cluster # 5133

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Oryza sativa
cluster # 5133 cluster # 5133 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5133#0 length = 657 sequences # 3

consensusID : consensus_5133#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 657
fasta sequence

                              [TAAAATTTTGCTACTGAACCCTGAAGGCTATTATTTTTTGGGTCTGTTTTGTGAACAGTGCACAAAAGACACTACGGCTGAACAATATGTTTGGTGCTTTTCAGGCTGCTGATGAGGTCAAATACATGAAGGATGCAAAGGCTGATCGCCTGAGGCAGCTCCAGGAACTTCATTCCAAAATTGATGAGAGCTTAATTGAAGATATAGAACAACTGCAAAGCTTTGAGGATGACATACAGTTTGCTAAGTCTGCTGCCATTTCTGTGGACGACAGTAGAAAAGCAGCTCTCCAGCTTGCATTTGATGAGGATCAGCAAATAATTGCAGACAAATGGATACATATTTTTCGTGCTTTGAGTGAGGAAAGAGGACCATGGTCTGCTAACCCATTTCCAAATAGTACTGTGACGTACTGGAAACTTGACAAGACAGAAGATAAATGGCGGCGACGACTGAAACTCAAG-CGTAACTATAAGTTTGATGAACGCCTTTGTCAGCCACCAT-CCAAATTTAGTAATGAAAGCAATGCCTCGTCTGTCAACCCCTCTGTTAGTGCCAAAATTCCAGAAAAAATGAAGCACTTACTTCTGA-AAGGAGTTCGTG-GAATT-CAGGGGATGTTAGTTCTGAACCTTGCGAGGATAACAATGACATGAGTGA]

[+] EMBL CF307135             [TAAAATTTTGCTACTGAACCCTGAAGGCTATTATTTTTTGGGTCTGTTTTGTGAACAGTGCACAAAAGACACTACGGCTGAACAATATGTTTGGTGCTTTTCAGGCTGCTGATGAGGTCAAATACATGAAGGATGCAAAGGCTGATCGCCTGAGGCAGCTCCAGGAACTTCATTCCAAAATTGATGAGAGCTTAATTGAAGATATAGAACAACTGCAAAGCTTTGAGGATGACATACAGTTTGCTAAGTCTGCTGCCATTTCTGTGGACGACAGTAGAAAAGCAGCTCTCCAGCTTGCATTTGATGAGGATCAGCAAATAATTGCAGACAAATGGATACATATTTTTCGTGCTTTGAGTGAGGAAAGAGGACCATGGTCTGCTAACCCATTTCCAAATAGTACTGTGACGTACTGGAAACTTGACAAGACAGAAGATAAATGGCGGCGACGACTGAAACTCAAG CGTAACTATAAGTTTGATGAACGCCTTTGTCAGCCACCAT CCAAATTTAGTAATGAAAGCAATGCCTCGTCTGTCAACCCCTCTGTTAGTGCCAAAATTCCAGAAAAAATGAAGCACTTACTTCTGA AAGGAGTTCGTG GAATT CAGGGGATGTTAGTTCTGAACCTTGCGAGGATAACAATGA         ]
[+] EMBL OSC5941              [                                                                                                                               nAAGGATGCAAAGGCTGATCGCCTGAGGCAGCTCCAGGAACTTCATTCCAAAATTNATGNGAGCTTAATTGAAGATATAGANCAACTGCAAAGCTTTGAGGATGACATACAGTTTGCTAAGTNTGNTGCCATTTCTGTGGACGACAGTAGAAAAGCAGCTCTCCAGCTTGCATTTNATGAGGATCAGCAAATAATTGCAGACAAAT                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF306376             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGAAACTCAAGTCGTAACTATAAGTTTGATGAACGCCTTTGTCAG CACCATGCCAAATTTAGTAATGAAAGCAATGCCTAGTATGTCAACCCCTCTGTTAGTGCCAAAATTGCAGAAAAAATGAAGCACTTACTTCTGATATGGAGTTCGTGTGAATTACAGGGGATGTTAGTTCTGAACCTTGCGAGGATAACAATGACATGAGTGA]




>consensus_5133#0
TAAAATTTTGCTACTGAACCCTGAAGGCTATTATTTTTTGGGTCTGTTTTGTGAACAGTG
CACAAAAGACACTACGGCTGAACAATATGTTTGGTGCTTTTCAGGCTGCTGATGAGGTCA
AATACATGAAGGATGCAAAGGCTGATCGCCTGAGGCAGCTCCAGGAACTTCATTCCAAAA
TTGATGAGAGCTTAATTGAAGATATAGAACAACTGCAAAGCTTTGAGGATGACATACAGT
TTGCTAAGTCTGCTGCCATTTCTGTGGACGACAGTAGAAAAGCAGCTCTCCAGCTTGCAT
TTGATGAGGATCAGCAAATAATTGCAGACAAATGGATACATATTTTTCGTGCTTTGAGTG
AGGAAAGAGGACCATGGTCTGCTAACCCATTTCCAAATAGTACTGTGACGTACTGGAAAC
TTGACAAGACAGAAGATAAATGGCGGCGACGACTGAAACTCAAGCGTAACTATAAGTTTG
ATGAACGCCTTTGTCAGCCACCATCCAAATTTAGTAATGAAAGCAATGCCTCGTCTGTCA
ACCCCTCTGTTAGTGCCAAAATTCCAGAAAAAATGAAGCACTTACTTCTGAAAGGAGTTC
GTGGAATTCAGGGGATGTTAGTTCTGAACCTTGCGAGGATAACAATGACATGAGTGA

clustalw multiple alignements is not computed in this case