cluster # 5253

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Oryza sativa
cluster # 5253 cluster # 5253 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5253#0 length = 491 sequences # 3

consensusID : consensus_5253#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 491
fasta sequence

                              [GAATAAGNCTTGGGGCCGCTCCAACATCAGAATGGGAGACGGTTTGCGATGCGAGTATAATTATGCAGAAAGGACCCTGGGGCTAGGAGGCAGGGAGTGGAAGGGGCAGGAGAACGGGCGGCGCCGACGAGGGCAGCAGCGGCGAGCGGCAGAGAGGGCAGGTGCGGTGGCCGTGGTGGGCCCAGGCGTCGAGGCAGGCGCGGTGGAAGACGTGGCGGCAGCGGTGGGCGCGGCGCACCTGGGCGGACTTGTGGAAGTCGCGGAGGCAGACGGCGCAGGTGGCGACGTGGAGCGGCGGCTGCAGGGATGATGAGAGCGCGTCGAAGCGCAGCGCCGGGGAGTGGTCGTCCAGCTCCANCAGCTGGGACGACTGGGAGCTGTAGCTGTAGCTGCCGTCATATTCGGCGTCGACGGCGGTTGGGGAGTCGTCGATGTCGGCGCCGGCGAGGCGGATCTGGCAGGAGGAGAGGCGGCGGAGGTGGGTGAGGAGG]

[+] EMBL BI306273             [GAATAAGNCTTGGGGCCGCTCCTACATCAGAATGGGAGACGGTTTGCGATGCGAGTATAATTATGCAGAAAGGACCCTGGGGCTAGGAGGCAGGGAGTGGAAGGGGCAGGAGAACGGGCGGCGCCGACGAGGGCAGCAGCGGCGAGCGGCAGAGAGGGCAGGTGCGGTGGCCGTGGTGGGCCCAGGCGTCGAGGCAGGCGCGGTGGAAGACGTGGCGGCAGCGGTGGGCGCGGCGCACCTGGGCGGACTTGTGGAAGTCGCGGAGGCAGACGGCGCAGGTGGCGACGTGGAGCGGCGGCTGCAGGGATGATGAGAGCGCGTCGAAGCGCAGCGCCGGGGAGTGGTCGTCCAGCTCCANCAGCTGGGACGACTGGGAGCTGTAGCTGTAGCTGCCGTCATATTCGGCGTCGACGGCGGTTGGGGAGTCGTCGATGTCGGCGCCGGCGAGGCGGATCTGGCAGGAGGAGAGGCGGCGGAGGTGGG        ]
[+] EMBL BI306078             [    AAGNCTTTGGGCCGCTCCAACATCAGAATGGGAGACGGTTTGCGATGCGAGTATAATTATGCAGAAAGGACCCTGGGGCTAGGAGGCAGGGAGTGGAAGGGGCAGGAGAACGGGCGGCGCCGACGAGGGCAGCAGCGGCGAGCGGCAGAGAGGGCAGGTGCGGTGGCCGTGGTGGGCCCAGGCGTCGAGGCAGGCGCGGTGGAAGACGTGGCGGCAGCGGTGGGCGCGGCGCACCTGGGCGGACTTGTGGAAGTCGCGGAGGCAGACGGCGCAGGTGGCGACGTGGAGCGGCGGCTGCAGGGATGATGAGAGCGCGTCGAAGCGCAGCGCCGGGGAGTGGTCGTCCAGCTCCAGCAGCTGGGACGACTGGGAGCTGTAGCTGTAGCTGCCGTCATATTCGGCGTCGACGGCGGTTGGGGAGTCGTCGATGTCGGCGCCGGCGAGGCGGAGCAGGCAGGAGGAGAGGCGGCGGAGGTGGGTGAGGAGG]
[+] EMBL BI306275             [      agCTTGNGGCCGCTCCAACATCAGAATGGGAGACGGTTTGCGATGCGAGTATAATTATGCAGAAAGGACCCTGGGGCTAGGAGGCAGGGAGTGGAAGGGGCAGGAGAACGGGCGGCGCCGACGAGGGCAGCAGCGGCGAGCGGCAGAGAGGGCAGGTGCGGTGGCCGTGGTGGGCCCAGGCGTCGAGGCAGGCGCGGTGGAAGACGTGGCGGCAGCGGTGGGCGCGGCGCACCTGGGCGGACTTGTGGAAGTCGCGGAGGCAGACGGCGCAGGTGGCGACGTGGAGCGGCGGCTGCAGGGATGATGAGAGCGCGTCGAAGCGCAGCGCCGGGGAG                                                                                                                                                      ]




>consensus_5253#0
GAATAAGNCTTGGGGCCGCTCCAACATCAGAATGGGAGACGGTTTGCGATGCGAGTATAA
TTATGCAGAAAGGACCCTGGGGCTAGGAGGCAGGGAGTGGAAGGGGCAGGAGAACGGGCG
GCGCCGACGAGGGCAGCAGCGGCGAGCGGCAGAGAGGGCAGGTGCGGTGGCCGTGGTGGG
CCCAGGCGTCGAGGCAGGCGCGGTGGAAGACGTGGCGGCAGCGGTGGGCGCGGCGCACCT
GGGCGGACTTGTGGAAGTCGCGGAGGCAGACGGCGCAGGTGGCGACGTGGAGCGGCGGCT
GCAGGGATGATGAGAGCGCGTCGAAGCGCAGCGCCGGGGAGTGGTCGTCCAGCTCCANCA
GCTGGGACGACTGGGAGCTGTAGCTGTAGCTGCCGTCATATTCGGCGTCGACGGCGGTTG
GGGAGTCGTCGATGTCGGCGCCGGCGAGGCGGATCTGGCAGGAGGAGAGGCGGCGGAGGT
GGGTGAGGAGG

clustalw multiple alignements is not computed in this case