cluster # 5138

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Oryza sativa
cluster # 5138 cluster # 5138 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5138#0 length = 796 sequences # 3

consensusID : consensus_5138#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 796
fasta sequence

                              [TGCAGAGCAAAACCACCACCAATCACTGCCTCCGATCCGACTGGATCAGGTAATCGAGCCGAGGGAACCCGCGAGATCGGATTCTGACGATGTTCTTCTTCTTCGTGGGGGGC-GTGGAGCAGGGCGC-GGGGCGGGTGCTGAAGGAGGCGGCGCGGCGGTGCCTCCGCTGCGGCGGCGC-GGCC-GACCTGGTGGAGACCGAGAAGGTGCTCAAGCTCTTCTTCGTCCCCGTCAAGCGGTGGCCCGGGAAGGACCCCGCCTACCTCTGCCGCGAGTGCGGCCTCCT-CGGGCCTGGATCCCTCGGCGGCGGCGGCGGCGAGGCCGGGACGGGGCCGCCGCTCCTCCCCCGCGACGCGCGGTGCGGCGCGTGCAACCGCGCCGTCGCCGACCCGCAGTTCCGGTTCTGCCCCTTCTGCGGCTCCGCGCTGTGATCCCGACCGACGCAGCCGGCGATGGATTTCTCTTTGACGGTATGACTCCTTGCTTTTTATTTCTAGCAGTAAGCATTTTGGTTGCGTGATGAGTGTAGATGTAAAACGAGCTCCTTGTAAACTACTGACAAGAAGATTAGCAAAATAAGTAATCAAGTGAAGTCTACTCGCGCATCATATGTTTATGTCGTTAATCATCACATTGCTTGACGATGCCTGCAGCGGTGCAGCCTGCTCATGTTTCTGGCATCAATGCATTGTCCATATTACGCATGTAATTGTCAGGTAAATCTTAAATGTCTTACTAGTACTGTATAACAGTATAACTTTACCATTTGCACTGATACAGTCTGAAATACAAGTAACAT]

[+] EMBL AK109595             [TGCAGAGCAAAACCACCACCAATCACTGCCTCCGATCCGACTGGATCAGGTAATCGAGCCGAGGGAACCCGCGAGATCGGATTCTGACGATGTTCTTCTTCTTCGTGGGGGGC GTGGAGCAGGGCGC GGGGCGGGTGCTGAAGGAGGCGGCGCGGCGGTGCCTCCGCTGCGGCGGCGC GGCC GACCTGGTGGAGACCGAGAAGGTGCTCAAGCTCTTCTTCGTCCCCGTCAAGCGGTGGCCCGGGAAGGACCCCGCCTACCTCTGCCGCGAGTGCGGCCTCCT CGGGCCTGGATCCCTCGGCGGCGGCGGCGGCGAGGCCGGGACGGGGCCGCCGCTCCTCCCCCGCGACGCGCGGTGCGGCGCGTGCAACCGCGCCGTCGCCGACCCGCAGTTCCGGTTCTGCCCCTTCTGCGGCTCCGCGCTGTGATCCCGACCGACGCAGCCGGCGATGGATTTCTCTTTGACGGTATGACTCCTTGCTTTTTATTTCTAGCAGTAAGCATTTTGGTTGCGTGATGAGTGTAGATGTAAAACGAGCTCCTTGTAAACTACTGACAAGAAGATTAGCAAAATAAGTAATCAAGTGAAGTCTACTCGCGCATCATATGTTTATGTCGTTAATCATCACATTGCTTGACGATGCCTGCAGCGGTGCAGCCTGCTCATGTTTCTGGCATCAATGCATTGTCCATATTACGCATGTAATTGTCAGGTAAATCTTAAATGTCTTACTAGTACTGTATAACAGTATAACTTTACCATTTGCACTGATACAGTCTGAAATACAAGTAACAT]
[+] EMBL AU172648             [                                                                      GCGAGATCGGATTCTGACGATGTTCTTCTTCTTCGTGGGGGGCAGTGGAGCAGGGCGCAGGGGCGGGTGCTGAAGGAGGCGGCGCGGCGGTGCCTCCGCTGCGGCGGCGCAGGCCAGACCTGGTGGAGACCGAGAAGGTGCTCAAGCTCTTNTTCGTCCCCGTCAAGCGGTGGCCCGGGAAGGACCCCGCCTACCTCTGNCGNGAGTGCGGCCTNCTACGGGCCTGNATCCCTTGGag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU172649             [                                                                                                                                                            GCGGTGCCTCCGCTGCGGCGGCGC GGCC GACCTGGTGGAGACCGAGAAGGTGCTCAAGCTCTTCTTCGTCCCCGTCAAGCGGTGGCCCGGGAAGGACCCCGCCTACCTCTGCCGCGAGTGCGGCCTCCT CGGGCCTGGATCCCTCGGCGGCGGCGGCGGCGAGGCCGGGACGGGGCCGCCGCTCCTCCCCCGCGACGCGCGGTGCGGCGCGTGCAACCGCGCCGTCGCCGACCCGCAGTTCCGGTTCTGCCCCTTCTGCGGCTCCGCGCTGTGATCCCGACCGACGCAGCCGGCGATGGATTTCTCTTTGACGGTATGACTCCTTGCTTTTTATTTCTAGCAGTAAGCATTTTGGTTGCGTGATGAGTGTAGATGTAAAACGAGCTCCTTGTAAACTACTGACAAGAAGATTAGCAAAATAAGTAATCAAaaaa                                                                                                                                                                                                                ]




>consensus_5138#0
TGCAGAGCAAAACCACCACCAATCACTGCCTCCGATCCGACTGGATCAGGTAATCGAGCC
GAGGGAACCCGCGAGATCGGATTCTGACGATGTTCTTCTTCTTCGTGGGGGGCGTGGAGC
AGGGCGCGGGGCGGGTGCTGAAGGAGGCGGCGCGGCGGTGCCTCCGCTGCGGCGGCGCGG
CCGACCTGGTGGAGACCGAGAAGGTGCTCAAGCTCTTCTTCGTCCCCGTCAAGCGGTGGC
CCGGGAAGGACCCCGCCTACCTCTGCCGCGAGTGCGGCCTCCTCGGGCCTGGATCCCTCG
GCGGCGGCGGCGGCGAGGCCGGGACGGGGCCGCCGCTCCTCCCCCGCGACGCGCGGTGCG
GCGCGTGCAACCGCGCCGTCGCCGACCCGCAGTTCCGGTTCTGCCCCTTCTGCGGCTCCG
CGCTGTGATCCCGACCGACGCAGCCGGCGATGGATTTCTCTTTGACGGTATGACTCCTTG
CTTTTTATTTCTAGCAGTAAGCATTTTGGTTGCGTGATGAGTGTAGATGTAAAACGAGCT
CCTTGTAAACTACTGACAAGAAGATTAGCAAAATAAGTAATCAAGTGAAGTCTACTCGCG
CATCATATGTTTATGTCGTTAATCATCACATTGCTTGACGATGCCTGCAGCGGTGCAGCC
TGCTCATGTTTCTGGCATCAATGCATTGTCCATATTACGCATGTAATTGTCAGGTAAATC
TTAAATGTCTTACTAGTACTGTATAACAGTATAACTTTACCATTTGCACTGATACAGTCT
GAAATACAAGTAACAT

clustalw multiple alignements is not computed in this case