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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5226 cluster # 5226       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5226#0 length = 726 sequences # 3  

consensusID : consensus_5226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 726
fasta sequence
                              [CCGTGGTGGTGTCGCCGGCGAGCGGGCAGGTGGCGACGTCGTGCACGGCGTCGCTGATAACGACGTTCACGCCGTGCCTCAACTTCGTGACGGGGAGCACCAACGGCGGCGGGTCGCCGACGCAGCAGTGCTGC-GGGTCGCTGGCGGAGATGGTGCGCAGCAGCGCCGACTGCGCCTGCCTCATCCTCACCGGCAACGTGCCCTTCAGCCTCCCCATCAACCGCAACCTCGCCATCTCCCTCACCAAGCTCTGCAACT-CCATGTCCGTCCCACTGCAGTGCAGAGA-TACTGCAAGCCAAATCCCACCTCCAGGACCTGTTGCATTTGCTCCGGCACTGCCTCCTTTGCCACCATCGCCGCCGGAAACGTCAGTGCAGCCGAATTCGGCCGTTGATCCCACGGCGATGTCGCCGTCGCCGCC-GATCATCCAGGGGCAGAGGCCACTGTTGCTGCCAAGCTCCGCGTGGAGGAGAGCTCATGTGTCCATGGCGTCTGTATCAGTAGTGCTACTGATAGCTTGC-TCCG-TTTGGCTTGATTAGGATGAATTGAACTGGGATTGTTTTAGCACAGGAATTTGAGGCGTGTTCAGTGTATTGCACATATTTATTTAGCCTTTGGAATTGCACAGGATTCTTGTAAGAAAATTTTGAGGGCTTTGAGTTGATTGTGTAATATAATCATTCCTTGTGGATTAAAAAAATGTTGGTATAAATTTGTCTAAAAAAA]

[+] EMBL CA754644             [CCGTGGTGGTGTCGCCGGCGAGCGGGCAGGTGGCGACGTCGTGCACGGCGTCGCTGATAACGACGTTCACGCCGTGCCTCAACTTCGTGACGGGGAGCACCAACGGCGGCGGGTCGCCGACGCAGCAGTGCTGC GGGTCGCTGGCGGAGATGGTGCGCAGCAGCGCCGACTGCGCCTGCCTCATCCTCACCGGCAACGTGCCCTTCAGCCTCCCCATCAACCGCAACCTCGCCATCTCCCTCACCAAGCTCTGCAACT CCATGTCCGTCCCACTGCAGTGCAGAGA TACTGCAAGCCAAATCCCACCTCCNGGACCTGTTGCATTTGCTCCGGCACTGCCTCCTTTGCCACCATCGCCGCCGGAAACGTCAGTGCAGCCGAATTCGGCCGTTGATCCCACGGCGATGTCGCCGTCGCCGCC GATCATCCAGGGGCAGAGGCCACTGTTGCTGCCAAGCTCCGCGTGGAGGAGAGCTCATGTGTCCATGGCGTCTGTATCAGTAGTGCTACTGATAGCTTGC TCCG TTTGGCTTGATTAGGATGAATTG                                                                                                                                                                                  ]
[+] EMBL AU090567             [CCGTGGTGGTGTCGCCGGCGAGCGGGCAGGTGGCGACGTCGTGCACGGCGTCGCTGATAACGACGTTCACGCCGTGCCTCAACTTCGTGACGGGGAGCACCAACGGCGGCGGGTCGCCGACGCAGCAGTGCTGCGGGGTCGCTGGCGGAGATGGTGCGCA CAGCGCCGACTGCGCCTGCCTCATCCTCACCGGCAACGTGCCCTTCAGCCTCCCCATCAACCGCAACCTCGCCATCTCCCTCACCAAGCTCTGCAACTCCCATGTCCGTCCCACTGCAGTGCAGAGATTACTGCAAGCCAAATCCCACCTCCAGGANCTGTTGCATTTGCTCCGGCACTGCCTCCTTTGCCACCATCGCCGCCGGAAACGTCAGTGNAGCCGAATTCGGCCGTTGATCCCACGGCGATGTCGCCGTCGCCGCCGGATCATCCAAGGGNAGAGGCCACT                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU090568             [                                                                                                                                                                                                                                                                                               A TACTGNAAGCCAAATCCCACCTCCAGGACCTGTTGCATTTGCTCCGGCACTGCCTCCTTTGCCACCATCGCCNCCGGAAACGTCAGTGCANCCGAATTCGGCCNTTGATCCCACGGCGATGTCNCCGTCGCCGCC GATCATCCNGGGGCAGAGGCCACTGTTGCTGCCAAGCTCCGCGTGGAGGAGAGCTCATGTGTCCATGGCGTCTGTATCAGTAGTGCTACTGATAGC TGCATCCGTTTTGGCTTGATTAGGATGAATTGAACTGGGATTGTTTTAGCACAGGAATTTGAGGCGTGTTCAGTGTATTGCACATATTTATTTAGCCTTTGGAATTGCACAGGATTCTTGTAAGAAAATTTTGAGGGCTTTGAGTTGATTGTGTAATATAATCATTCCTTGTGGATTAAAAAAATGTTGGTATAAATTTGTCTAAAAAAA]


>consensus_5226#0 CCGTGGTGGTGTCGCCGGCGAGCGGGCAGGTGGCGACGTCGTGCACGGCGTCGCTGATAA CGACGTTCACGCCGTGCCTCAACTTCGTGACGGGGAGCACCAACGGCGGCGGGTCGCCGA CGCAGCAGTGCTGCGGGTCGCTGGCGGAGATGGTGCGCAGCAGCGCCGACTGCGCCTGCC TCATCCTCACCGGCAACGTGCCCTTCAGCCTCCCCATCAACCGCAACCTCGCCATCTCCC TCACCAAGCTCTGCAACTCCATGTCCGTCCCACTGCAGTGCAGAGATACTGCAAGCCAAA TCCCACCTCCAGGACCTGTTGCATTTGCTCCGGCACTGCCTCCTTTGCCACCATCGCCGC CGGAAACGTCAGTGCAGCCGAATTCGGCCGTTGATCCCACGGCGATGTCGCCGTCGCCGC CGATCATCCAGGGGCAGAGGCCACTGTTGCTGCCAAGCTCCGCGTGGAGGAGAGCTCATG TGTCCATGGCGTCTGTATCAGTAGTGCTACTGATAGCTTGCTCCGTTTGGCTTGATTAGG ATGAATTGAACTGGGATTGTTTTAGCACAGGAATTTGAGGCGTGTTCAGTGTATTGCACA TATTTATTTAGCCTTTGGAATTGCACAGGATTCTTGTAAGAAAATTTTGAGGGCTTTGAG TTGATTGTGTAATATAATCATTCCTTGTGGATTAAAAAAATGTTGGTATAAATTTGTCTA AAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)