAGTAGAGCTTTTCGCAAAGATTGTGCCATGGATCTTTGGCGAGTTCATTGCTTGGGTTGGCTCCTTGTTCTACTCCTCTTCAGCCAT         GGGGGAGGAGGAGCAGAGCAGGTAGCAACACAAGCGCATCACGACGCGTCGCGGCGGACTCTCCGCGCAGGTGGCGCACGGCACGCCGGAGCGGGACGTGACCTCGCCGCTCGCCACTGTCCCGGTGGATAACCCGGCGGCGAACCCCACNGTGACGTCGACGACGAACCCGGCGGCAATGCCGGGGANGCAGACGACGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU172538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTCTCCTCCTGGATTCGGCAACAACTCCCCTCCGCTGTACGGGTCCATGTCGCCTCCGGGTTACAACGACAACATCGGCGCCGCCGCGGCCATGGCCGGCAGCAAGGAAACACTCCTGTCGCTGGCGTGCGTCGTCGCAACGGTTTCTCTGAACCTGTACAAGTGAGAATCCAAGCTGCTGTTTCACGATTCAAATCTGTAGAAACTGCACGGCTTTGGTGGATGTTTTGGTACTCGCACAGTTGCCCTGATGCAAGCAGAAAGCAGAGAAATGAATGTGCAGAATATGTTTTGGTCAGATGAGCTAGGAGAAGCAGGCCGGCAAGATTGATAGATAGATCGACTTCTCCTAGCTGTAGAAATAGTAGCATGTGGTGCTGTATGTAGTTACTAGTAGTAATCAGTAAGAACATTGAGCTGAACTTTTGCGTTCACCTAAAAA]




>consensus_5105#0
CTGAATCAGCACACTCCTACTTGCAGCTAGAGCTGAGCAAGCCAAAGCTTTTTATCACTC
TTGGTGGTGTTCTTAGTAGAGCTTTTCGCAAAGATTGTGCCATGGATCTTCGGCGAGTTC
ATTGCTTGGGTTGGCTCCTTGTTCTACTCCTCTTCAGCCATGAAGCTGCAGGGGGAGGAG
GAGCAGAGCAGGTAGCAACACAAGCGCATCACGACGCGTCGCGGCGGCTCTCCGCGCAGG
TGGCGCACGGCACGCCGGAGCGGGACGTGACCTCGCCGCTCGCCACTGTCCCGGTGGATA
ACCCGGCGGCGAACCCCACCGTGACGTCGACGACGAACCCGGCGGCAATGCCGGGGACGC
AGACGACGCCGTCGCTGGCGAACCCGGTGGCCGCGGGCGGCGGCGGCGGCGGCGGAGGCG
GGAGCTGGTGCGTGGCGAGCCCGAGCGCGAGCACGGCGGCGCTGCAGGTGGCGCTGGACT
ACGCGTGCGGGCAGGGCGGCGTGGACTGCTCCGCCATCCAGTCCGGCGGCGGCTGCTTCA
ACCCCAACACCGTTCGCGACCACGCGTCGTTCGCCTTCAACAGCTACTACCAGAAGAACC
CCGTCCAGACCAGCTACGACTTCGCCGGCACCGCCATCCTCACCAGCACCGATCCCAATC
CATTCACCTCTCGTTGCAATTCTGCAGGCTCCTCATCGTGCAAGTACCCATCGACGAGCA
CCGGTGCTTCGGTTCTGAACACGTCGACGCCGACGAACCCAGCTTTCGGTGGCTACGACA
ACTCTCCTCCTGGATTCGGCAACAACTCCCCTCCGCTGTACGGGTCCATGTCGCCTCCGG
GTTACAACGACAACATCGGCGCCGCCGCGGCCATGGCCGGCAGCAAGGAAACACTCCTGT
CGCTGGCGTGCGTCGTCGCAACGGTTTCTCTGAACCTGTACAAGTGAGAATCCAAGCTGC
TGTTTCACGATTCAAATCTGTAGAAACTGCACGGCTTTGGTGGATGTTTTGGTACTCGCA
CAGTTGCCCTGATGCAAGCAGAAAGCAGAGAAATGAATGTGCAGAATATGTTTTGGTCAG
ATGAGCTAGGAGAAGCAGGCCGGCAAGATTGATAGATAGATCGACTTCTCCTAGCTGTAG
AAATAGTAGCATGTGGTGCTGTATGTAGTTACTAGTAGTAATCAGTAAGAACATTGAGCT
GAACTTTTGCGTTCACCTAAAAA
clustalw multiple alignements is not computed in this case