cluster # 5149

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Oryza sativa
cluster # 5149 cluster # 5149 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5149#0 length = 642 sequences # 3

consensusID : consensus_5149#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 642
fasta sequence

                              [CATCGGCATCTTCTCACACTCTAGCTCACAGCTTCGCGGTTTCCACGCACTTGAAAACTCACGTTTCCAAGCCGGAAAACCATGGCTCGCTTCGCCGTAGTCGCCGCCATCGTCGCCCTCCTCGCGGTCACGGCCGCCGCGCAGGCCCCGGGAGCGGCCCCCGTCCCGGCGCCCAAGATGGCCCCGCTGCCCGCTCCCCCGGCGAGGTCCCCGGCCACCGCCCCCGCGCCGGTCGCCACCCCGCCCACCGCCGCGTCGCCGTCCCCCATGGCGTCTCCACCGGCCCCGCCCACTGACGCCCCCGCCGCCAATGCCCCCTCCGCCGTCACCCCGTCCGCGGTCACCCCCTCCTCCGTCTCCGCCCCGACCGGCGCCCCCGCTGCCTCCTCCACGTACACCGCCACCGCCAGCTTCGTTGCCGTCGCCGGCGCGGTCGCCGCCGCCATCGTGTTCTAGATGGATGGATGGATGATTTGATCGACGCGTTGTTTATACGGCGAGATTCTTTTTTGTGATTCTGTTCTATTTACAGACAGCGAGACACTGATATTCAGATGTTTACACTTGTCATGTTTGATGAGATGATTATCGATGGAATATATTCTTTCATTTATTATTACCAAAAAAAAAANNNNNANNNAA]

[+] EMBL AK107983             [CATCGGCATCTTCTCACACTCTAGCTCACAGCTTCGCGGTTTCCACGCACTTGAAAACTCACGTTTCCAAGCCGGAAAACCATGGCTCGCTTCGCCGTAGTCGCCGCCATCGTCGCCCTCCTCGCGGTCACGGCCGCCGCGCAGGCCCCGGGAGCGGCCCCCGTCCCGGCGCCCAAGATGGCCCCGCTGCCCGCTCCCCCGGCGAGGTCCCCGGCCACCGCCCCCGCGCCGGTCGCCACCCCGCCCACCGCCGCGTCGCCGTCCCCCATGGCGTCTCCACCGGCCCCGCCCACTGACGCCCCCGCCGCCAATGCCCCCTCCGCCGTCACCCCGTCCGCGGTCACCCCCTCCTCCGTCTCCGCCCCGACCGGCGCCCCCGCTGCCTCCTCCACGTACACCGCCACCGCCAGCTTCGTTGCCGTCGCCGGCGCGGTCGCCGCCGCCATCGTGTTCTAGATGGATGGATGGATGATTTGATCGACGCGTTGTTTATACGGCGAGATTCTTTTTTGTGATTCTGTTCTATTTACAGACAGCGAGACACTGATATTCAGATGTTTACACTTGTCATGTTTGATGAGATGATTATCGATGGAATATATTCTTTCATT                               ]
[+] EMBL BI801162             [                                                                                                  atTCTCCGCCATCGTCGCCCTCCTCGC GTCAC GCC CCGCGCA GCCCCGGGAGCGGCCCCCGTCCC GCGCCCAAGAT GCCCCGCTGCCCGCTCCCCCGGCGAGGTCCCC GCCACCGCCCCCGCGCCGGTCGCCACCCCGCCCACCGCCGCGTCGCCGTCCCCCATGGCGTCTCCACCGGCCCCGCCCACTGACGCCCCCGCCGCC ATGCCCCCTCCGCCGTCACCCCGTCCGCGGTCACCCCCTCCTCCGTCTCCGCCCCGACCGGCGCCCCCGCTGCCTCCTCCACGTACACCGCCACCGCCAGCTTCGTTGCCGTCGCCGGCGCGGTCGCC CCGCCATCGTGTTCTAGATGGATGGATGGATGATTTGATCGACGCGTTGTTTATACGGCGAGATTCTTTTTTGTGATTCTGTTCTATTTACAGACAGCGAGACACTGATATTCAGATGTTTACACTTGTCATGTTTGATGAGATGATTATTGATGGAATATATTCTTTCATTTATTATTACCAAAAAAAAAA           ]
[+] EMBL CA755440             [                                                                                                                                                                                                                                            CACCCCGCCCACCGCCGCGTCGCCGTCCCCCATGGCGTCTCCACCGGCCCCGCCCACTGACGCCCCCGCCGCCAATGCCCCCTCCGCCGTCACCCCGTCCGCGGTCACCCCCTCCTCCGTCTCCGCCCCGACCGGCGCCCCCGCTGCCTCCTCCACGTACACCGCCACCGCCAGCTTCGTTGCCGTCGCCGGCGCGGTCGCCGCCGCCATCGTGTTCTAGATGGATGGATGGATGATTTGATCGACGCGTTGTTTATACGGCGAGATTCTTTTTTGTGATTCTGTTCTATTTACAGACAGCGAGACACTGATATTCAGATGTTTACACTTGTCATGTTTGATGAGATGATTATCGATGGAATATATTCTTTCATTTATTATTACCAANNNNNANNNNNNNANNNAA]




>consensus_5149#0
CATCGGCATCTTCTCACACTCTAGCTCACAGCTTCGCGGTTTCCACGCACTTGAAAACTC
ACGTTTCCAAGCCGGAAAACCATGGCTCGCTTCGCCGTAGTCGCCGCCATCGTCGCCCTC
CTCGCGGTCACGGCCGCCGCGCAGGCCCCGGGAGCGGCCCCCGTCCCGGCGCCCAAGATG
GCCCCGCTGCCCGCTCCCCCGGCGAGGTCCCCGGCCACCGCCCCCGCGCCGGTCGCCACC
CCGCCCACCGCCGCGTCGCCGTCCCCCATGGCGTCTCCACCGGCCCCGCCCACTGACGCC
CCCGCCGCCAATGCCCCCTCCGCCGTCACCCCGTCCGCGGTCACCCCCTCCTCCGTCTCC
GCCCCGACCGGCGCCCCCGCTGCCTCCTCCACGTACACCGCCACCGCCAGCTTCGTTGCC
GTCGCCGGCGCGGTCGCCGCCGCCATCGTGTTCTAGATGGATGGATGGATGATTTGATCG
ACGCGTTGTTTATACGGCGAGATTCTTTTTTGTGATTCTGTTCTATTTACAGACAGCGAG
ACACTGATATTCAGATGTTTACACTTGTCATGTTTGATGAGATGATTATCGATGGAATAT
ATTCTTTCATTTATTATTACCAAAAAAAAAANNNNNANNNAA

clustalw multiple alignements is not computed in this case