These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5247#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 604 fasta sequence [CGTCGCCTATGAGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTGCCCTGGGACATGTTCATCTCTTCTTGCAAGAAGCTGCGGATAATGCGAGGATCTGAGGCGAGATGATATATATCGAAATCGAAAGGCGTCGAGCTGAAGAAAAAATTTTCGCCGATGCATGCATGGAGTAGACATCTCACAGAAAAAAGGCTTCATGCATGAGAGAGATGAGATCTATCCGTGGACATCGTCATGCATGGCGA-TCGGACGGCTGGCCAAGAAGGACACTTACACGTGGATGCATCTTGTTTTTGTTCTACGTAGATGTGTAGATGAGATATCCAAGGATCTGAATTCTAAAAAAGTTCAGGATTCAGTTGGATCGGAGTTGGTGAGGAGGAGGATATGATCGATCGAGCAGAGCTGCAGTACTCCTATGTACAGAATAATCTAGCTGAGATTTTGG--TTGTTGGAAATGGCAACTGCTAGTTCTGCAGATTTGTGTACACATGCCTTTTTTTTAAAGC-TTTTTTTTT-CTAGCTTCTGTTGTGTCACTGAAGAAATCTGAGAGCTGAAGAAAGAGAAACTTGGAAGTTTGGTCAAAAAAAAAAAAAA] [+] EMBL AK059619 [CGTCGCCTATGAGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTGCCCTGGGACATGTTCATCTCTTCTTGCAAGAAGCTGCGGATAATGCGAGGATCTGAGGCGAGATGATATATATCGAAATCGAAAGGCGTCGAGCTGAAGAAAAAATTTTCGCCGATGCATGCATGGAGTAGACATCTCACAGAAAAAAGGCTTCATGCATGAGAGAGATGAGATCTATCCGTGGACATCGTCATGCATGGCGA TCGGACGGCTGGCCAAGAAGGACACTTACACGTAGATGCATCTTGTTTTTGTTCTACGTAGATGTGTAGATGAGATATCCAAGGATCTGAATTCTAAAAAAGTTCAGGATTCAGTTGGATCGGAGTTGGTGAGGAGGAGGATATGATCGATCGAGCAGAGCTGCAGTACTCCTATGTACAGAATAATCTAGCTGAGATTTTGG TTGTTGGAAATGGCAACTGCTAGTTCTGCAGATTTGTGTACACATGCCTTTTTTTTAAAGC TTTTTTTTT CTAGCTTCTGTTGTGTCACTGAAGAAATCTGAGAGCTGAAGAAAGAGAAACTTGG ] [+] EMBL AU030061 [ cgGGCGTCGAGCTGAAGAAAAAATTTTCGCCGATGCATGCATGGAGTAGACATCTCACAGAAAAAAGGCTTCATGCATGAGAGAGATGAGATCTATCCGTGGACATCGTCATGCATGGCGATTCGGACGGCTGGCCAAGAAGGACACTTACACGTGGATGCATCTTGTTTTTGTTCTACGTAGATGTGTAGATGAGATATCCAAGGATCTGAATTCTAAAAAAGTTCAGGATTCAGTTGGATCGGAGTTGGTGAGGAGGAGGATATGATCGATCGAGCAGAGCTGCAGTACTCCTATGTACAGAATAATCTAGCTGAGATTTTGG TTGTTGGAAATGGCAACTGCTAGTTCTGCAGATTTGTGTACACATGCCTTTTTTTTAAAGCTTTTTTTTTT CTAGCTTCTGTTGTGTCACTGAAGAAATCTGAGAGCTGAAGAAAGAGAAACTTGGAAGTTTGGTCAAAAAAAAAAAAAA] [+] EMBL AU065613 [ CTGAAGAAAAAATTTTCGCCGATGCATGCATGGAGTAGACATCTCACAGAAAAAAGGCTTCATGCATGAGAGAGATGAGATCTATCCGTGGACATCGTCATGCATGGCGA TCGGACGGCTGGCCAAGAAGGACACTTACACGTGGATGCATCTTGTTTTTGTTCTACGTAGATGTGTAGATGAGATATCCAAGGATCTGAATTCTAAAAAAGTTCAGGATTCAGTTGGATCGGAGTTGGTGAGGAGGAGGATATGATCGATCGAGCAGAGCTGCAGTACTCCTATGTACAGAATAATCTAGCTGAGATTTTGGGTTTGTTGGGAATGGGCACTGCTAGTTCTGCAGATTTGTGT NNCATGCCTTTTTTTTNAAGC TTTTTTTTTCCTAGCTCCTGTTG GGCNCTGAAGAATCCTGAGANCTGAAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||